TomoSeq data search

Data search

Results for MligTC455_56487

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_56487	11	0.23	Mlig455_067774	Neo: - Age: -	COL4A6	Mlig455_067774 {REF} {Length: 3533} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=56.5]} {Human: ENSG00000197565, COL4A6, collagen type IV alpha 6 chain, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=109, Expect=8e-24]; ENSMUSG00000116510, Col4a6, collagen, type IV, alpha 6, [Score=105, Expect=2e-22]; ENSMUSG00000031273, Col4a6, collagen, type IV, alpha 6, [Score=105, Expect=2e-22]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=117, Expect=2e-26]} {Celegans: WBGene00002280, let-2, Collagen alpha-2(IV) chain, [Score=77.4, Expect=3e-14]} {Smed: dd_Smed_v6_740_0_2, dd_Smed_v6_740_0_2, [Score=145, Expect=1e-35]} {RNA1509_16318} {RNA1310_12931} {RNA815_53824}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_56487

0.23

Mlig455_067774

Neo: -

Age: -

COL4A6

Mlig455_067774 {REF} {Length: 3533} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=56.5]} {Human: ENSG00000197565, COL4A6, collagen type IV alpha 6 chain, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=109, Expect=8e-24]; ENSMUSG00000116510, Col4a6, collagen, type IV, alpha 6, [Score=105, Expect=2e-22]; ENSMUSG00000031273, Col4a6, collagen, type IV, alpha 6, [Score=105, Expect=2e-22]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=117, Expect=2e-26]} {Celegans: WBGene00002280, let-2, Collagen alpha-2(IV) chain, [Score=77.4, Expect=3e-14]} {Smed: dd_Smed_v6_740_0_2, dd_Smed_v6_740_0_2, [Score=145, Expect=1e-35]} {RNA1509_16318} {RNA1310_12931} {RNA815_53824}

Cumulative graph for MligTC455_56487

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_56487

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation