TomoSeq data search

Data search

Results for MligTC455_43182

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43182	0	0	Mlig455_058494	Neo: - Age: -	GABRG2	Mlig455_058494 {REF} {Length: 2322} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=18.6]} {Human: ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=62.8, Expect=1e-09]; ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=61.6, Expect=9e-10]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=63.9, Expect=4e-10]; ENSMUSG00000020436, Gabrg2, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2, [Score=62.4, Expect=1e-09]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=49.3, Expect=9e-06]} {Smed: dd_Smed_v6_10171_0_2, dd_Smed_v6_10171_0_2, [Score=397, Expect=2e-129]} {RNA1509_31476} {RNA1310_7448.1} {RNA815_6894}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43182

Mlig455_058494

Neo: -

Age: -

GABRG2

Mlig455_058494 {REF} {Length: 2322} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=18.6]} {Human: ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=62.8, Expect=1e-09]; ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=61.6, Expect=9e-10]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=63.9, Expect=4e-10]; ENSMUSG00000020436, Gabrg2, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2, [Score=62.4, Expect=1e-09]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=49.3, Expect=9e-06]} {Smed: dd_Smed_v6_10171_0_2, dd_Smed_v6_10171_0_2, [Score=397, Expect=2e-129]} {RNA1509_31476} {RNA1310_7448.1} {RNA815_6894}

Cumulative graph for MligTC455_43182

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_43182

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation