TomoSeq data search

Data search

Results for MligTC455_57733

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_57733	2	0.05	Mlig455_037859	Neo: - Age: -	COL4A1	Mlig455_037859 {REF} {Length: 645} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=32.8]} {Human: ENSG00000187498, COL4A1, collagen type IV alpha 1 chain, [Score=57.4, Expect=4e-09]; ENSG00000019169, MARCO, macrophage receptor with collagenous structure, [Score=57.0, Expect=4e-09]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=62.4, Expect=5e-11]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=50.4, Expect=4e-07]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=65.5, Expect=3e-12]} {Smed: dd_Smed_v6_2197_0_1, dd_Smed_v6_2197_0_1, [Score=59.3, Expect=3e-10]}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_57733

0.05

Mlig455_037859

Neo: -

Age: -

COL4A1

Mlig455_037859 {REF} {Length: 645} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=32.8]} {Human: ENSG00000187498, COL4A1, collagen type IV alpha 1 chain, [Score=57.4, Expect=4e-09]; ENSG00000019169, MARCO, macrophage receptor with collagenous structure, [Score=57.0, Expect=4e-09]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=62.4, Expect=5e-11]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=50.4, Expect=4e-07]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=65.5, Expect=3e-12]} {Smed: dd_Smed_v6_2197_0_1, dd_Smed_v6_2197_0_1, [Score=59.3, Expect=3e-10]}

Cumulative graph for MligTC455_57733

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_57733

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation