TomoSeq data search

Data search

Results for MligTC455_01419

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_01419

37

0.77

Mlig455_046781, Mlig455_046806

Neo: -

Age: -

Mlig455_046781 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_105383} {RNA815_35770}

Mlig455_046806 {REF} {Length: 319} {NoTransDecoderORF} {RNA1310_105383} {RNA815_35770}

Cumulative graph for MligTC455_01419

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.536	1.115	1.00000	1.00000
RegionR2	2.145	1.115	0.58525	0.94021
RegionR3	-0.13	1.115	0.73352	1.00000
RegionR4	1.854	1.115	0.20381	0.48489
RegionR5	0.539	1.115	0.48829	0.85165
RegionR6	-2.998	1.115	1.00000	1.00000
RegionR7	1.612	1.115	0.66339	1.00000
RegionR8	1.512	1.115	0.80827	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.706	1.115	1.00000	1.00000
RegenerationR2	-1.601	1.115	0.40677	0.81818
RegenerationR3	1.431	1.115	0.74273	0.96174
RegenerationR4	-0.389	1.115	0.71868	0.96095
RegenerationR5	1.53	1.115	0.70350	0.95272
RegenerationR6	1.666	1.115	1.00000	1.00000
RegenerationBL	-1.538	1.115	0.99995	1.00000
RegenerationTP	-3.064	1.115	0.40518	0.83299

Genes with expression patterns similar to MligTC455_01419

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_01419	37	0.77	Mlig455_046781, Mlig455_046806	Neo: - Age: -		2	1.000	-	-	-	-	1.000	Mlig455_046781 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_105383} {RNA815_35770} Mlig455_046806 {REF} {Length: 319} {NoTransDecoderORF} {RNA1310_105383} {RNA815_35770}
2.	MligTC455_28453	348	7.25	Mlig455_061725, Mlig455_061755	Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.333 Region-specific R4: 4.354	ABCA1	0.979	-	-	-	-	-	0.979	Mlig455_061725 {REF} {Length: 7872} {Pfam: ABC-2 family transporter protein [PF12698.9, score=183.3]; ABC transporter [PF00005.29, score=176.5]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=71.3]; AAA domain [PF13476.8, score=23.3]; AAA ATPase domain [PF13175.8, score=20.7]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [RH, Score=1228, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [RH, Score=1229, Expect=0.0]; ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [RH, Score=1168, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=443, Expect=2e-127]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [RH, Score=415, Expect=1e-117]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [RH, Score=1170, Expect=0.0]} {RNA1509_54611} {RNA1310_2227} {RNA815_1429} Mlig455_061755 {REF} {Length: 8216} {Pfam: ABC transporter [PF00005.29, score=175.3]; ABC-2 family transporter protein [PF12698.9, score=169.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=71.1]; AAA domain [PF13476.8, score=23.1]; AAA ATPase domain [PF13175.8, score=20.0]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [RH, Score=1226, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [RH, Score=1226, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=447, Expect=2e-128]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [RH, Score=414, Expect=3e-117]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [RH, Score=1167, Expect=0.0]} {RNA1509_9108} {RNA1310_2227} {RNA815_1429}
3.	MligTC455_40238	421	8.78	Mlig455_060872	Neo: Germline Age: Up-Down-Down Region-specific R4: 3.312 Region-enriched R4: 2.313/0.00220 Region-enriched R5: 1.641/0.03972	ITFG1	0.971	-	-	-	-	-	0.971	Mlig455_060872 {REF} {Length: 2736} {TRANSSPLICED} {Pfam: FG-GAP-like repeat [PF13517.8, score=58.6]; FG-GAP repeat [PF01839.25, score=26.6]} {Human: ENSG00000129636, ITFG1, integrin alpha FG-GAP repeat containing 1, [Score=102, Expect=5e-22]} {Mouse: ENSMUSG00000031703, Itfg1, integrin alpha FG-GAP repeat containing 1, [Score=99.8, Expect=2e-21]} {Dmel: FBgn0036509, CG7739, [Score=67.4, Expect=3e-11]} {Celegans: WBGene00014023, lnkn-1, [Score=89.0, Expect=3e-18]} {Smed: dd_Smed_v6_3036_0_1, dd_Smed_v6_3036_0_1, [Score=87.4, Expect=8e-18]} {RNA1509_20761, RNA1509_43054} {RNA1310_6703.1, RNA1509_20761, RNA1509_43054} {RNA1509_20761, RNA1509_43054, RNA815_2149}
4.	MligTC455_49887	95	1.97	Mlig455_011963	Neo: - Age: -	ATP2B3	0.963	-	-	-	-	-	0.963	Mlig455_011963 {REF} {Length: 5673} {Pfam: Cation transporting ATPase, C-terminus [PF00689.23, score=146.5]; E1-E2 ATPase [PF00122.22, score=103.7]; Cation transport ATPase (P-type) [PF13246.8, score=66.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=55.9]; Cation transporter/ATPase, N-terminus [PF00690.28, score=52.4]; Plasma membrane calcium transporter ATPase C terminal [PF12424.10, score=44.8]; haloacid dehalogenase-like hydrolase [PF08282.14, score=27.6]} {Human: ENSG00000067842, ATP2B3, ATPase plasma membrane Ca2+ transporting 3, [RH, Score=1259, Expect=0.0]; ENSG00000157087, ATP2B2, ATPase plasma membrane Ca2+ transporting 2, [RH, Score=1250, Expect=0.0]; ENSG00000070961, ATP2B1, ATPase plasma membrane Ca2+ transporting 1, [RH, Score=1204, Expect=0.0]} {Mouse: ENSMUSG00000031376, Atp2b3, ATPase, Ca++ transporting, plasma membrane 3, [RH, Score=1256, Expect=0.0]; ENSMUSG00000030302, Atp2b2, ATPase, Ca++ transporting, plasma membrane 2, [RH, Score=1248, Expect=0.0]; ENSMUSG00000019943, Atp2b1, ATPase, Ca++ transporting, plasma membrane 1, [RH, Score=1217, Expect=0.0]} {Dmel: FBgn0259214, PMCA, plasma membrane calcium ATPase, [RH, Score=1264, Expect=0.0]} {Celegans: WBGene00003153, mca-3, Calcium-transporting ATPase, [RH, Score=1229, Expect=0.0]} {Smed: dd_Smed_v6_4145_0_1, dd_Smed_v6_4145_0_1, [RH, Score=1320, Expect=0.0]} {RNA1509_40447} {RNA1310_2050.1} {RNA815_10457}

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