TomoSeq data search

Data search

Results for MligTC455_02076

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_02076	8	0.16	Mlig455_011856	Neo: - Age: -		Mlig455_011856 {REF} {Length: 136} {NoTransDecoderORF} {RNA1509_60137} {RNA1310_67986} {RNA815_40982}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_02076

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_02076

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_02076	8	0.16	Mlig455_011856	Neo: - Age: -		1	-	1.000	-	-	-	-	Mlig455_011856 {REF} {Length: 136} {NoTransDecoderORF} {RNA1509_60137} {RNA1310_67986} {RNA815_40982}
2.	MligTC455_28992	248	5.17	Mlig455_007574	Neo: - Age: - Region-enriched R3: 5.359/0.00013	SIX1	0.962	-	0.962	-	-	-	-	Mlig455_007574 {REF} {Length: 2756} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=146.3]; Homeodomain [PF00046.31, score=56.2]; Homeobox KN domain [PF05920.13, score=49.9]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [Score=313, Expect=9e-104]; ENSG00000170577, SIX2, SIX homeobox 2, [Score=307, Expect=3e-101]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=313, Expect=5e-104]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=308, Expect=1e-101]} {Dmel: FBgn0003460, so, sine oculis, [Score=303, Expect=3e-98]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=246, Expect=2e-78]} {Smed: dd_Smed_v6_15436_0_1, dd_Smed_v6_15436_0_1, [RH, Score=326, Expect=2e-106]} {RNA1509_55511} {RNA1310_27700, RNA1509_55511} {RNA1509_55511, RNA815_16067}
3.	MligTC455_14576	9	0.19	Mlig455_030513	Neo: - Age: -	KCNH4	0.957	-	0.957	-	-	-	-	Mlig455_030513 {REF} {Length: 3573} {Pfam: Ion transport protein [PF00520.33, score=103.8]; PAS domain [PF13426.9, score=64.8]; Ion channel [PF07885.18, score=44.1]; Cyclic nucleotide-binding domain [PF00027.31, score=34.1]; PAS fold [PF08448.12, score=19.3]; PAS fold [PF00989.27, score=19.1]} {Human: ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=683, Expect=0.0]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=433, Expect=7e-137]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=806, Expect=0.0]} {RNA1509_55158} {RNA1310_6929.2} {RNA815_22299}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_02076

0.16

Mlig455_011856

Neo: -

Age: -

1.000

Mlig455_011856 {REF} {Length: 136} {NoTransDecoderORF} {RNA1509_60137} {RNA1310_67986} {RNA815_40982}

MligTC455_28992

248

5.17

Mlig455_007574

Neo: -

Age: -

Region-enriched R3: 5.359/0.00013

SIX1

0.962

Mlig455_007574 {REF} {Length: 2756} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=146.3]; Homeodomain [PF00046.31, score=56.2]; Homeobox KN domain [PF05920.13, score=49.9]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [Score=313, Expect=9e-104]; ENSG00000170577, SIX2, SIX homeobox 2, [Score=307, Expect=3e-101]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=313, Expect=5e-104]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=308, Expect=1e-101]} {Dmel: FBgn0003460, so, sine oculis, [Score=303, Expect=3e-98]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=246, Expect=2e-78]} {Smed: dd_Smed_v6_15436_0_1, dd_Smed_v6_15436_0_1, [RH, Score=326, Expect=2e-106]} {RNA1509_55511} {RNA1310_27700, RNA1509_55511} {RNA1509_55511, RNA815_16067}

MligTC455_14576

0.19

Mlig455_030513

Neo: -

Age: -

KCNH4

0.957

Mlig455_030513 {REF} {Length: 3573} {Pfam: Ion transport protein [PF00520.33, score=103.8]; PAS domain [PF13426.9, score=64.8]; Ion channel [PF07885.18, score=44.1]; Cyclic nucleotide-binding domain [PF00027.31, score=34.1]; PAS fold [PF08448.12, score=19.3]; PAS fold [PF00989.27, score=19.1]} {Human: ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=683, Expect=0.0]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=433, Expect=7e-137]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=806, Expect=0.0]} {RNA1509_55158} {RNA1310_6929.2} {RNA815_22299}