TomoSeq data search

Data search

Results for MligTC455_47609

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47609	1	0.02	Mlig455_045316	Neo: - Age: Up-Down-Down	SCN11A	Mlig455_045316 {REF} {Length: 7046} {Pfam: Ion transport protein [PF00520.33, score=772.5]; Polycystin cation channel [PF08016.14, score=56.0]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=22.6]} {Human: ENSG00000168356, SCN11A, sodium voltage-gated channel alpha subunit 11, [RH, Score=1093, Expect=0.0]} {Mouse: ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [RH, Score=1217, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=304, Expect=3e-83]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_26911} {RNA1310_844} {RNA815_9810}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47609

0.02

Mlig455_045316

Neo: -

Age: Up-Down-Down

SCN11A

Mlig455_045316 {REF} {Length: 7046} {Pfam: Ion transport protein [PF00520.33, score=772.5]; Polycystin cation channel [PF08016.14, score=56.0]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=22.6]} {Human: ENSG00000168356, SCN11A, sodium voltage-gated channel alpha subunit 11, [RH, Score=1093, Expect=0.0]} {Mouse: ENSMUSG00000034533, Scn10a, sodium channel, voltage-gated, type X, alpha, [RH, Score=1217, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=304, Expect=3e-83]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_26911} {RNA1310_844} {RNA815_9810}

Cumulative graph for MligTC455_47609

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_47609

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation