TomoSeq data search

Data search

Results for MligTC455_52511

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52511	21	0.45	Mlig455_063993	Neo: - Age: -	PCDH9	Mlig455_063993 {REF} {Length: 4418} {Pfam: Cadherin domain [PF00028.19, score=276.6]; Cadherin-like [PF16184.7, score=39.0]; Cadherin-like [PF08266.14, score=24.4]; Long Rib domain [PF18957.2, score=21.1]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=303, Expect=3e-85]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=293, Expect=2e-81]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=293, Expect=9e-82]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=302, Expect=6e-86]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=291, Expect=5e-81]} {Dmel: FBgn0284247, ds, dachsous, [Score=264, Expect=1e-71]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=202, Expect=2e-52]} {Smed: dd_Smed_v6_18373_0_1, dd_Smed_v6_18373_0_1, [RH, Score=364, Expect=2e-107]} {RNA1509_44488} {RNA1310_10484} {RNA815_20134}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52511

0.45

Mlig455_063993

Neo: -

Age: -

PCDH9

Mlig455_063993 {REF} {Length: 4418} {Pfam: Cadherin domain [PF00028.19, score=276.6]; Cadherin-like [PF16184.7, score=39.0]; Cadherin-like [PF08266.14, score=24.4]; Long Rib domain [PF18957.2, score=21.1]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=303, Expect=3e-85]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=293, Expect=2e-81]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=293, Expect=9e-82]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=302, Expect=6e-86]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=291, Expect=5e-81]} {Dmel: FBgn0284247, ds, dachsous, [Score=264, Expect=1e-71]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=202, Expect=2e-52]} {Smed: dd_Smed_v6_18373_0_1, dd_Smed_v6_18373_0_1, [RH, Score=364, Expect=2e-107]} {RNA1509_44488} {RNA1310_10484} {RNA815_20134}

Cumulative graph for MligTC455_52511

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.471	0.719	1.00000	1.00000
RegionR2	-2.441	0.719	0.99991	1.00000
RegionR3	-0.108	0.719	1.00000	1.00000
RegionR4	4.389	0.719	0.99979	1.00000
RegionR5	1.327	0.719	0.99983	1.00000
RegionR6	-0.117	0.719	0.99991	1.00000
RegionR7	-1.165	0.719	0.99988	1.00000
RegionR8	-1.415	0.719	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.639	0.719	0.99994	1.00000
RegenerationR2	3.457	0.719	0.06828	0.42614
RegenerationR3	1.686	0.719	0.51499	0.86448
RegenerationR4	0.595	0.719	0.66295	0.93900
RegenerationR5	0.822	0.719	0.58994	0.90565
RegenerationR6	2.252	0.719	0.26615	0.61598
RegenerationBL	2.787	0.719	0.32324	0.69009
RegenerationTP	2.841	0.719	0.39816	0.82778

Genes with expression patterns similar to MligTC455_52511

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation