Data search


search
Exact
Search

Results for MligTC455_00170

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_00170 8 0.16 Mlig455_065310

Neo: -

Age: -

Mlig455_065310 {REF} {Length: 1140} {NoTransDecoderORF}

Cumulative graph for MligTC455_00170

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_00170

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_00170 8 0.16 Mlig455_065310

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_065310 {REF} {Length: 1140} {NoTransDecoderORF}
2. MligTC455_53715 273 5.68 Mlig455_062009

Neo: Irradiation

Age: Up-Down-Down

GLTP 0.976 - - - - 0.976 - Mlig455_062009 {REF} {Length: 2450} {TRANSSPLICED} {Pfam: Glycolipid transfer protein (GLTP) [PF08718.13, score=100.1]} {Human: ENSG00000139433, GLTP, glycolipid transfer protein, [Score=67.4, Expect=5e-13]} {Mouse: ENSMUSG00000011884, Gltp, glycolipid transfer protein, [Score=68.9, Expect=1e-13]} {Dmel: FBgn0030641, CG6299, [Score=58.2, Expect=4e-10]} {Smed: dd_Smed_v6_2621_0_1, dd_Smed_v6_2621_0_1, [RH, Score=117, Expect=3e-32]} {RNA1509_14654, RNA1509_46995, RNA1509_57663} {RNA1310_18588.2, RNA1509_46995, RNA1509_57663} {RNA1509_46995, RNA1509_57663, RNA815_11536}
3. MligTC455_40944 28 0.59 Mlig455_063864

Neo: -

Age: -

0.973 - - - - 0.973 - Mlig455_063864 {REF} {Length: 279} {NoTransDecoderORF} {RNA1509_41236, RNA1509_51543} {RNA1310_39627, RNA1509_41236} {RNA1509_41236, RNA815_33289}
4. MligTC455_07119 20 0.41 Mlig455_011074

Neo: Irradiation

Age: -

TONSL 0.97 - - - - 0.970 - Mlig455_011074 {REF} {Length: 3533} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=65.1]; Ankyrin repeats (many copies) [PF13637.8, score=62.1]; Ankyrin repeat [PF13606.8, score=48.9]; Ankyrin repeats (many copies) [PF13857.8, score=41.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=37.9]; Ankyrin repeat [PF00023.32, score=37.7]; Leucine rich repeat [PF13855.8, score=27.2]; Leucine Rich repeat [PF13516.8, score=23.6]; Leucine Rich Repeat [PF00560.35, score=19.6]} {Human: ENSG00000285453, TONSL, tonsoku like, DNA repair protein, [RH, Score=93.6, Expect=1e-18]; ENSG00000160949, TONSL, tonsoku like, DNA repair protein, [RH, Score=93.6, Expect=1e-18]} {Mouse: ENSMUSG00000059323, Tonsl, tonsoku-like, DNA repair protein, [RH, Score=95.5, Expect=2e-19]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=61.2, Expect=5e-09]} {Celegans: WBGene00012704, mlt-3, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_15557_0_1, dd_Smed_v6_15557_0_1, [RH, Score=107, Expect=2e-23]} {RNA1509_10811} {RNA1310_6851, RNA1509_10811} {RNA1509_10811, RNA815_7512}
5. MligTC455_31625 130 2.7 Mlig455_069168

Neo: -

Age: Up-Down-Up

0.965 - - - - 0.965 - Mlig455_069168 {REF} {Length: 4740} {RNA1509_55535} {RNA1310_35152.1} {RNA815_5895}
6. MligTC455_07672 31 0.65 Mlig455_046827

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_046827 {REF} {Length: 804} {NoTransDecoderORF}
7. MligTC455_15986 139 2.9 Mlig455_048132

Neo: -

Age: -

Region-enriched R8: 5.016/0.00239
Region-enriched R7: 4.765/0.00007

0.959 - - - - 0.959 - Mlig455_048132 {REF} {Length: 1543} {RNA1509_47436} {RNA1310_22809.1} {RNA815_55300}
8. MligTC455_08220 262 5.46 Mlig455_040420, Mlig455_050466

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.762

Region-specific R4: 7.664

0.957 - - - - 0.957 -

Mlig455_040420 {REF} {Length: 872} {NoTransDecoderORF} {RNA1509_41535} {RNA1310_49483, RNA1509_41535} {RNA1509_41535, RNA815_27007}

Mlig455_050466 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_42782} {RNA1310_49483, RNA1509_42782} {RNA1509_42782, RNA815_27007}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA