M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_02739

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_02739 17 0.36 Mlig455_050666

Neo: -

Age: -

 Mlig455_050666 {REF} {Length: 1033} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.9]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}

Cumulative graph for MligTC455_02739

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.44 0.672 0.99971 1.00000
RegionR2 0.683 0.672 0.65440 0.98822
RegionR3 -1.047 0.672 0.99943 1.00000
RegionR4 -0.63 0.672 0.81532 1.00000
RegionR5 -1.411 0.672 0.99939 1.00000
RegionR6 5.22 0.672 0.26041 0.84808
RegionR7 -0.837 0.672 0.99947 1.00000
RegionR8 -0.538 0.672 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.165 0.672 1.00000 1.00000
RegenerationR2 0.735 0.672 0.69145 0.95337
RegenerationR3 -0.249 0.672 1.00000 1.00000
RegenerationR4 -1.204 0.672 0.36015 0.78723
RegenerationR5 1.444 0.672 0.75067 0.97221
RegenerationR6 -5.817 0.672 0.14604 0.46813
RegenerationBL -2.376 0.672 0.99953 1.00000
RegenerationTP 1.749 0.672 0.77512 1.00000


Genes with expression patterns similar to MligTC455_02739

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_02739 17 0.36 Mlig455_050666

Neo: -

Age: -

 2 1.000 - - - 1.000 - Mlig455_050666 {REF} {Length: 1033} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.9]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}
2. MligTC455_10386 40 0.84 Mlig455_016460, Mlig455_016526, Mlig455_049813

Neo: -

Age: Up-Down-Down

 CHRNA2, CHRNA6 1.835 0.950 - - - 0.885 -

Mlig455_016460 {REF} {Length: 2441} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=211, Expect=9e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=5e-56]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=214, Expect=3e-62]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=211, Expect=1e-60]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=216, Expect=6e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=210, Expect=8e-61]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=5e-148]} {RNA1310_41035} {RNA815_43177}

Mlig455_016526 {REF} {Length: 2438} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=211, Expect=8e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=6e-56]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=214, Expect=4e-62]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=211, Expect=1e-60]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=216, Expect=6e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=210, Expect=8e-61]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=4e-148]} {RNA1310_41035} {RNA815_43177}

Mlig455_049813 {REF} {Length: 2457} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.6]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=5e-60]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=207, Expect=1e-59]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=6e-57]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=3e-57]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-57]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=6e-56]} {Mouse: ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=213, Expect=1e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=212, Expect=1e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=204, Expect=2e-58]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=203, Expect=6e-57]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=217, Expect=4e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=209, Expect=1e-60]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=3e-148]} {RNA1310_41035} {RNA815_43177}
3. MligTC455_37096 119 2.49 Mlig455_050902

Neo: -

Age: -

Region-enriched R6: 4.558/0.00557

 PXDN 0.995 0.995 - - - - - Mlig455_050902 {REF} {Length: 3987} {Pfam: Animal haem peroxidase [PF03098.17, score=504.8]; Immunoglobulin domain [PF13927.8, score=48.3]; Immunoglobulin I-set domain [PF07679.18, score=46.6]; Immunoglobulin domain [PF00047.27, score=29.7]; Immunoglobulin domain [PF13895.8, score=20.9]} {Human: ENSG00000130508, PXDN, peroxidasin, [Score=452, Expect=3e-139]} {Mouse: ENSMUSG00000020674, Pxdn, peroxidasin, [Score=446, Expect=4e-138]} {Dmel: FBgn0011828, Pxn, Peroxidasin, [Score=424, Expect=6e-129]} {Celegans: WBGene00004256, pxn-1, Peroxidasin homolog, [Score=403, Expect=8e-123]} {Smed: dd_Smed_v6_3603_0_1, dd_Smed_v6_3603_0_1, [Score=499, Expect=7e-160]} {RNA1509_8453} {RNA1310_4027} {RNA815_967.1}
4. MligTC455_07822 103 2.14 Mlig455_009973

Neo: -

Age: -

Region-enriched R6: 8.220/0.00000

 0.992 0.992 - - - - - Mlig455_009973 {REF} {Length: 1584} {RNA1310_20970} {RNA815_31710}
5. MligTC455_18525 187 3.9 Mlig455_011761, Mlig455_047975, Mlig455_066356, Mlig455_066357

Neo: -

Age: -

 HAL 0.991 0.991 - - - - -

Mlig455_011761 {REF} {Length: 2777} {Pfam: Aromatic amino acid lyase [PF00221.21, score=630.6]} {Human: ENSG00000084110, HAL, histidine ammonia-lyase, [RH, Score=834, Expect=0.0]} {Mouse: ENSMUSG00000020017, Hal, histidine ammonia lyase, [RH, Score=839, Expect=0.0]} {Celegans: WBGene00009813, haly-1, Histidine ammonia-lyase, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_2219_0_1, dd_Smed_v6_2219_0_1, [RH, Score=455, Expect=2e-156]} {RNA1509_12711} {RNA1310_10590} {RNA815_24023}

Mlig455_047975 {REF} {Length: 3006} {Pfam: Aromatic amino acid lyase [PF00221.21, score=630.6]} {Human: ENSG00000084110, HAL, histidine ammonia-lyase, [RH, Score=834, Expect=0.0]} {Mouse: ENSMUSG00000020017, Hal, histidine ammonia lyase, [RH, Score=839, Expect=0.0]} {Celegans: WBGene00009813, haly-1, Histidine ammonia-lyase, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_2219_0_1, dd_Smed_v6_2219_0_1, [RH, Score=455, Expect=2e-156]} {RNA1509_12711} {RNA1310_10590, RNA1509_12711} {RNA1509_12711, RNA815_24023}

Mlig455_066356 {REF} {Length: 262} {Pfam: Aromatic amino acid lyase [PF00221.21, score=93.1]} {Human: ENSG00000084110, HAL, histidine ammonia-lyase, [Score=119, Expect=4e-33]} {Mouse: ENSMUSG00000020017, Hal, histidine ammonia lyase, [Score=122, Expect=4e-34]} {Celegans: WBGene00009813, haly-1, Histidine ammonia-lyase, [Score=102, Expect=2e-27]} {Smed: dd_Smed_v6_2219_0_1, dd_Smed_v6_2219_0_1, [Score=133, Expect=1e-39]} {RNA1509_25146} {RNA1310_10590} {RNA815_24023}

Mlig455_066357 {REF} {Length: 1013} {Pfam: Aromatic amino acid lyase [PF00221.21, score=49.5]} {Human: ENSG00000084110, HAL, histidine ammonia-lyase, [Score=125, Expect=3e-34]} {Mouse: ENSMUSG00000020017, Hal, histidine ammonia lyase, [Score=124, Expect=3e-33]} {Celegans: WBGene00009813, haly-1, Histidine ammonia-lyase, [Score=104, Expect=1e-26]} {Smed: dd_Smed_v6_2219_0_1, dd_Smed_v6_2219_0_1, [Score=106, Expect=3e-28]} {RNA1509_25146} {RNA1310_10590} {RNA815_24023}
6. MligTC455_53341 1321 27.52 Mlig455_026459, Mlig455_044751

Neo: -

Age: -

Region-enriched R7: 7.097/0.00000
Region-enriched R6: 5.503/0.00114

Regeneration-downregulated BL: -10.182

Regeneration-depleted BL: -10.182

 0.987 0.987 - - - - -

Mlig455_026459 {REF} {Length: 739} {RNA1509_35464} {RNA1310_60456.2} {RNA815_44529}

Mlig455_044751 {REF} {Length: 902} {RNA1509_35464} {RNA1310_60456.2, RNA1509_35464} {RNA1509_35464, RNA815_44529}
7. MligTC455_33806 93 1.94 Mlig455_009560

Neo: -

Age: Up-Down-Up

Region-enriched R6: 5.229/0.00001

 MOXD1 0.985 0.985 - - - - - Mlig455_009560 {REF} {Length: 2463} {Pfam: Copper type II ascorbate-dependent monooxygenase, N-terminal domain [PF01082.22, score=94.2]; Copper type II ascorbate-dependent monooxygenase, C-terminal domain [PF03712.17, score=54.5]} {Human: ENSG00000079931, MOXD1, monooxygenase DBH like 1, [Score=110, Expect=1e-24]} {Mouse: ENSMUSG00000020000, Moxd1, monooxygenase, DBH-like 1, [Score=115, Expect=1e-26]} {Dmel: FBgn0010329, Tbh, Tyramine beta hydroxylase, [Score=124, Expect=2e-29]} {Celegans: WBGene00006541, tbh-1, Tyramine beta-hydroxylase, [Score=134, Expect=6e-33]} {Smed: dd_Smed_v6_42610_0_1, dd_Smed_v6_42610_0_1, [Score=115, Expect=6e-28]} {RNA1509_32991} {RNA1310_25882} {RNA815_12058}
8. MligTC455_37927 29 0.59 Mlig455_005071, Mlig455_014052, Mlig455_025140, Mlig455_039469, Mlig455_070126

Neo: -

Age: -

 0.985 0.985 - - - - -

Mlig455_005071 {REF} {Length: 965} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=28.7]; Myb/SANT-like DNA-binding domain [PF13837.8, score=20.2]} {RNA1310_46038}

Mlig455_014052 {REF} {Length: 1489} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=32.8]; Myb/SANT-like DNA-binding domain [PF13837.8, score=22.5]} {RNA1310_68333}

Mlig455_025140 {REF} {Length: 761} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=35.9]; Myb/SANT-like DNA-binding domain [PF13837.8, score=23.0]} {RNA1310_46038}

Mlig455_039469 {REF} {Length: 1212} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=25.1]} {RNA1310_46038} {RNA815_30681}

Mlig455_070126 {REF} {Length: 1489} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=32.8]; Myb/SANT-like DNA-binding domain [PF13837.8, score=22.5]} {RNA1310_68333}
9. MligTC455_47733 81 1.69 Mlig455_044125

Neo: -

Age: logFC(26M/2M)=0.424

Region-enriched R6: 4.050/0.00363
Region-enriched R7: 3.654/0.01203

Regeneration-downregulated R6: -6.610

Regeneration-depleted R6: -6.610

 0.985 0.985 - - - - - Mlig455_044125 {REF} {Length: 4219} {Pfam: Peptidase family M13 [PF05649.15, score=42.8]} {RNA1310_43623} {RNA815_36140}
10. MligTC455_13729 55 1.15 Mlig455_025374, Mlig455_025422

Neo: -

Age: Up-Down-Up

 0.983 0.983 - - - - -

Mlig455_025374 {REF} {Length: 2416} {Pfam: Innexin [PF00876.20, score=384.4]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=107, Expect=2e-25]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=358, Expect=8e-122]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [Score=351, Expect=1e-117]} {RNA1310_71151} {RNA815_44601}

Mlig455_025422 {REF} {Length: 2321} {Pfam: Innexin [PF00876.20, score=381.6]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=105, Expect=4e-25]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=355, Expect=1e-120]} {Smed: dd_Smed_v6_11077_0_1, dd_Smed_v6_11077_0_1, [Score=358, Expect=9e-121]} {RNA1310_71151} {RNA815_44601}
11. MligTC455_34886 2093 43.6 Mlig455_064083

Neo: -

Age: Up-Down-Down

Region-specific R6: 7.007

Region-enriched R6: 7.819/0.00000

 ZAN 0.983 0.983 - - - - - Mlig455_064083 {REF} {Length: 17387} {Pfam: von Willebrand factor type A domain [PF00092.30, score=31.8]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=86.7, Expect=2e-15]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=76.3, Expect=2e-12]; ENSMUSG00000047730, Fcgbp, Fc fragment of IgG binding protein, [Score=72.8, Expect=2e-11]} {Smed: dd_Smed_v6_91_0_1, dd_Smed_v6_91_0_1, [Score=224, Expect=8e-58]} {RNA1509_265, RNA1509_35674} {RNA1310_18.1, RNA1509_35674} {RNA1509_35674, RNA815_11}
12. MligTC455_36190 239 4.99 Mlig455_011419

Neo: -

Age: -

Region-enriched R6: 8.371/0.00000

 GLIPR1 0.983 0.983 - - - - - Mlig455_011419 {REF} {Length: 1624} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=61.8]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000078949, R3hdml, R3H domain containing-like, [Score=73.2, Expect=3e-14]; ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=70.9, Expect=6e-13]} {Dmel: FBgn0038126, CG8483, [Score=72.0, Expect=1e-13]} {Celegans: WBGene00015246, scl-23, SCP-Like extracellular protein, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [Score=96.3, Expect=3e-23]} {RNA1509_16373} {RNA1310_19845.1} {RNA815_8030}
13. MligTC455_15441 62 1.29 Mlig455_037158

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_037158 {REF} {Length: 2997} {Pfam: RNA repair pathway DNA polymerase beta family [PF10127.11, score=20.8]} {RNA1509_39460} {RNA1310_16073.2} {RNA815_15926}
14. MligTC455_22577 13 0.27 Mlig455_058663, Mlig455_058678

Neo: -

Age: -

 0.975 0.975 - - - - -

Mlig455_058663 {REF} {Length: 467} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41224} {RNA1310_32946.2} {RNA815_39194}

Mlig455_058678 {REF} {Length: 467} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41224} {RNA1310_32946.2} {RNA815_39194}
15. MligTC455_45467 192 4 Mlig455_050191, Mlig455_066984

Neo: -

Age: -

 ANKFN1 0.972 - - - - 0.972 -

Mlig455_050191 {REF} {Length: 3774} {RNA1310_116740} {RNA815_60563}

Mlig455_066984 {REF} {Length: 4097} {Human: ENSG00000153930, ANKFN1, ankyrin repeat and fibronectin type III domain containing 1, [RH, Score=213, Expect=7e-56]} {Mouse: ENSMUSG00000047773, Ankfn1, ankyrin-repeat and fibronectin type III domain containing 1, [RH, Score=200, Expect=6e-52]} {Dmel: FBgn0266418, wake, wide awake, [Score=177, Expect=9e-45]} {Celegans: WBGene00019935, R07E4.1, [RH, Score=139, Expect=3e-33]} {Smed: dd_Smed_v6_6406_0_1, dd_Smed_v6_6406_0_1, [Score=265, Expect=4e-73]} {RNA1310_116740} {RNA815_60563}
16. MligTC455_35870 19 0.4 Mlig455_065478

Neo: -

Age: -

 0.971 0.971 - - - - - Mlig455_065478 {REF} {Length: 942} {RNA1310_89037}
17. MligTC455_36758 1551 32.3 Mlig455_034048

Neo: -

Age: Up-Down-Down

Region-enriched R6: 7.207/0.00000

 0.971 0.971 - - - - - Mlig455_034048 {REF} {Length: 7277} {Smed: dd_Smed_v6_52973_0_1, dd_Smed_v6_52973_0_1, [Score=106, Expect=4e-23]} {RNA1509_301} {RNA1310_15} {RNA815_1011.1}
18. MligTC455_18814 44 0.91 Mlig455_001664

Neo: -

Age: Up-Down-Up

 0.969 0.969 - - - - - Mlig455_001664 {REF} {Length: 1673} {Smed: dd_Smed_v6_18585_0_1, dd_Smed_v6_18585_0_1, [Score=100, Expect=1e-23]} {RNA1310_49005} {RNA815_48672}
19. MligTC455_11193 38 0.79 Mlig455_061638

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.100

 GABRA6 0.967 0.967 - - - - - Mlig455_061638 {REF} {Length: 1770} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=160.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=102.2]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=301, Expect=1e-97]; ENSG00000151834, GABRA2, gamma-aminobutyric acid type A receptor alpha2 subunit, [RH, Score=300, Expect=7e-97]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=290, Expect=5e-93]; ENSG00000022355, GABRA1, gamma-aminobutyric acid type A receptor alpha1 subunit, [RH, Score=290, Expect=7e-93]; ENSG00000011677, GABRA3, gamma-aminobutyric acid type A receptor alpha3 subunit, [RH, Score=286, Expect=3e-91]; ENSG00000109158, GABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, [RH, Score=286, Expect=3e-90]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [RH, Score=303, Expect=2e-98]; ENSMUSG00000000560, Gabra2, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2, [RH, Score=300, Expect=3e-97]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=290, Expect=6e-93]; ENSMUSG00000010803, Gabra1, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1, [RH, Score=289, Expect=6e-93]} {Dmel: FBgn0030707, CG8916, [Score=323, Expect=1e-105]} {Celegans: WBGene00013914, lgc-37, Ligand-Gated ion Channel, [RH, Score=300, Expect=3e-97]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [RH, Score=429, Expect=3e-148]} {RNA1310_23972} {RNA815_15667.1}
20. MligTC455_02837 29 0.61 Mlig455_004700

Neo: -

Age: -

Region-enriched R6: 6.687/0.01418

 0.966 0.966 - - - - - Mlig455_004700 {REF} {Length: 1630} {RNA1509_44223} {RNA1310_194.1} {RNA815_27158}
21. MligTC455_37167 94 1.97 Mlig455_051119, Mlig455_068293

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_051119 {REF} {Length: 1310} {NoTransDecoderORF} {RNA1310_80822}

Mlig455_068293 {REF} {Length: 276} {NoTransDecoderORF} {RNA1310_69701.1}
22. MligTC455_17565 85 1.77 Mlig455_054318

Neo: -

Age: -

Region-enriched R2: 6.111/0.00708

 0.963 - - - - 0.963 - Mlig455_054318 {REF} {Length: 550} {RNA1310_73705} {RNA815_38857}
23. MligTC455_02903 85 1.78 Mlig455_034050

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.689

Region-enriched R6: 6.316/0.00001

 0.962 0.962 - - - - - Mlig455_034050 {REF} {Length: 403} {Smed: dd_Smed_v6_1636_0_1, dd_Smed_v6_1636_0_1, [Score=62.4, Expect=3e-11]} {RNA1509_301} {RNA1310_15} {RNA815_90}
24. MligTC455_22736 174 3.62 Mlig455_036576

Neo: -

Age: -

Region-enriched R6: 5.263/0.00000
Region-enriched R7: 4.741/0.00000

Regeneration-depleted R6: -8.651
Regeneration-depleted BL: -7.996

 PHEX 0.962 0.962 - - - - - Mlig455_036576 {REF} {Length: 3336} {Pfam: Peptidase family M13 [PF01431.23, score=134.4]; Peptidase family M13 [PF05649.15, score=87.9]} {Human: ENSG00000102174, PHEX, phosphate regulating endopeptidase homolog X-linked, [Score=155, Expect=1e-38]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=154, Expect=3e-38]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=154, Expect=2e-38]; ENSG00000196549, MME, membrane metalloendopeptidase, [Score=148, Expect=2e-36]} {Mouse: ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=152, Expect=6e-38]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=152, Expect=8e-38]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=148, Expect=1e-36]; ENSMUSG00000057457, Phex, phosphate regulating endopeptidase homolog, X-linked, [Score=146, Expect=6e-36]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=135, Expect=2e-32]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=155, Expect=4e-39]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=149, Expect=3e-37]} {RNA1509_47798} {RNA1310_6773, RNA1509_47798} {RNA1509_47798, RNA815_4414}
25. MligTC455_32522 134 2.8 Mlig455_040944

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_040944 {REF} {Length: 2473} {RNA1509_46835} {RNA1310_21335.2} {RNA815_21965}
26. MligTC455_16014 135 2.81 Mlig455_057808

Neo: -

Age: -

 SLC6A3 0.96 0.960 - - - - - Mlig455_057808 {REF} {Length: 3595} {tRNA: Undet(NNN),pseudo, score=28.6} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=586.5]} {Human: ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [Score=521, Expect=1e-177]; ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [Score=521, Expect=1e-177]; ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [Score=505, Expect=1e-171]} {Mouse: ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=523, Expect=1e-178]; ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [Score=511, Expect=3e-174]} {Dmel: FBgn0010414, SerT, Serotonin transporter, [Score=468, Expect=2e-157]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=433, Expect=4e-144]} {Smed: dd_Smed_v6_22486_0_1, dd_Smed_v6_22486_0_1, [RH, Score=571, Expect=0.0]} {RNA1509_41282} {RNA1310_11169, RNA1509_41282} {RNA1509_41282, RNA815_3966}
27. MligTC455_32201 49 1.03 Mlig455_026554

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_026554 {REF} {Length: 2504} {Pfam: CENP-B N-terminal DNA-binding domain [PF04218.15, score=24.6]} {RNA1310_5930} {RNA815_21829}
28. MligTC455_53656 27 0.57 Mlig455_033327

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_033327 {REF} {Length: 1116} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=43.9, Expect=6e-06]} {RNA1509_48973} {RNA1310_39833} {RNA815_36286}
29. MligTC455_29361 135 2.82 Mlig455_037251

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_037251 {REF} {Length: 608} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38215} {RNA1310_46814} {RNA815_22703.1}
30. MligTC455_06856 18 0.37 Mlig455_022133

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_022133 {REF} {Length: 440}
31. MligTC455_52788 41 0.86 Mlig455_016296

Neo: -

Age: -

 FCN1 0.954 - - - - 0.954 - Mlig455_016296 {REF} {Length: 1559} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=167.4]} {Human: ENSG00000085265, FCN1, ficolin 1, [Score=141, Expect=2e-39]; ENSG00000160339, FCN2, ficolin 2, [Score=139, Expect=3e-39]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=134, Expect=2e-35]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=135, Expect=4e-37]} {Dmel: FBgn0003326, sca, scabrous, [RH, Score=128, Expect=4e-33]} {Celegans: WBGene00020516, T15B7.1, [Score=59.3, Expect=6e-10]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=110, Expect=4e-27]} {RNA1310_57278} {RNA815_33549}
32. MligTC455_15150 7 0.14 Mlig455_034554, Mlig455_041521

Neo: Int S/G2/M

Age: Up-Down-Down

 ELAVL1, ELAVL2 0.953 - - - - 0.953 -

Mlig455_034554 {REF} {Length: 2981} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=175.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=122.3]} {Human: ENSG00000066044, ELAVL1, ELAV like RNA binding protein 1, [Score=132, Expect=2e-33]; ENSG00000135094, SDS, serine dehydratase, [Score=126, Expect=4e-31]} {Mouse: ENSMUSG00000029596, Sdsl, serine dehydratase-like, [Score=145, Expect=8e-38]; ENSMUSG00000029597, Sds, serine dehydratase, [Score=141, Expect=1e-36]} {Dmel: FBgn0086675, fne, found in neurons, [Score=152, Expect=3e-40]} {Celegans: WBGene00001368, exc-7, [Score=139, Expect=3e-35]} {Smed: dd_Smed_v6_2842_0_1, dd_Smed_v6_2842_0_1, [Score=158, Expect=7e-40]} {RNA1509_17790, RNA1509_5868} {RNA1310_3456.1, RNA1509_17790} {RNA1509_17790, RNA815_18672}

Mlig455_041521 {REF} {Length: 989} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=54.9]} {Human: ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [Score=92.8, Expect=4e-24]; ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [Score=90.5, Expect=6e-22]} {Mouse: ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [Score=92.8, Expect=6e-25]; ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [Score=91.7, Expect=2e-24]} {Dmel: FBgn0086675, fne, found in neurons, [Score=80.5, Expect=1e-18]} {Celegans: WBGene00001368, exc-7, [Score=80.5, Expect=1e-18]} {Smed: dd_Smed_v6_11311_0_1, dd_Smed_v6_11311_0_1, [Score=73.9, Expect=2e-17]} {RNA1509_5868} {RNA1310_4967.2} {RNA815_50264}
33. MligTC455_22737 119 2.47 Mlig455_057775

Neo: -

Age: Down-Up-Down

Region-enriched R6: 5.005/0.00000
Region-enriched R7: 4.876/0.00000

Regeneration-downregulated R6: -7.253

Regeneration-depleted R6: -7.253

 MMEL1 0.953 0.953 - - - - - Mlig455_057775 {REF} {Length: 3495} {Pfam: Peptidase family M13 [PF01431.23, score=134.6]; Peptidase family M13 [PF05649.15, score=84.7]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=164, Expect=1e-41]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=164, Expect=1e-41]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=154, Expect=3e-38]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=152, Expect=4e-38]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=150, Expect=3e-37]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=138, Expect=2e-33]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=156, Expect=2e-39]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=148, Expect=6e-37]} {RNA1509_47798} {RNA1310_6773} {RNA815_4414}
34. MligTC455_37914 71 1.47 Mlig455_058565

Neo: -

Age: -

 NANOS3 0.952 0.952 - - - - - Mlig455_058565 {REF} {Length: 1346} {Pfam: Nanos RNA binding domain [PF05741.15, score=84.7]} {Human: ENSG00000187556, NANOS3, nanos C2HC-type zinc finger 3, [RH, Score=73.2, Expect=5e-16]} {Mouse: ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [Score=77.0, Expect=3e-18]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [RH, Score=78.2, Expect=3e-17]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [Score=89.7, Expect=1e-22]} {RNA1310_114488}
35. MligTC455_17448 5 0.11 Mlig455_029739

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_029739 {REF} {Length: 758} {NoTransDecoderORF} {RNA1310_32263}
36. MligTC455_06102 9 0.19 Mlig455_016363

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_016363 {REF} {Length: 711} {NoTransDecoderORF} {RNA1310_76160} {RNA815_19899}
37. MligTC455_10178 77 1.6 Mlig455_017978

Neo: -

Age: -

Region-enriched R7: 6.377/0.00000

 GRM3 0.95 - - - - 0.950 - Mlig455_017978 {REF} {Length: 3464} {Pfam: Receptor family ligand binding region [PF01094.30, score=224.4]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=185.8]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=39.1]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [RH, Score=670, Expect=0.0]; ENSMUSG00000023192, Grm2, glutamate receptor, metabotropic 2, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [Score=725, Expect=0.0]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [RH, Score=803, Expect=0.0]} {RNA1310_41220}
38. MligTC455_17218 37 0.78 Mlig455_053853

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_053853 {REF} {Length: 1743} {RNA1310_61921}
39. MligTC455_39495 30 0.62 Mlig455_037087

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_037087 {REF} {Length: 1984} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=38.4]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=49.7, Expect=2e-06]} {RNA1310_19222} {RNA815_35367}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA