Data search


search
Exact
Search

Results for MligTC455_39634

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39634 1 0.02 Mlig455_010375, Mlig455_046117

Neo: -

Age: -

NYNRIN

Mlig455_010375 {REF} {Length: 2768} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=88.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=83.7]; Integrase zinc binding domain [PF17921.3, score=53.8]; Integrase core domain [PF00665.28, score=30.0]; H2C2 zinc finger [PF09337.12, score=21.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.8, Expect=9e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.5, Expect=1e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=303, Expect=2e-88]} {RNA1509_24311} {RNA1310_27350} {RNA815_49943}

Mlig455_046117 {REF} {Length: 3548} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=60.0]; Integrase zinc binding domain [PF17921.3, score=50.3]; Integrase core domain [PF00665.28, score=45.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=21.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=72.0, Expect=5e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.0, Expect=1e-10]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=241, Expect=1e-68]} {RNA1509_24311} {RNA1310_18657.1} {RNA815_49943}

Cumulative graph for MligTC455_39634

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_39634

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA