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Transcripts enriched in region R1:

Total: 6 (log2FC >= 1, FDR <= 0.01, other allowed enriched regions: no).


No. Cluster log2FC(R1/mean of other regions) R1 CPM Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
1. MligTC455_26554 18.984 1.43 93 1.93 Mlig455_034261

Neo: -

Age: -

Region-enriched R1: 18.984/0.00057

RRAGB Mlig455_034261 {REF} {Length: 1654} {TRANSSPLICED} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=350.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=38.2]; Ras family [PF00071.24, score=33.9]; ADP-ribosylation factor family [PF00025.23, score=31.9]; 50S ribosome-binding GTPase [PF01926.25, score=28.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.0]} {Human: ENSG00000083750, RRAGB, Ras related GTP binding B, [RH, Score=503, Expect=1e-180]; ENSG00000155876, RRAGA, Ras related GTP binding A, [RH, Score=502, Expect=0.0]} {Mouse: ENSMUSG00000070934, Rraga, Ras-related GTP binding A, [RH, Score=502, Expect=0.0]; ENSMUSG00000041658, Rragb, Ras-related GTP binding B, [RH, Score=491, Expect=7e-176]} {Dmel: FBgn0037647, RagA-B, Ras-related GTP binding A/B, [RH, Score=479, Expect=3e-172]} {Celegans: WBGene00006414, raga-1, RAs-related GTP-binding protein A, [RH, Score=427, Expect=9e-152]} {Smed: dd_Smed_v6_4388_0_1, dd_Smed_v6_4388_0_1, [RH, Score=435, Expect=1e-154]} {RNA1509_11083} {RNA1310_13012} {RNA815_15460}
2. MligTC455_50869 15.553 0.614 17 0.36 Mlig455_052613

Neo: -

Age: -

Region-enriched R1: 15.553/0.00937

Mlig455_052613 {REF} {Length: 1539} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=65.1, Expect=4e-12]} {RNA1509_57390} {RNA1310_80889} {RNA815_46554}
3. MligTC455_31935 6.31 2.373 299 6.24 Mlig455_046201

Neo: -

Age: -

Region-enriched R1: 6.310/0.00233

Mlig455_046201 {REF} {Length: 1782} {Pfam: RICH domain [PF05062.14, score=19.2]} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1}
4. MligTC455_46340 5.32 2.556 259 5.4 Mlig455_049774

Neo: -

Age: -

Region-enriched R1: 5.320/0.00375

Mlig455_049774 {REF} {Length: 1638} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=40.1]; Ankyrin repeats (many copies) [PF13637.8, score=27.8]; Ankyrin repeats (many copies) [PF13857.8, score=24.8]; Ankyrin repeat [PF13606.8, score=19.1]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [RH, Score=75.9, Expect=1e-14]} {RNA1509_39973} {RNA1310_21889} {RNA815_13094}
5. MligTC455_38086 3.659 5.801 3876 80.76 Mlig455_044474, Mlig455_046754

Neo: -

Age: Up-Down-Up

Region-enriched R1: 3.659/0.00863

ZNF347

Mlig455_044474 {REF} {Length: 431} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.7]} {RNA1509_7797} {RNA1310_1145} {RNA815_22627}

Mlig455_046754 {REF} {Length: 5818} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.8]; C2H2-type zinc finger [PF13894.8, score=73.9]; C2H2-type zinc finger [PF13912.8, score=39.9]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.3]} {Human: ENSG00000197937, ZNF347, zinc finger protein 347, [Score=81.3, Expect=8e-15]} {Mouse: ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=72.8, Expect=2e-12]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=70.9, Expect=8e-12]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=70.5, Expect=8e-12]} {Dmel: FBgn0028647, CG11902, [Score=57.8, Expect=7e-08]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=53.1, Expect=1e-06]} {RNA1509_7797} {RNA1310_1145} {RNA815_319.1}
6. MligTC455_16591 2.714 5.077 1447 30.14 Mlig455_062918, Mlig455_062920

Neo: Int S/G2/M

Age: -

Region-enriched R1: 2.714/0.00863

Mlig455_062918 {REF} {Length: 1371} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal subunit [PF10244.11, score=73.4]} {Mouse: ENSMUSG00000030335, Mrpl51, mitochondrial ribosomal protein L51, [RH, Score=56.6, Expect=4e-10]} {Dmel: FBgn0032053, mRpL51, mitochondrial ribosomal protein L51, [RH, Score=57.0, Expect=4e-10]} {Celegans: WBGene00011740, mrpl-51, 39S ribosomal protein L51, mitochondrial, [RH, Score=55.8, Expect=1e-09]} {Smed: dd_Smed_v6_5659_0_1, dd_Smed_v6_5659_0_1, [RH, Score=84.3, Expect=2e-20]} {RNA1509_22332, RNA1509_26822} {RNA1310_24127, RNA1509_22332, RNA1509_26822} {RNA1509_22332, RNA1509_26822, RNA815_17856}

Mlig455_062920 {REF} {Length: 1492} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal subunit [PF10244.11, score=73.4]} {Mouse: ENSMUSG00000030335, Mrpl51, mitochondrial ribosomal protein L51, [RH, Score=56.2, Expect=4e-10]} {Dmel: FBgn0032053, mRpL51, mitochondrial ribosomal protein L51, [RH, Score=57.0, Expect=4e-10]} {Celegans: WBGene00011740, mrpl-51, 39S ribosomal protein L51, mitochondrial, [RH, Score=55.8, Expect=1e-09]} {Smed: dd_Smed_v6_5659_0_1, dd_Smed_v6_5659_0_1, [RH, Score=84.3, Expect=2e-20]} {RNA1509_25815, RNA1509_26822, RNA1509_36945} {RNA1310_24127, RNA1509_25815, RNA1509_36945} {RNA1509_25815, RNA1509_36945, RNA815_17856}

Transcripts enriched in region R1:

Min logFC:    Max FDR:    Allowed other enriched regions (e.g, no, all, R1, R2 etc.):    Refine
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