TomoSeq data search

Data search

Results for MligTC455_01409

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_01409	50	1.04	Mlig455_044128	Neo: - Age: -		Mlig455_044128 {REF} {Length: 114} {NoTransDecoderORF} {RNA1509_58257} {RNA1310_9387.2} {RNA815_4111.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_01409

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.227	1.509	0.99967	1.00000
RegionR2	1.779	1.509	0.24023	0.61496
RegionR3	2.779	1.509	0.03087	0.30260
RegionR4	-0.351	1.509	0.90135	1.00000
RegionR5	0.077	1.509	0.82173	1.00000
RegionR6	1.222	1.509	0.43213	0.99535
RegionR7	1.251	1.509	0.42380	1.00000
RegionR8	-1.53	1.509	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.054	1.509	0.99995	1.00000
RegenerationR2	-4.342	1.509	0.00262	0.07736
RegenerationR3	-3.126	1.509	0.00218	0.08031
RegenerationR4	-2.491	1.509	0.01476	0.19033
RegenerationR5	-2.702	1.509	0.00636	0.14528
RegenerationR6	-2.147	1.509	0.03666	0.23907
RegenerationBL	-1.548	1.509	0.98548	1.00000
RegenerationTP	-1.788	1.509	0.97076	1.00000

Genes with expression patterns similar to MligTC455_01409

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_01409	50	1.04	Mlig455_044128	Neo: - Age: -		4	1.000	1.000	1.000	-	1.000	-	Mlig455_044128 {REF} {Length: 114} {NoTransDecoderORF} {RNA1509_58257} {RNA1310_9387.2} {RNA815_4111.1}
2.	MligTC455_14741	176	3.67	Mlig455_011002	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.244	SMS	1.733	0.775	-	-	-	0.958	-	Mlig455_011002 {REF} {Length: 1797} {Pfam: Spermine/spermidine synthase domain [PF01564.19, score=88.5]; Spermidine synthase tetramerisation domain [PF17284.4, score=27.5]} {Human: ENSG00000102172, SMS, spermine synthase, [RH, Score=159, Expect=6e-45]} {Mouse: ENSMUSG00000071708, Sms, spermine synthase, [RH, Score=159, Expect=4e-45]} {Dmel: FBgn0036272, CG4300, [RH, Score=168, Expect=1e-47]} {Smed: dd_Smed_v6_9035_0_1, dd_Smed_v6_9035_0_1, [Score=72.4, Expect=3e-14]} {RNA1509_38495} {RNA1310_22551} {RNA815_6564.2}
3.	MligTC455_33006	2208	45.99	Mlig455_063158	Neo: - Age: Down-Up-Up Region-enriched R4: 2.219/0.00001 Region-enriched R3: 1.514/0.00240		1.687	-	0.737	-	-	0.950	-	Mlig455_063158 {REF} {Length: 2059} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=27.0]} {RNA1509_4524} {RNA1310_31808} {RNA815_13487}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_01409

1.04

Mlig455_044128

Neo: -

Age: -

1.000

Mlig455_044128 {REF} {Length: 114} {NoTransDecoderORF} {RNA1509_58257} {RNA1310_9387.2} {RNA815_4111.1}

MligTC455_14741

176

3.67

Mlig455_011002

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.244

SMS

1.733

0.775

0.958

Mlig455_011002 {REF} {Length: 1797} {Pfam: Spermine/spermidine synthase domain [PF01564.19, score=88.5]; Spermidine synthase tetramerisation domain [PF17284.4, score=27.5]} {Human: ENSG00000102172, SMS, spermine synthase, [RH, Score=159, Expect=6e-45]} {Mouse: ENSMUSG00000071708, Sms, spermine synthase, [RH, Score=159, Expect=4e-45]} {Dmel: FBgn0036272, CG4300, [RH, Score=168, Expect=1e-47]} {Smed: dd_Smed_v6_9035_0_1, dd_Smed_v6_9035_0_1, [Score=72.4, Expect=3e-14]} {RNA1509_38495} {RNA1310_22551} {RNA815_6564.2}

MligTC455_33006

2208

45.99

Mlig455_063158

Neo: -

Age: Down-Up-Up

Region-enriched R4: 2.219/0.00001
Region-enriched R3: 1.514/0.00240

1.687

0.737

0.950

Mlig455_063158 {REF} {Length: 2059} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=27.0]} {RNA1509_4524} {RNA1310_31808} {RNA815_13487}