TomoSeq data search

Data search

Results for MligTC455_01049

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_01049

398

8.29

Mlig455_012177

Neo: -

Age: -

Region-enriched R4: 2.311/0.03927

Mlig455_012177 {REF} {Length: 1963} {RNA1509_34176} {RNA1310_7625.1, RNA1509_34176} {RNA1509_34176, RNA815_9375.1}

Cumulative graph for MligTC455_01049

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.163	3.484	0.93154	1.00000
RegionR2	-1.649	3.484	0.05273	0.27486
RegionR3	0.002	3.484	0.99929	1.00000
RegionR4	2.311	3.484	0.00552	0.03927
RegionR5	1.572	3.484	0.01252	0.06813
RegionR6	0.339	3.484	0.61412	1.00000
RegionR7	-0.779	3.484	0.38611	1.00000
RegionR8	-1.96	3.484	0.11562	0.62828

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.865	3.484	0.72147	1.00000
RegenerationR2	-0.473	3.484	0.53937	0.88794
RegenerationR3	0.148	3.484	0.86101	1.00000
RegenerationR4	0.211	3.484	0.79979	0.98639
RegenerationR5	-0.478	3.484	0.51531	0.86702
RegenerationR6	-0.135	3.484	0.85781	1.00000
RegenerationBL	-0.116	3.484	0.90430	1.00000
RegenerationTP	-0.152	3.484	0.89165	1.00000

Genes with expression patterns similar to MligTC455_01049

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_01049	398	8.29	Mlig455_012177	Neo: - Age: - Region-enriched R4: 2.311/0.03927		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012177 {REF} {Length: 1963} {RNA1509_34176} {RNA1310_7625.1, RNA1509_34176} {RNA1509_34176, RNA815_9375.1}
2.	MligTC455_43798	3196	66.58	Mlig455_004916	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=-0.244	LSM7	1.699	-	-	-	-	0.953	0.746	Mlig455_004916 {REF} {Length: 760} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=63.0]} {Human: ENSG00000130332, LSM7, LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=145, Expect=7e-46]} {Mouse: ENSMUSG00000035215, Lsm7, LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=145, Expect=3e-46]} {Dmel: FBgn0261068, LSm7, Like Sm 7, [RH, Score=140, Expect=4e-44]} {Celegans: WBGene00003081, lsm-7, LSM Sm-like protein, [RH, Score=122, Expect=2e-37]} {Smed: dd_Smed_v6_3610_0_1, dd_Smed_v6_3610_0_1, [RH, Score=142, Expect=5e-45]} {RNA1509_19701, RNA1509_5632} {RNA1310_2555.1, RNA1509_19701} {RNA1509_19701, RNA815_17978}
3.	MligTC455_52970	1058	22.04	Mlig455_049277	Neo: - Age: - Region-enriched R4: 2.021/0.00161 Region-enriched R3: 1.402/0.03512 Region-enriched R5: 1.142/0.04481		0.974	-	-	-	-	-	0.974	Mlig455_049277 {REF} {Length: 1434} {RNA1509_18850, RNA1509_26877} {RNA1310_29014, RNA1509_26877} {RNA1509_26877, RNA815_8071.2}
4.	MligTC455_12470	343	7.15	Mlig455_015046	Neo: - Age: Up-Down-Up Region-enriched R4: 2.340/0.01759 Region-enriched R3: 2.177/0.01673	RAB35	0.973	-	-	-	-	-	0.973	Mlig455_015046 {REF} {Length: 937} {Pfam: Ras family [PF00071.24, score=126.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.6]; ADP-ribosylation factor family [PF00025.23, score=39.6]; RsgA GTPase [PF03193.18, score=34.0]; 50S ribosome-binding GTPase [PF01926.25, score=26.5]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.0]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=114, Expect=8e-31]; ENSG00000172794, RAB37, RAB37, member RAS oncogene family, [Score=110, Expect=6e-30]; ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=109, Expect=3e-29]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [Score=114, Expect=5e-31]; ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=110, Expect=1e-29]} {Dmel: FBgn0031090, Rab35, [Score=111, Expect=2e-30]} {Celegans: WBGene00004277, rab-18, Ras-related protein Rab-18, [Score=116, Expect=3e-32]} {Smed: dd_Smed_v6_2603_0_1, dd_Smed_v6_2603_0_1, [Score=125, Expect=1e-35]} {RNA1509_25152} {RNA1310_42493} {RNA815_19710}
5.	MligTC455_11353	696	14.51	Mlig455_004383, Mlig455_037197	Neo: Germline Age: Up-Down-Down Region-specific R4: 4.069		0.958	-	-	-	-	-	0.958	Mlig455_004383 {REF} {Length: 3587} {RNA1509_23567} {RNA1310_21215} {RNA815_19894} Mlig455_037197 {REF} {Length: 4232} {RNA1509_23567} {RNA1310_21215, RNA1509_23567} {RNA1509_23567, RNA815_19894}
6.	MligTC455_32716	4106	85.53	Mlig455_020647, Mlig455_051282	Neo: Int S/G2/M Age: logFC(26M/2M)=0.234		0.958	-	-	-	-	-	0.958	Mlig455_020647 {REF} {Length: 540} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_8757} {RNA1310_52206.2, RNA1509_8757} {RNA1509_8757, RNA815_26551.1} Mlig455_051282 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_52253.1} {RNA815_2268.1}
7.	MligTC455_16016	402	8.37	Mlig455_052745, Mlig455_052746	Neo: - Age: -	PM20D2	0.951	-	-	-	-	-	0.951	Mlig455_052745 {REF} {Length: 2023} {TRANSSPLICED} {Pfam: Peptidase dimerisation domain [PF07687.16, score=31.9]; Peptidase family M20/M25/M40 [PF01546.30, score=29.5]} {Human: ENSG00000146281, PM20D2, peptidase M20 domain containing 2, [RH, Score=347, Expect=2e-116]} {Mouse: ENSMUSG00000054659, Pm20d2, peptidase M20 domain containing 2, [RH, Score=346, Expect=4e-116]} {Smed: dd_Smed_v6_10744_0_1, dd_Smed_v6_10744_0_1, [RH, Score=351, Expect=5e-119]} {RNA1509_49316} {RNA1310_17727.1, RNA1509_49316} {RNA1509_49316, RNA815_17549} Mlig455_052746 {REF} {Length: 2115} {Pfam: Peptidase dimerisation domain [PF07687.16, score=31.5]; Peptidase family M20/M25/M40 [PF01546.30, score=31.2]} {Human: ENSG00000146281, PM20D2, peptidase M20 domain containing 2, [RH, Score=350, Expect=1e-117]} {Mouse: ENSMUSG00000054659, Pm20d2, peptidase M20 domain containing 2, [RH, Score=347, Expect=6e-117]} {Smed: dd_Smed_v6_10744_0_1, dd_Smed_v6_10744_0_1, [RH, Score=351, Expect=3e-119]} {RNA1509_49316} {RNA1310_17727.1} {RNA815_17549}

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