M. lignano Tomo-Seq
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Results for MligTC455_00642

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_00642 11 0.24 Mlig455_045287

Neo: -

Age: -

 Mlig455_045287 {REF} {Length: 714}

Cumulative graph for MligTC455_00642

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.339 0.601 1.00000 1.00000
RegionR2 0.252 0.601 0.99994 1.00000
RegionR3 -0.602 0.601 1.00000 1.00000
RegionR4 0.623 0.601 0.99990 1.00000
RegionR5 -0.739 0.601 0.99993 1.00000
RegionR6 -0.584 0.601 1.00000 1.00000
RegionR7 -0.549 0.601 0.99998 1.00000
RegionR8 -0.739 0.601 0.99997 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.479 0.601 0.99995 1.00000
RegenerationR2 4.179 0.601 0.99956 1.00000
RegenerationR3 4.229 0.601 0.99964 1.00000
RegenerationR4 1.16 0.601 0.99985 1.00000
RegenerationR5 3.406 0.601 0.99981 1.00000
RegenerationR6 2.02 0.601 0.99990 1.00000
RegenerationBL 2.581 0.601 0.99994 1.00000
RegenerationTP 3.819 0.601 0.99972 1.00000


Genes with expression patterns similar to MligTC455_00642

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_00642 11 0.24 Mlig455_045287

Neo: -

Age: -

 1 - - - - - 1.000 Mlig455_045287 {REF} {Length: 714}
2. MligTC455_41625 27 0.55 Mlig455_004793

Neo: -

Age: -

Regeneration-upregulated R2: 7.202

Regeneration-enriched R2: 7.202

 0.996 - - - - - 0.996 Mlig455_004793 {REF} {Length: 975} {NoTransDecoderORF} {RNA1310_83747} {RNA815_39967}
3. MligTC455_29263 141 2.94 Mlig455_011098, Mlig455_058075

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.055

 0.976 - - - - - 0.976

Mlig455_011098 {REF} {Length: 8375} {RNA1509_9188} {RNA1310_63.1} {RNA815_23.1}

Mlig455_058075 {REF} {Length: 10281} {RNA1509_39758, RNA1509_41143, RNA1509_9188} {RNA1310_234.1, RNA1509_39758, RNA1509_41143, RNA1509_9188} {RNA1509_39758, RNA1509_41143, RNA1509_9188, RNA815_23.1}
4. MligTC455_10163 56 1.17 Mlig455_047947

Neo: -

Age: -

Regeneration-upregulated R2: 6.060

Regeneration-enriched R2: 6.060

 PRR9 0.972 - - - - - 0.972 Mlig455_047947 {REF} {Length: 1695} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.8, Expect=5e-07]} {RNA1509_42160} {RNA1310_38543} {RNA815_47602}
5. MligTC455_40308 21 0.44 Mlig455_047748

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_047748 {REF} {Length: 474} {NoTransDecoderORF}
6. MligTC455_10164 25 0.53 Mlig455_047948

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_047948 {REF} {Length: 437} {NoTransDecoderORF} {RNA1509_42160} {RNA1310_38543} {RNA815_64948}
7. MligTC455_22450 40 0.83 Mlig455_024092, Mlig455_033065

Neo: -

Age: -

 ASIC2, ASIC3 0.962 - - - - - 0.962

Mlig455_024092 {REF} {Length: 1894} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=190.8]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=58.5, Expect=2e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=56.2, Expect=8e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=107, Expect=4e-24]} {RNA1310_43687}

Mlig455_033065 {REF} {Length: 2669} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.0]} {Human: ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=60.8, Expect=5e-09]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=56.2, Expect=8e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=108, Expect=1e-24]} {RNA1310_43687}
8. MligTC455_29061 287 5.98 Mlig455_061344

Neo: -

Age: Up-Up-Down

 0.962 - - - - - 0.962 Mlig455_061344 {REF} {Length: 4569} {RNA1509_40044} {RNA1310_6084, RNA1509_40044} {RNA1509_40044, RNA815_5170.1}
9. MligTC455_34154 38 0.8 Mlig455_057757

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_057757 {REF} {Length: 453} {NoTransDecoderORF} {RNA1310_95072}
10. MligTC455_04110 13 0.27 Mlig455_065812

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_065812 {REF} {Length: 2664} {RNA1310_86305}
11. MligTC455_19537 88 1.84 Mlig455_003807, Mlig455_033281

Neo: -

Age: -

 0.957 - - - - - 0.957

Mlig455_003807 {REF} {Length: 2979} {RNA1509_47157} {RNA1310_48795} {RNA815_29674}

Mlig455_033281 {REF} {Length: 441} {NoTransDecoderORF} {RNA1310_57478} {RNA815_29674}
12. MligTC455_10486 26 0.54 Mlig455_054215

Neo: -

Age: -

Regeneration-enriched R3: 7.836
Regeneration-enriched R2: 6.747
Regeneration-enriched R5: 6.516

 0.956 - - - - - 0.956 Mlig455_054215 {REF} {Length: 905} {NoTransDecoderORF} {RNA1509_46406} {RNA1310_124427} {RNA815_61152.2}
13. MligTC455_51168 13 0.26 Mlig455_064570

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_064570 {REF} {Length: 248} {RNA1509_27263}
14. MligTC455_56116 21 0.43 Mlig455_008372

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_008372 {REF} {Length: 361} {NoTransDecoderORF}
15. MligTC455_30814 51 1.07 Mlig455_003105, Mlig455_003106

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_003105 {REF} {Length: 1284} {TRANSSPLICED} {RNA1509_58333} {RNA1310_55385.1} {RNA815_38567}

Mlig455_003106 {REF} {Length: 2903} {RNA1509_25856} {RNA1310_27220} {RNA815_18032}
16. MligTC455_52492 66 1.38 Mlig455_041983

Neo: -

Age: -

Region-enriched R2: 4.434/0.03756

 0.951 - - - - - 0.951 Mlig455_041983 {REF} {Length: 1100} {RNA1509_31700, RNA1509_40092} {RNA1310_225.1, RNA1509_40092} {RNA1509_40092, RNA815_107.1}

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