Data search
Results for MligTC455_02309
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_02309 | 8 | 0.16 | Mlig455_044773 | Neo: - Age: - |
Mlig455_044773 {REF} {Length: 1088} {Pfam: RNase H [PF00075.26, score=22.6]} {RNA1310_24973} {RNA815_7432} |
Cumulative graph for MligTC455_02309
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.214 | 0.66 | 0.99976 | 1.00000 | |
| RegionR2 | 2.413 | 0.66 | 0.99988 | 1.00000 | |
| RegionR3 | -0.179 | 0.66 | 0.99984 | 1.00000 | |
| RegionR4 | -2.187 | 0.66 | 0.99977 | 1.00000 | |
| RegionR5 | -1.103 | 0.66 | 0.99981 | 1.00000 | |
| RegionR6 | -0.049 | 0.66 | 0.99983 | 1.00000 | |
| RegionR7 | 1.077 | 0.66 | 0.99996 | 1.00000 | |
| RegionR8 | 1.241 | 0.66 | 0.99992 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.763 | 0.66 | 0.99991 | 1.00000 | |
| RegenerationR2 | 1.205 | 0.66 | 0.15771 | 0.59456 | |
| RegenerationR3 | 5.347 | 0.66 | 0.01479 | 0.22220 | |
| RegenerationR4 | 4.739 | 0.66 | 0.03223 | 0.29031 | |
| RegenerationR5 | 4.766 | 0.66 | 0.00669 | 0.14907 | |
| RegenerationR6 | 1.518 | 0.66 | 0.99987 | 1.00000 | |
| RegenerationBL | 0.839 | 0.66 | 0.99990 | 1.00000 | |
| RegenerationTP | 0.726 | 0.66 | 0.99990 | 1.00000 |
Genes with expression patterns similar to MligTC455_02309
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_02309 | 8 | 0.16 | Mlig455_044773 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_044773 {REF} {Length: 1088} {Pfam: RNase H [PF00075.26, score=22.6]} {RNA1310_24973} {RNA815_7432} | |
| 2. | MligTC455_02310 | 8 | 0.16 | Mlig455_053671 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_053671 {REF} {Length: 1055} {Pfam: RNase H [PF00075.26, score=33.8]} {RNA1310_24973} {RNA815_7432} | |
| 3. | MligTC455_07568 | 59 | 1.24 | Mlig455_050176 | Neo: - Age: - Region-enriched R4: 5.685/0.01793 |
1.822 | - | - | - | - | 0.970 | 0.852 | Mlig455_050176 {REF} {Length: 797} {RNA1509_50562} {RNA1310_122277} | |
| 4. | MligTC455_07567 | 40 | 0.83 | Mlig455_023577 | Neo: - Age: - |
1.755 | - | - | - | - | 0.978 | 0.777 | Mlig455_023577 {REF} {Length: 793} {RNA1509_50562} {RNA1310_122277} | |
| 5. | MligTC455_21503 | 91 | 1.9 | Mlig455_060363 | Neo: - Age: logFC(26M/2M)=-0.610 Region-enriched R3: 3.879/0.02529 |
SCNN1B | 0.974 | - | - | - | - | - | 0.974 | Mlig455_060363 {REF} {Length: 2727} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=186.9]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=65.5, Expect=2e-10]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_25838_0_1, dd_Smed_v6_25838_0_1, [Score=228, Expect=4e-67]} {RNA1509_50861} {RNA1310_9992, RNA1509_50861} {RNA1509_50861, RNA815_21795} |
| 6. | MligTC455_02469 | 44 | 0.92 | Mlig455_059893 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_059893 {REF} {Length: 2020} {RNA1509_51009} {RNA1310_40426} {RNA815_21300} | |
| 7. | MligTC455_26099 | 48 | 1 | Mlig455_009302, Mlig455_009311 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_009302 {REF} {Length: 1235} {RNA1509_41127} {RNA1310_52145.2} {RNA815_42871} Mlig455_009311 {REF} {Length: 1018} {RNA1509_41127} {RNA1310_52145.2} {RNA815_42871} |
|
| 8. | MligTC455_11235 | 13 | 0.26 | Mlig455_026890 | Neo: - Age: - |
PTGER4 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_026890 {REF} {Length: 2613} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=63.3]} {Human: ENSG00000171522, PTGER4, prostaglandin E receptor 4, [RH, Score=145, Expect=3e-37]} {Mouse: ENSMUSG00000039942, Ptger4, prostaglandin E receptor 4 (subtype EP4), [RH, Score=136, Expect=3e-34]} {Dmel: FBgn0036742, CG7497, [RH, Score=51.6, Expect=1e-06]} {RNA1310_91860} |
| 9. | MligTC455_10253 | 5 | 0.11 | Mlig455_063395 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_063395 {REF} {Length: 726} {NoTransDecoderORF} {RNA1310_48260} |
Berezikov Lab - 2020-2021 © ERIBA