Data search
Results for MligTC455_01389
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_01389 | 22 | 0.46 | Mlig455_000908, Mlig455_030007 | Neo: - Age: - |
RTL1 | Mlig455_000908 {REF} {Length: 200} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.0]; Aspartyl protease [PF13650.8, score=23.2]; Retroviral aspartyl protease [PF00077.22, score=19.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=191, Expect=5e-51]} {RNA1509_56042} {RNA1310_5779} {RNA815_31042} Mlig455_030007 {REF} {Length: 3411} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.0]; Aspartyl protease [PF13650.8, score=23.2]; Retroviral aspartyl protease [PF00077.22, score=19.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=191, Expect=5e-51]} {RNA1509_56042} {RNA1310_5779} {RNA815_31042} |
Cumulative graph for MligTC455_01389
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.798 | 1.041 | 0.76914 | 1.00000 | |
| RegionR2 | 0.19 | 1.041 | 0.83162 | 1.00000 | |
| RegionR3 | -0.605 | 1.041 | 0.97913 | 1.00000 | |
| RegionR4 | 2.027 | 1.041 | 0.19077 | 0.46597 | |
| RegionR5 | 1.11 | 1.041 | 0.42604 | 0.78586 | |
| RegionR6 | -0.587 | 1.041 | 0.97637 | 1.00000 | |
| RegionR7 | -0.025 | 1.041 | 0.90848 | 1.00000 | |
| RegionR8 | -0.313 | 1.041 | 0.97313 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.793 | 1.041 | 0.99997 | 1.00000 | |
| RegenerationR2 | 1.045 | 1.041 | 0.39276 | 0.80968 | |
| RegenerationR3 | -1.218 | 1.041 | 0.39052 | 0.79638 | |
| RegenerationR4 | -2.401 | 1.041 | 0.03582 | 0.30601 | |
| RegenerationR5 | -0.902 | 1.041 | 0.32151 | 0.74503 | |
| RegenerationR6 | -1.195 | 1.041 | 0.44855 | 0.76937 | |
| RegenerationBL | -2.771 | 1.041 | 0.39946 | 0.76809 | |
| RegenerationTP | 0.663 | 1.041 | 0.79597 | 1.00000 |
Genes with expression patterns similar to MligTC455_01389
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_01389 | 22 | 0.46 | Mlig455_000908, Mlig455_030007 | Neo: - Age: - |
RTL1 | 3 | 1.000 | 1.000 | - | - | 1.000 | - | Mlig455_000908 {REF} {Length: 200} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.0]; Aspartyl protease [PF13650.8, score=23.2]; Retroviral aspartyl protease [PF00077.22, score=19.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=191, Expect=5e-51]} {RNA1509_56042} {RNA1310_5779} {RNA815_31042} Mlig455_030007 {REF} {Length: 3411} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.0]; Aspartyl protease [PF13650.8, score=23.2]; Retroviral aspartyl protease [PF00077.22, score=19.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=191, Expect=5e-51]} {RNA1509_56042} {RNA1310_5779} {RNA815_31042} |