TomoSeq data search

Data search

Results for MligTC455_37486

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37486	0	0.00	Mlig455_048692	Neo: Irradiation Age: Up-Down-Up	RAD50	Mlig455_048692 {REF} {Length: 4923} {TRANSSPLICED} {Pfam: AAA domain [PF13476.8, score=96.2]; AAA ATPase domain [PF13175.8, score=25.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=23.0]; Designed helical repeat protein 10 domain [PF18595.3, score=19.4]} {Human: ENSG00000113522, RAD50, RAD50 double strand break repair protein, [Score=311, Expect=3e-86]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=318, Expect=2e-88]} {Dmel: FBgn0034728, rad50, [Score=190, Expect=2e-48]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [Score=135, Expect=2e-31]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [RH, Score=296, Expect=5e-82]} {RNA1509_17196} {RNA1310_1701} {RNA815_15702}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37486

0.00

Mlig455_048692

Neo: Irradiation

Age: Up-Down-Up

RAD50

Mlig455_048692 {REF} {Length: 4923} {TRANSSPLICED} {Pfam: AAA domain [PF13476.8, score=96.2]; AAA ATPase domain [PF13175.8, score=25.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=23.0]; Designed helical repeat protein 10 domain [PF18595.3, score=19.4]} {Human: ENSG00000113522, RAD50, RAD50 double strand break repair protein, [Score=311, Expect=3e-86]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=318, Expect=2e-88]} {Dmel: FBgn0034728, rad50, [Score=190, Expect=2e-48]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [Score=135, Expect=2e-31]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [RH, Score=296, Expect=5e-82]} {RNA1509_17196} {RNA1310_1701} {RNA815_15702}

Cumulative graph for MligTC455_37486

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_37486

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation