M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_00571

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_00571 48 0.99 Mlig455_041749

Neo: -

Age: -

 Mlig455_041749 {REF} {Length: 249} {NoTransDecoderORF} {RNA1509_34657} {RNA1310_4716} {RNA815_4023.1}

Cumulative graph for MligTC455_00571

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.354 1.631 0.99994 1.00000
RegionR2 -0.085 1.631 0.83431 1.00000
RegionR3 2.922 1.631 0.15228 0.66070
RegionR4 5.806 1.631 0.00897 0.05621
RegionR5 -3.094 1.631 1.00000 1.00000
RegionR6 0.079 1.631 0.54365 1.00000
RegionR7 1.637 1.631 0.51086 1.00000
RegionR8 -3.91 1.631 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.206 1.631 0.99988 1.00000
RegenerationR2 0.45 1.631 0.93801 1.00000
RegenerationR3 -2.53 1.631 0.36607 0.78091
RegenerationR4 -3.729 1.631 0.14569 0.57162
RegenerationR5 1.648 1.631 0.44497 0.82773
RegenerationR6 -1.817 1.631 0.29254 0.64320
RegenerationBL -1.665 1.631 0.99994 1.00000
RegenerationTP -1.539 1.631 1.00000 1.00000


Genes with expression patterns similar to MligTC455_00571

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_00571 48 0.99 Mlig455_041749

Neo: -

Age: -

 4 1.000 1.000 1.000 - - 1.000 Mlig455_041749 {REF} {Length: 249} {NoTransDecoderORF} {RNA1509_34657} {RNA1310_4716} {RNA815_4023.1}
2. MligTC455_31927 52 1.09 Mlig455_068193

Neo: -

Age: -

Region-enriched R4: 3.790/0.04231

 3.446 0.819 0.896 0.774 - - 0.957 Mlig455_068193 {REF} {Length: 2308} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=121.9]} {Celegans: WBGene00019136, F59H6.5, [Score=147, Expect=3e-38]} {RNA1509_52720} {RNA1310_63836, RNA1509_52720} {RNA1509_52720, RNA815_1650.1}
3. MligTC455_39073 54 1.13 Mlig455_060146

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 5.421/0.00338

 2.686 0.882 0.962 - - - 0.842 Mlig455_060146 {REF} {Length: 1210} {Pfam: Tetraspanin family [PF00335.22, score=37.8]} {RNA1310_33145} {RNA815_11307}
4. MligTC455_10016 10 0.21 Mlig455_030286

Neo: Germline

Age: -

 2.649 0.973 0.899 0.777 - - - Mlig455_030286 {REF} {Length: 1128} {NoTransDecoderORF} {RNA1509_54801} {RNA1310_69954} {RNA815_42361}
5. MligTC455_03654 11 0.23 Mlig455_053752

Neo: Int S/G2/M

Age: -

 2.645 - 0.906 0.777 - - 0.962 Mlig455_053752 {REF} {Length: 1043} {RNA1509_47157} {RNA1310_21662} {RNA815_40940}
6. MligTC455_05558 34 0.71 Mlig455_019821

Neo: -

Age: logFC(26M/2M)=0.687

Region-enriched R4: 5.756/0.00061

 2.645 0.958 0.930 0.757 - - - Mlig455_019821 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1310_35019} {RNA815_8697}
7. MligTC455_04372 20 0.42 Mlig455_033371

Neo: -

Age: -

 GVQW3 2.615 0.897 0.954 - - - 0.764 Mlig455_033371 {REF} {Length: 1286} {Pfam: Homeodomain-like domain [PF13565.8, score=38.6]; HTH domain in Mos1 transposase [PF17906.3, score=26.6]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=85.5, Expect=2e-20]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=59.3, Expect=7e-12]} {RNA1310_29714} {RNA815_30628}
8. MligTC455_39299 81 1.69 Mlig455_051108

Neo: Irradiation

Age: -

Region-enriched R4: 4.841/0.00411

 2.605 - 0.966 0.895 - - 0.744 Mlig455_051108 {REF} {Length: 1637} {Pfam: Homeodomain-like domain [PF13384.8, score=22.7]} {Smed: dd_Smed_v6_65697_0_1, dd_Smed_v6_65697_0_1, [RH, Score=42.7, Expect=8e-07]} {RNA1509_36030} {RNA1310_33431.2} {RNA815_19695}
9. MligTC455_51583 215 4.49 Mlig455_014046

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.215

Region-enriched R4: 3.129/0.00053

Regeneration-downregulated R4: -2.879

Regeneration-depleted R4: -2.879

 TTLL10 2.599 0.891 0.750 - - - 0.958 Mlig455_014046 {REF} {Length: 2022} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=126.0]; YheC/D like ATP-grasp [PF14398.8, score=31.6]; Sugar-transfer associated ATP-grasp [PF14397.8, score=23.1]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=114, Expect=3e-26]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=119, Expect=6e-28]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=89.0, Expect=4e-18]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=73.9, Expect=6e-14]} {Smed: dd_Smed_v6_14858_0_1, dd_Smed_v6_14858_0_1, [Score=150, Expect=9e-40]} {RNA1509_25372, RNA1509_26935, RNA1509_51746} {RNA1310_25077, RNA1509_25372, RNA1509_51746} {RNA1509_25372, RNA1509_51746, RNA815_19019}
10. MligTC455_07817 87 1.81 Mlig455_008042

Neo: Germline

Age: -

 2.596 0.783 0.963 - - - 0.850 Mlig455_008042 {REF} {Length: 1040} {RNA1509_56901} {RNA1310_38278} {RNA815_20254}
11. MligTC455_42265 34 0.71 Mlig455_015790

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 5.124/0.02699

 2.595 0.866 0.950 - - - 0.779 Mlig455_015790 {REF} {Length: 1177} {RNA1509_57368} {RNA1310_24979.1, RNA1509_57368} {RNA1509_57368, RNA815_12703}
12. MligTC455_21285 105 2.19 Mlig455_004275

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 5.629

Region-enriched R4: 2.984/0.02089

 2.58 0.754 0.965 - - - 0.861 Mlig455_004275 {REF} {Length: 1941} {RNA1509_28807} {RNA1310_15297.1} {RNA815_30441}
13. MligTC455_39141 478 9.95 Mlig455_016842

Neo: Int S/G2/M

Age: Up-Down-Up

Region-specific R4: 6.544

Region-enriched R4: 3.819/0.00000

 KCNU1 2.577 0.950 0.816 - - - 0.811 Mlig455_016842 {REF} {Length: 2579} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=67.2]} {Human: ENSG00000215262, KCNU1, potassium calcium-activated channel subfamily U member 1, [Score=99.4, Expect=1e-20]} {Mouse: ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=63.2, Expect=1e-09]; ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=62.0, Expect=2e-09]} {Dmel: FBgn0003429, slo, slowpoke, [Score=95.9, Expect=7e-20]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=84.3, Expect=2e-16]} {Smed: dd_Smed_v6_17366_0_2, dd_Smed_v6_17366_0_2, [Score=133, Expect=4e-32]} {RNA1509_4621} {RNA1310_3199} {RNA815_675.1}
14. MligTC455_08092 133 2.78 Mlig455_046768, Mlig455_046820

Neo: Germline

Age: -

Region-specific R4: 7.835

Region-enriched R4: 4.470/0.00213

 SGMS2 2.557 0.957 0.732 - - - 0.868

Mlig455_046768 {REF} {Length: 1722} {Pfam: PAP2 superfamily C-terminal [PF14360.8, score=73.5]} {Human: ENSG00000164023, SGMS2, sphingomyelin synthase 2, [Score=179, Expect=8e-52]} {Mouse: ENSMUSG00000116143, Sgms2, sphingomyelin synthase 2, [Score=179, Expect=5e-52]; ENSMUSG00000050931, Sgms2, sphingomyelin synthase 2, [Score=179, Expect=5e-52]; ENSMUSG00000040451, Sgms1, sphingomyelin synthase 1, [Score=171, Expect=2e-48]} {Dmel: FBgn0052380, SMSr, [Score=148, Expect=4e-39]} {Celegans: WBGene00004892, sms-1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, [Score=175, Expect=3e-50]} {Smed: dd_Smed_v6_11976_0_2, dd_Smed_v6_11976_0_2, [Score=149, Expect=6e-41]} {RNA1509_24561} {RNA1310_14852} {RNA815_26241}

Mlig455_046820 {REF} {Length: 1740} {Pfam: PAP2 superfamily C-terminal [PF14360.8, score=73.8]} {Human: ENSG00000164023, SGMS2, sphingomyelin synthase 2, [Score=178, Expect=3e-52]} {Mouse: ENSMUSG00000116143, Sgms2, sphingomyelin synthase 2, [Score=178, Expect=2e-52]; ENSMUSG00000050931, Sgms2, sphingomyelin synthase 2, [Score=178, Expect=2e-52]; ENSMUSG00000040451, Sgms1, sphingomyelin synthase 1, [Score=171, Expect=7e-49]} {Dmel: FBgn0052380, SMSr, [Score=148, Expect=1e-39]} {Celegans: WBGene00004892, sms-1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, [Score=174, Expect=2e-50]} {Smed: dd_Smed_v6_11976_0_2, dd_Smed_v6_11976_0_2, [Score=149, Expect=2e-41]} {RNA1509_24561, RNA1509_35529} {RNA1310_14852, RNA1509_24561, RNA1509_35529} {RNA1509_24561, RNA1509_35529, RNA815_26241}
15. MligTC455_36195 47 0.97 Mlig455_020257

Neo: Irradiation

Age: -

Region-enriched R4: 6.754/0.00000

 2.555 0.852 0.964 - - - 0.739 Mlig455_020257 {REF} {Length: 1435} {Pfam: Domain of unknown function (DUF4419) [PF14388.8, score=72.6]} {RNA1509_22232} {RNA1310_24935, RNA1509_22232} {RNA1509_22232, RNA815_11803}
16. MligTC455_08425 12 0.25 Mlig455_026708

Neo: Irradiation

Age: -

 2.522 0.823 0.967 0.732 - - - Mlig455_026708 {REF} {Length: 3657} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=23.6]; Ankyrin repeat [PF00023.32, score=22.9]; Ankyrin repeat [PF13606.8, score=22.3]} {RNA1509_49335} {RNA1310_6702, RNA1509_49335} {RNA1509_49335, RNA815_17045}
17. MligTC455_32169 84 1.75 Mlig455_056563

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.298

Region-enriched R4: 5.746/0.00048

 RRBP1 2.515 0.706 0.826 - - - 0.983 Mlig455_056563 {REF} {Length: 3442} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=69.0]; Keratin, high sulfur B2 protein [PF01500.19, score=20.3]} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=133, Expect=2e-31]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=159, Expect=2e-40]} {RNA1509_20952} {RNA1310_36947} {RNA815_23300.1}
18. MligTC455_30201 49 1.02 Mlig455_006805

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.603

 SCNN1B 2.505 0.734 0.963 - - - 0.808 Mlig455_006805 {REF} {Length: 2461} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=193.3]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=54.7, Expect=3e-07]; ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=54.7, Expect=4e-07]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=58.2, Expect=2e-08]; ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_36956} {RNA1310_12232.1} {RNA815_4577.1}
19. MligTC455_31338 436 9.08 Mlig455_019988, Mlig455_027844, Mlig455_036853, Mlig455_040495, Mlig455_040496, Mlig455_051878, Mlig455_070985

Neo: -

Age: Up-Down-Down

Region-specific R4: 4.817

Region-enriched R4: 4.146/0.00029

 NYNRIN 2.488 0.714 0.961 - - - 0.813

Mlig455_019988 {REF} {Length: 2150} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.7]; Integrase core domain [PF13683.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=114, Expect=2e-26]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_027844 {REF} {Length: 2192} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.1]; Integrase core domain [PF00665.28, score=46.4]; Integrase core domain [PF13683.8, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=92.8, Expect=7e-19]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=112, Expect=7e-26]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_036853 {REF} {Length: 3565} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.7]; Integrase core domain [PF00665.28, score=46.0]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=2e-17]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=92.8, Expect=2e-18]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=127, Expect=2e-29]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_040495 {REF} {Length: 1109} {RNA1509_25498} {RNA1310_33494, RNA1509_25498} {RNA1509_25498, RNA815_15678.1}

Mlig455_040496 {REF} {Length: 4434} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.4]; Integrase zinc binding domain [PF17921.3, score=59.3]; Integrase core domain [PF00665.28, score=46.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=1e-21]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=1e-21]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=334, Expect=5e-97]} {RNA1509_18367} {RNA1310_1117.1, RNA1509_18367} {RNA1509_18367, RNA815_895.1}

Mlig455_051878 {REF} {Length: 2123} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]; Integrase core domain [PF00665.28, score=44.7]; Integrase core domain [PF13683.8, score=18.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=89.7, Expect=7e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=90.9, Expect=6e-19]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_070985 {REF} {Length: 3554} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.6]; Integrase core domain [PF00665.28, score=47.3]; Integrase core domain [PF13683.8, score=19.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=7e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=92.8, Expect=7e-19]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=113, Expect=3e-26]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}
20. MligTC455_27478 64 1.33 Mlig455_000927

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.278/0.00168

 LRP2 2.422 0.771 0.951 - - - 0.700 Mlig455_000927 {REF} {Length: 2875} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=191.2]} {Human: ENSG00000081479, LRP2, LDL receptor related protein 2, [Score=171, Expect=1e-44]} {Mouse: ENSMUSG00000027070, Lrp2, low density lipoprotein receptor-related protein 2, [Score=169, Expect=3e-44]} {Dmel: FBgn0261260, mgl, Megalin, [Score=146, Expect=9e-37]} {Celegans: WBGene00015083, egg-1, EGG sterile (Unfertilizable), [RH, Score=139, Expect=3e-35]} {Smed: dd_Smed_v6_9829_0_1, dd_Smed_v6_9829_0_1, [Score=90.9, Expect=4e-19]} {RNA1509_21286, RNA1509_2144, RNA1509_5344} {RNA1310_9519.2, RNA1509_21286, RNA1509_2144, RNA1509_5344} {RNA1509_21286, RNA1509_2144, RNA1509_5344, RNA815_3328.1}
21. MligTC455_10582 20 0.42 Mlig455_022645

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.447

 CRISPLD1 1.868 0.989 0.879 - - - - Mlig455_022645 {REF} {Length: 2338} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=44.1]} {Human: ENSG00000121005, CRISPLD1, cysteine rich secretory protein LCCL domain containing 1, [Score=63.5, Expect=3e-10]} {Mouse: ENSMUSG00000033633, Clec18a, C-type lectin domain family 18, member A, [Score=68.9, Expect=3e-12]; ENSMUSG00000025776, Crispld1, cysteine-rich secretory protein LCCL domain containing 1, [Score=67.0, Expect=2e-11]} {Celegans: WBGene00022638, scl-27, SCP-Like extracellular protein, [RH, Score=54.3, Expect=2e-08]} {Smed: dd_Smed_v6_11014_0_1, dd_Smed_v6_11014_0_1, [Score=67.0, Expect=1e-12]} {RNA1509_28284} {RNA1310_17596} {RNA815_6912}
22. MligTC455_06041 29 0.6 Mlig455_018028

Neo: Germline

Age: Up-Down-Down

 1.856 - 0.898 - - - 0.958 Mlig455_018028 {REF} {Length: 1029} {RNA1310_49697.1} {RNA815_45512}
23. MligTC455_03947 45 0.93 Mlig455_008448, Mlig455_031362

Neo: -

Age: -

 1.846 - 0.966 - - - 0.880

Mlig455_008448 {REF} {Length: 538} {NoTransDecoderORF} {RNA1310_69781} {RNA815_48064}

Mlig455_031362 {REF} {Length: 838} {NoTransDecoderORF} {RNA1310_69781} {RNA815_48064}
24. MligTC455_12518 11 0.22 Mlig455_023552

Neo: -

Age: -

 1.824 0.873 0.951 - - - - Mlig455_023552 {REF} {Length: 673} {RNA1509_22223} {RNA1310_60769} {RNA815_31256}
25. MligTC455_07702 51 1.05 Mlig455_061785

Neo: -

Age: -

 1.819 - 0.957 - - - 0.862 Mlig455_061785 {REF} {Length: 694} {RNA1509_42781} {RNA1310_53468.1} {RNA815_41884}
26. MligTC455_50998 6 0.13 Mlig455_002217

Neo: -

Age: -

 TRIM71 1.819 0.868 0.951 - - - - Mlig455_002217 {REF} {Length: 6131} {Pfam: NHL repeat [PF01436.23, score=75.8]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=81.3, Expect=2e-15]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=80.5, Expect=2e-15]} {Dmel: FBgn0265356, tn, thin, [Score=95.5, Expect=3e-20]} {Celegans: WBGene00003026, lin-41, [Score=80.5, Expect=1e-15]} {Smed: dd_Smed_v6_13659_0_1, dd_Smed_v6_13659_0_1, [RH, Score=101, Expect=2e-23]} {RNA1509_17378} {RNA1310_19512.2} {RNA815_7968}
27. MligTC455_13840 13 0.27 Mlig455_003194

Neo: Germline

Age: Up-Down-Up

 1.815 - 0.960 - - - 0.855 Mlig455_003194 {REF} {Length: 1419} {RNA1509_4810} {RNA1310_55844} {RNA815_45047}
28. MligTC455_36080 29 0.61 Mlig455_045805, Mlig455_063180

Neo: -

Age: -

 1.814 0.863 0.951 - - - -

Mlig455_045805 {REF} {Length: 1469} {RNA1310_56480.2} {RNA815_34810}

Mlig455_063180 {REF} {Length: 365} {RNA1310_32344} {RNA815_34810}
29. MligTC455_13841 14 0.3 Mlig455_003292

Neo: Germline

Age: -

 1.809 - 0.962 - - - 0.847 Mlig455_003292 {REF} {Length: 1422} {RNA1509_4810} {RNA1310_55844} {RNA815_45047}
30. MligTC455_30797 66 1.37 Mlig455_027305

Neo: Germline

Age: -

Region-enriched R4: 5.284/0.00033

 1.807 - 0.952 - - - 0.855 Mlig455_027305 {REF} {Length: 1373} {RNA1310_25473.1} {RNA815_13904.1}
31. MligTC455_11976 18 0.37 Mlig455_030317

Neo: -

Age: -

Region-enriched R4: 3.345/0.02722

 1.805 - 0.964 - - - 0.841 Mlig455_030317 {REF} {Length: 1158} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=22.0]} {RNA1509_16469} {RNA1310_21639.1}
32. MligTC455_07147 7 0.15 Mlig455_013813

Neo: -

Age: -

 1.802 0.852 0.950 - - - - Mlig455_013813 {REF} {Length: 1376} {Pfam: Glycine rich protein [PF12810.9, score=41.1]} {RNA1310_68840} {RNA815_35307}
33. MligTC455_11470 27 0.57 Mlig455_029491, Mlig455_029511

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.087

 KIAA1958 1.8 - 0.972 - - - 0.828

Mlig455_029491 {REF} {Length: 3807} {RNA1509_9734} {RNA1310_54822} {RNA815_42052}

Mlig455_029511 {REF} {Length: 2220} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=67.7]; SH3 domain [PF17902.3, score=34.1]} {Human: ENSG00000165185, KIAA1958, KIAA1958, [RH, Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000045071, E130308A19Rik, RIKEN cDNA E130308A19 gene, [RH, Score=61.2, Expect=3e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=51.6, Expect=2e-06]} {RNA1509_6477} {RNA1310_54822} {RNA815_2208}
34. MligTC455_24154 248 5.18 Mlig455_040483, Mlig455_040489

Neo: Irradiation

Age: -

 1.786 0.815 0.971 - - - -

Mlig455_040483 {REF} {Length: 931} {Pfam: F5/8 type C domain [PF00754.27, score=23.2]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [Score=45.1, Expect=3e-06]} {RNA1509_25498} {RNA1310_35087} {RNA815_15678.1}

Mlig455_040489 {REF} {Length: 920} {Pfam: F5/8 type C domain [PF00754.27, score=23.4]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [Score=48.1, Expect=3e-07]} {RNA1509_25498} {RNA1310_33494} {RNA815_15678.1}
35. MligTC455_11329 16 0.33 Mlig455_030267

Neo: Germline

Age: Up-Down-Down

 1.784 0.831 0.953 - - - - Mlig455_030267 {REF} {Length: 3729} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.5]} {RNA1509_46545, RNA1509_7952} {RNA1310_7617, RNA1509_46545} {RNA1509_46545, RNA815_12945.1}
36. MligTC455_03918 6 0.13 Mlig455_038110

Neo: -

Age: -

 1.777 0.960 0.817 - - - - Mlig455_038110 {REF} {Length: 754} {NoTransDecoderORF} {RNA1310_72265}
37. MligTC455_10370 8 0.18 Mlig455_028583

Neo: -

Age: Up-Down-Down

 1.776 0.824 0.952 - - - - Mlig455_028583 {REF} {Length: 4752} {Pfam: Retrotransposon gag protein [PF03732.19, score=23.6]} {RNA1509_37310} {RNA1310_5066, RNA1509_37310} {RNA1509_37310, RNA815_49957}
38. MligTC455_05865 77 1.6 Mlig455_019309, Mlig455_019530, Mlig455_021054

Neo: -

Age: -

 1.76 0.796 0.964 - - - -

Mlig455_019309 {REF} {Length: 741} {RNA1509_45948} {RNA1310_18762.2} {RNA815_13811}

Mlig455_019530 {REF} {Length: 802} {RNA1509_45948} {RNA1310_18762.1} {RNA815_13811}

Mlig455_021054 {REF} {Length: 762} {RNA1509_45948} {RNA1310_18762.2, RNA1509_45948} {RNA1509_45948, RNA815_13811}
39. MligTC455_17938 988 20.59 Mlig455_012943, Mlig455_012954

Neo: -

Age: -

Region-specific R4: 5.211

 1.751 - 0.792 - - - 0.959

Mlig455_012943 {REF} {Length: 1242} {RNA1509_12916, RNA1509_25604} {RNA1310_21416.1, RNA1509_12916, RNA1509_25604} {RNA1509_12916, RNA1509_25604, RNA815_37948}

Mlig455_012954 {REF} {Length: 1376} {RNA1509_12916} {RNA1310_21416.1} {RNA815_37948}
40. MligTC455_22643 26 0.53 Mlig455_062373, Mlig455_062396

Neo: -

Age: -

 1.736 0.774 0.962 - - - -

Mlig455_062373 {REF} {Length: 502} {NoTransDecoderORF} {RNA1310_144428}

Mlig455_062396 {REF} {Length: 706} {NoTransDecoderORF} {RNA1509_51598} {RNA1310_144428} {RNA815_507.1}
41. MligTC455_50465 62 1.29 Mlig455_021079

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.867/0.00195

 1.732 0.959 0.773 - - - - Mlig455_021079 {REF} {Length: 1927} {RNA1509_25746} {RNA1310_23886.1} {RNA815_8813.1}
42. MligTC455_09188 89 1.85 Mlig455_011076

Neo: Germline

Age: Up-Down-Down

 1.731 0.950 - - - - 0.781 Mlig455_011076 {REF} {Length: 684} {RNA1509_52710} {RNA1310_30751} {RNA815_57718}
43. MligTC455_06919 49 1.02 Mlig455_000585

Neo: Germline

Age: -

Region-enriched R4: 3.601/0.02056

 1.72 0.954 0.766 - - - - Mlig455_000585 {REF} {Length: 1303} {RNA1509_54678} {RNA1310_47150} {RNA815_42356}
44. MligTC455_25966 16 0.33 Mlig455_031593

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=-1.293

 1.714 - 0.748 - - - 0.966 Mlig455_031593 {REF} {Length: 1613} {Pfam: THAP domain [PF05485.14, score=33.8]} {RNA1509_5734} {RNA1310_85582} {RNA815_22569.2}
45. MligTC455_08641 71 1.48 Mlig455_007098

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 5.553/0.00140

 1.704 - 0.955 - - - 0.749 Mlig455_007098 {REF} {Length: 1082} {Pfam: African swine fever virus J13L protein [PF05568.13, score=28.4]} {RNA1509_40372} {RNA1310_41126, RNA1509_40372} {RNA1509_40372, RNA815_24058}
46. MligTC455_22593 19 0.4 Mlig455_002116, Mlig455_033367

Neo: -

Age: -

 1.697 0.962 0.735 - - - -

Mlig455_002116 {REF} {Length: 1461} {NoTransDecoderORF} {RNA1509_19049} {RNA1310_55160} {RNA815_21371.1}

Mlig455_033367 {REF} {Length: 178} {NoTransDecoderORF} {RNA1509_19049} {RNA1310_24175.2} {RNA815_19926}
47. MligTC455_06920 64 1.33 Mlig455_030382

Neo: Germline

Age: -

Region-enriched R4: 3.121/0.01836

 1.687 0.725 0.962 - - - - Mlig455_030382 {REF} {Length: 1405} {RNA1509_54678} {RNA1310_47150, RNA1509_54678} {RNA1509_54678, RNA815_42356}
48. MligTC455_45667 17 0.36 Mlig455_053884

Neo: Germline

Age: -

 1.671 0.953 0.718 - - - - Mlig455_053884 {REF} {Length: 2853} {RNA1509_31795} {RNA1310_13390} {RNA815_9314.1}
49. MligTC455_12092 26 0.53 Mlig455_037145, Mlig455_038506

Neo: -

Age: -

Region-enriched R2: 8.236/0.00174

 1.66 - 0.702 - - - 0.958

Mlig455_037145 {REF} {Length: 1565} {RNA1310_83153} {RNA815_43915}

Mlig455_038506 {REF} {Length: 1558} {RNA1310_83153} {RNA815_43915}
50. MligTC455_09338 21 0.44 Mlig455_046795, Mlig455_063514, Mlig455_069947

Neo: -

Age: -

 TBX2 0.991 - - 0.991 - - -

Mlig455_046795 {REF} {Length: 2289} {Pfam: T-box [PF00907.24, score=197.1]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=177, Expect=2e-50]; ENSG00000089225, TBX5, T-box 5, [Score=174, Expect=3e-50]; ENSG00000149922, TBX6, T-box 6, [Score=174, Expect=5e-51]; ENSG00000121075, TBX4, T-box 4, [Score=173, Expect=6e-50]} {Mouse: ENSMUSG00000030699, Tbx6, T-box 6, [Score=177, Expect=2e-52]; ENSMUSG00000000093, Tbx2, T-box 2, [Score=177, Expect=1e-50]; ENSMUSG00000018263, Tbx5, T-box 5, [Score=174, Expect=2e-50]; ENSMUSG00000000094, Tbx4, T-box 4, [Score=174, Expect=3e-50]; ENSMUSG00000018604, Tbx3, T-box 3, [Score=172, Expect=1e-48]} {Dmel: FBgn0028789, Doc1, Dorsocross1, [Score=177, Expect=2e-53]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=175, Expect=3e-52]} {Smed: dd_Smed_v6_9460_0_2, dd_Smed_v6_9460_0_2, [Score=183, Expect=3e-53]} {RNA1310_144455}

Mlig455_063514 {REF} {Length: 1925} {Pfam: T-box [PF00907.24, score=56.5]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=78.6, Expect=2e-17]; ENSG00000149922, TBX6, T-box 6, [Score=76.3, Expect=6e-17]; ENSG00000121075, TBX4, T-box 4, [Score=74.7, Expect=5e-16]; ENSG00000089225, TBX5, T-box 5, [Score=74.7, Expect=3e-16]} {Mouse: ENSMUSG00000000093, Tbx2, T-box 2, [Score=79.0, Expect=1e-17]; ENSMUSG00000030699, Tbx6, T-box 6, [Score=77.0, Expect=5e-17]} {Dmel: FBgn0028789, Doc1, Dorsocross1, [Score=77.0, Expect=3e-17]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=72.0, Expect=1e-15]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=69.3, Expect=1e-14]} {RNA1310_144455}

Mlig455_069947 {REF} {Length: 2228} {Pfam: T-box [PF00907.24, score=197.1]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=177, Expect=2e-50]; ENSG00000089225, TBX5, T-box 5, [Score=174, Expect=3e-50]; ENSG00000149922, TBX6, T-box 6, [Score=174, Expect=5e-51]; ENSG00000121075, TBX4, T-box 4, [Score=173, Expect=6e-50]} {Mouse: ENSMUSG00000030699, Tbx6, T-box 6, [Score=177, Expect=2e-52]; ENSMUSG00000000093, Tbx2, T-box 2, [Score=177, Expect=1e-50]; ENSMUSG00000018263, Tbx5, T-box 5, [Score=174, Expect=2e-50]; ENSMUSG00000000094, Tbx4, T-box 4, [Score=174, Expect=3e-50]; ENSMUSG00000018604, Tbx3, T-box 3, [Score=172, Expect=1e-48]} {Dmel: FBgn0028789, Doc1, Dorsocross1, [Score=177, Expect=2e-53]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=175, Expect=3e-52]} {Smed: dd_Smed_v6_9460_0_2, dd_Smed_v6_9460_0_2, [Score=183, Expect=3e-53]} {RNA1310_144455}
51. MligTC455_42215 24 0.51 Mlig455_064640

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.712

Region-enriched R4: 5.138/0.03839

 TXNDC9 0.986 - - - - - 0.986 Mlig455_064640 {REF} {Length: 1405} {Pfam: Thioredoxin [PF00085.22, score=23.6]; Phosducin [PF02114.18, score=19.4]} {Human: ENSG00000115514, TXNDC9, thioredoxin domain containing 9, [Score=231, Expect=1e-75]} {Mouse: ENSMUSG00000058407, Txndc9, thioredoxin domain containing 9, [Score=230, Expect=1e-75]} {Dmel: FBgn0037843, CG4511, [Score=235, Expect=8e-78]} {Celegans: WBGene00006515, txdc-9, Thioredoxin domain-containing protein 9, [Score=180, Expect=2e-56]} {Smed: dd_Smed_v6_47084_0_1, dd_Smed_v6_47084_0_1, [Score=238, Expect=8e-80]} {RNA1509_32072, RNA1509_36998} {RNA1310_25162, RNA1509_32072, RNA1509_36998} {RNA1509_32072, RNA1509_36998, RNA815_123.2}
52. MligTC455_13595 38 0.78 Mlig455_058722, Mlig455_058723

Neo: Irradiation

Age: -

 0.98 - - - - - 0.980

Mlig455_058722 {REF} {Length: 13237} {Pfam: SnoaL-like domain [PF12680.9, score=37.3]} {RNA1509_13571} {RNA1310_37724.1, RNA1509_13571} {RNA1509_13571, RNA815_52132}

Mlig455_058723 {REF} {Length: 578} {RNA1509_13571} {RNA1310_37724.1} {RNA815_52132}
53. MligTC455_38024 23 0.47 Mlig455_040514, Mlig455_040515

Neo: -

Age: Up-Down-Down

 0.978 - - - - - 0.978

Mlig455_040514 {REF} {Length: 2007} {Pfam: Retrotransposon gag protein [PF03732.19, score=22.4]} {RNA1509_42928} {RNA1310_25911} {RNA815_25813.1}

Mlig455_040515 {REF} {Length: 6979} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.8]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=355, Expect=2e-106]} {RNA1509_57489} {RNA1310_27294, RNA1509_57489} {RNA1509_57489, RNA815_43011}
54. MligTC455_19909 8 0.17 Mlig455_038522

Neo: -

Age: -

 0.975 - 0.975 - - - - Mlig455_038522 {REF} {Length: 1397} {RNA1509_31739} {RNA1310_85224} {RNA815_11524}
55. MligTC455_04779 2 0.04 Mlig455_002022

Neo: -

Age: Down-Up-Down

 0.974 - 0.974 - - - - Mlig455_002022 {REF} {Length: 1496} {RNA1509_14149} {RNA1310_80598} {RNA815_41467.1}
56. MligTC455_02814 7 0.15 Mlig455_015991

Neo: Germline

Age: -

 0.972 - 0.972 - - - - Mlig455_015991 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_43596} {RNA1310_16896.1} {RNA815_47769}
57. MligTC455_11004 32 0.67 Mlig455_054795, Mlig455_054889

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.411

 0.971 0.971 - - - - -

Mlig455_054795 {REF} {Length: 1436} {RNA1509_22234, RNA1509_40720} {RNA1310_32042, RNA1509_22234} {RNA1509_22234, RNA815_14622}

Mlig455_054889 {REF} {Length: 1375} {RNA1509_22234} {RNA1310_32042} {RNA815_14622}
58. MligTC455_38304 6 0.12 Mlig455_056955

Neo: -

Age: Up-Down-Down

 0.971 - 0.971 - - - - Mlig455_056955 {REF} {Length: 2961} {RNA1509_42786} {RNA1310_18602.1} {RNA815_28181.1}
59. MligTC455_02396 10 0.21 Mlig455_029333

Neo: -

Age: -

 0.97 - 0.970 - - - - Mlig455_029333 {REF} {Length: 1014} {RNA1310_40082}
60. MligTC455_11890 21 0.45 Mlig455_000827

Neo: -

Age: -

 0.967 - 0.967 - - - - Mlig455_000827 {REF} {Length: 2241} {RNA1509_2911} {RNA1310_117291}
61. MligTC455_14900 44 0.91 Mlig455_003295, Mlig455_026800

Neo: -

Age: -

 0.962 - - - - - 0.962

Mlig455_003295 {REF} {Length: 227} {NoTransDecoderORF} {RNA1310_59138} {RNA815_10984}

Mlig455_026800 {REF} {Length: 1052} {NoTransDecoderORF} {RNA1310_15233} {RNA815_10984}
62. MligTC455_22749 19 0.4 Mlig455_034189

Neo: -

Age: -

 0.962 - 0.962 - - - - Mlig455_034189 {REF} {Length: 1647} {NoTransDecoderORF} {RNA1509_39040} {RNA1310_21199} {RNA815_4579}
63. MligTC455_48610 7 0.14 Mlig455_037453

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.515

 CAPN11 0.961 0.961 - - - - - Mlig455_037453 {REF} {Length: 2200} {Pfam: Calpain family cysteine protease [PF00648.23, score=64.8]} {Human: ENSG00000137225, CAPN11, calpain 11, [Score=67.0, Expect=6e-11]; ENSG00000182472, CAPN12, calpain 12, [Score=65.5, Expect=2e-10]; ENSG00000285078, AC256309.3, calpain 12, [Score=65.5, Expect=2e-10]; ENSG00000014216, CAPN1, calpain 1, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000054083, Capn12, calpain 12, [Score=64.7, Expect=2e-10]; ENSMUSG00000079110, Capn3, calpain 3, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=51.6, Expect=1e-06]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=63.5, Expect=2e-10]} {Smed: dd_Smed_v6_4499_0_1, dd_Smed_v6_4499_0_1, [Score=68.9, Expect=4e-12]} {RNA1509_27234} {RNA1310_12131} {RNA815_7478.1}
64. MligTC455_51119 47 0.99 Mlig455_021777, Mlig455_050835

Neo: -

Age: Up-Down-Down

 HVCN1 0.959 - 0.959 - - - -

Mlig455_021777 {REF} {Length: 1306} {Human: ENSG00000122986, HVCN1, hydrogen voltage gated channel 1, [Score=47.4, Expect=1e-05]} {Mouse: ENSMUSG00000064267, Hvcn1, hydrogen voltage-gated channel 1, [Score=48.9, Expect=3e-06]} {Smed: dd_Smed_v6_20053_0_1, dd_Smed_v6_20053_0_1, [Score=214, Expect=2e-65]} {RNA1310_72509} {RNA815_64339}

Mlig455_050835 {REF} {Length: 1720} {Pfam: Ion transport protein [PF00520.33, score=24.8]} {Human: ENSG00000122986, HVCN1, hydrogen voltage gated channel 1, [Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000064267, Hvcn1, hydrogen voltage-gated channel 1, [Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_20053_0_1, dd_Smed_v6_20053_0_1, [Score=308, Expect=7e-100]} {RNA1310_72509} {RNA815_64339}
65. MligTC455_22556 24 0.51 Mlig455_037182, Mlig455_052334

Neo: -

Age: -

 0.958 - - - - - 0.958

Mlig455_037182 {REF} {Length: 777} {RNA1509_56376} {RNA1310_75584} {RNA815_39164}

Mlig455_052334 {REF} {Length: 777} {RNA1509_56376} {RNA1310_75584} {RNA815_39164}
66. MligTC455_03061 6 0.13 Mlig455_059447

Neo: -

Age: -

 0.957 - 0.957 - - - - Mlig455_059447 {REF} {Length: 425} {NoTransDecoderORF} {RNA1509_28484} {RNA1310_76113} {RNA815_10912}
67. MligTC455_23708 4 0.09 Mlig455_006641

Neo: -

Age: -

 0.956 - 0.956 - - - - Mlig455_006641 {REF} {Length: 1179} {Pfam: Integrase core domain [PF00665.28, score=22.0]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=55.8, Expect=6e-09]}
68. MligTC455_46335 4 0.09 Mlig455_065243

Neo: -

Age: Up-Down-Down

 FAM13A 0.955 - 0.955 - - - - Mlig455_065243 {REF} {Length: 3502} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=137.5]} {Human: ENSG00000138640, FAM13A, family with sequence similarity 13 member A, [RH, Score=135, Expect=1e-31]} {Mouse: ENSMUSG00000037709, Fam13a, family with sequence similarity 13, member A, [RH, Score=125, Expect=6e-29]} {Dmel: FBgn0028494, CG6424, [RH, Score=92.8, Expect=8e-19]} {Celegans: WBGene00008006, tag-325, WW domain-containing protein tag-325, [Score=91.3, Expect=1e-19]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [RH, Score=180, Expect=2e-46]} {RNA1509_4340} {RNA1310_2121} {RNA815_16484}
69. MligTC455_28806 10 0.22 Mlig455_023057

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_023057 {REF} {Length: 1695} {RNA1509_58464} {RNA1310_48452} {RNA815_2198.1}
70. MligTC455_00915 4 0.09 Mlig455_032896

Neo: -

Age: -

 0.952 - 0.952 - - - - Mlig455_032896 {REF} {Length: 525} {NoTransDecoderORF} {RNA1509_36146} {RNA1310_101784} {RNA815_48411}
71. MligTC455_03853 6 0.12 Mlig455_010870

Neo: -

Age: Up-Down-Down

 0.952 - 0.952 - - - - Mlig455_010870 {REF} {Length: 539} {NoTransDecoderORF} {RNA1310_50585.1} {RNA815_37596}
72. MligTC455_44240 79 1.64 Mlig455_020298

Neo: Germline

Age: -

Region-enriched R4: 5.614/0.00301

 0.951 - 0.951 - - - - Mlig455_020298 {REF} {Length: 573} {RNA1310_102996}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA