TomoSeq data search

Data search

Results for MligTC455_56689

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_56689	0	0	Mlig455_040795	Neo: - Age: -	NYNRIN	Mlig455_040795 {REF} {Length: 2447} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.8]; Integrase zinc binding domain [PF17921.3, score=47.1]; Integrase core domain [PF00665.28, score=42.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.2]; H2C2 zinc finger [PF09337.12, score=21.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=70.5, Expect=1e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=2e-11]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=150, Expect=2e-40]} {RNA1509_24311} {RNA1310_40780}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_56689

Mlig455_040795

Neo: -

Age: -

NYNRIN

Mlig455_040795 {REF} {Length: 2447} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.8]; Integrase zinc binding domain [PF17921.3, score=47.1]; Integrase core domain [PF00665.28, score=42.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.2]; H2C2 zinc finger [PF09337.12, score=21.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=70.5, Expect=1e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=2e-11]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=150, Expect=2e-40]} {RNA1509_24311} {RNA1310_40780}

Cumulative graph for MligTC455_56689

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_56689

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation