Data search
Results for MligTC455_03022
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_03022 | 1154 | 24.05 | Mlig455_020198 | Neo: - Age: - Regeneration-upregulated BL: 1.918 Regeneration-enriched BL: 1.918 |
SCAF8 | Mlig455_020198 {REF} {Length: 2582} {TRANSSPLICED} {Human: ENSG00000213079, SCAF8, SR-related CTD associated factor 8, [Score=69.3, Expect=2e-11]; ENSG00000156304, SCAF4, SR-related CTD associated factor 4, [Score=68.2, Expect=3e-11]} {Mouse: ENSMUSG00000022983, Scaf4, SR-related CTD-associated factor 4, [Score=70.1, Expect=6e-12]; ENSMUSG00000046201, Scaf8, SR-related CTD-associated factor 8, [Score=67.8, Expect=3e-11]} {Dmel: FBgn0034598, CG4266, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_6238_0_1, dd_Smed_v6_6238_0_1, [Score=68.2, Expect=9e-12]} {RNA1509_3721, RNA1509_53232} {RNA1310_3703, RNA1509_3721, RNA1509_53232} {RNA1509_3721, RNA1509_53232, RNA815_2558} |
Cumulative graph for MligTC455_03022
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.072 | 4.836 | 0.10473 | 0.67942 | |
| RegionR2 | 0.693 | 4.836 | 0.13769 | 0.46084 | |
| RegionR3 | 0.412 | 4.836 | 0.28610 | 0.82803 | |
| RegionR4 | 0.322 | 4.836 | 0.45588 | 0.78411 | |
| RegionR5 | 0.74 | 4.836 | 0.02877 | 0.12589 | |
| RegionR6 | 0.548 | 4.836 | 0.15141 | 0.69369 | |
| RegionR7 | -0.123 | 4.836 | 0.81959 | 1.00000 | |
| RegionR8 | -0.52 | 4.836 | 0.46042 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.494 | 4.836 | 0.81354 | 1.00000 | |
| RegenerationR2 | 0.028 | 4.836 | 0.93920 | 1.00000 | |
| RegenerationR3 | 0.523 | 4.836 | 0.19910 | 0.63374 | |
| RegenerationR4 | 0.487 | 4.836 | 0.24059 | 0.68924 | |
| RegenerationR5 | 0.503 | 4.836 | 0.17755 | 0.60676 | |
| RegenerationR6 | 1.348 | 4.836 | 0.00051 | 0.02369 | |
| RegenerationBL | 1.918 | 4.836 | 0.00000 | 0.00044 | Specific for BL: 1.918 |
| RegenerationTP | 1.262 | 4.836 | 0.01677 | 0.22240 |
Genes with expression patterns similar to MligTC455_03022
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_03022 | 1154 | 24.05 | Mlig455_020198 | Neo: - Age: - Regeneration-upregulated BL: 1.918 Regeneration-enriched BL: 1.918 |
SCAF8 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020198 {REF} {Length: 2582} {TRANSSPLICED} {Human: ENSG00000213079, SCAF8, SR-related CTD associated factor 8, [Score=69.3, Expect=2e-11]; ENSG00000156304, SCAF4, SR-related CTD associated factor 4, [Score=68.2, Expect=3e-11]} {Mouse: ENSMUSG00000022983, Scaf4, SR-related CTD-associated factor 4, [Score=70.1, Expect=6e-12]; ENSMUSG00000046201, Scaf8, SR-related CTD-associated factor 8, [Score=67.8, Expect=3e-11]} {Dmel: FBgn0034598, CG4266, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_6238_0_1, dd_Smed_v6_6238_0_1, [Score=68.2, Expect=9e-12]} {RNA1509_3721, RNA1509_53232} {RNA1310_3703, RNA1509_3721, RNA1509_53232} {RNA1509_3721, RNA1509_53232, RNA815_2558} |
| 2. | MligTC455_03564 | 936 | 19.51 | Mlig455_064392 | Neo: Neoblast Age: Up-Down-Up |
POLR2B | 1.687 | - | - | - | 0.971 | 0.716 | - | Mlig455_064392 {REF} {Length: 4288} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603} |
| 3. | MligTC455_39146 | 894 | 18.62 | Mlig455_031475 | Neo: Int S/G2/M Age: - |
1.663 | - | - | - | 0.952 | 0.711 | - | Mlig455_031475 {REF} {Length: 4141} {TRANSSPLICED} {Pfam: Putative aspartate racemase [PF14669.8, score=18.7]} {RNA1509_4947} {RNA1310_1498} {RNA815_4692} | |
| 4. | MligTC455_35133 | 712 | 14.83 | Mlig455_046669 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.296 Region-enriched R4: 1.168/0.02441 |
TOP1 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_046669 {REF} {Length: 3931} {TRANSSPLICED} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=326.0]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=269.1]; C-terminal topoisomerase domain [PF14370.8, score=48.5]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [Score=675, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [Score=652, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [Score=675, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [Score=636, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [Score=595, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_2, dd_Smed_v6_2421_0_2, [Score=610, Expect=0.0]} {RNA1509_23037, RNA1509_3610, RNA1509_43713} {RNA1310_7908.1, RNA1509_23037, RNA1509_3610, RNA1509_43713} {RNA1509_23037, RNA1509_3610, RNA1509_43713, RNA815_2481.2} |
| 5. | MligTC455_03675 | 1379 | 28.72 | Mlig455_050846 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.490/0.00000 Regeneration-upregulated BL: 1.734 Regeneration-enriched BL: 1.734 |
TSFM | 0.966 | - | - | - | 0.966 | - | - | Mlig455_050846 {REF} {Length: 1275} {TRANSSPLICED} {Pfam: Elongation factor TS [PF00889.21, score=68.9]} {Human: ENSG00000123297, TSFM, Ts translation elongation factor, mitochondrial, [RH, Score=141, Expect=2e-39]} {Mouse: ENSMUSG00000040521, Tsfm, Ts translation elongation factor, mitochondrial, [RH, Score=139, Expect=6e-39]} {Dmel: FBgn0032646, mEFTs, mitochondrial translation elongation factor Ts, [RH, Score=154, Expect=9e-45]} {Celegans: WBGene00010094, tsfm-1, Elongation factor Ts, mitochondrial, [RH, Score=144, Expect=4e-41]} {Smed: dd_Smed_v6_4240_0_1, dd_Smed_v6_4240_0_1, [RH, Score=150, Expect=2e-43]} {RNA1509_10753, RNA1509_39902, RNA1509_52578} {RNA1310_24906.1, RNA1509_10753, RNA1509_39902, RNA1509_52578} {RNA1509_10753, RNA1509_39902, RNA1509_52578, RNA815_11915} |
| 6. | MligTC455_26904 | 538 | 11.21 | Mlig455_015418 | Neo: Irradiation Age: - Region-specific R5: 2.304 Region-enriched R5: 2.167/0.00000 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_015418 {REF} {Length: 4154} {Smed: dd_Smed_v6_9588_0_1, dd_Smed_v6_9588_0_1, [Score=52.4, Expect=8e-07]} {RNA1509_21206, RNA1509_57923} {RNA1310_6114, RNA1509_57923} {RNA1509_57923, RNA815_10266} | |
| 7. | MligTC455_44519 | 289 | 6.01 | Mlig455_044327 | Neo: - Age: - |
BNC2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_044327 {REF} {Length: 3741} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3512) [PF12024.10, score=56.1]; C2H2-type zinc finger [PF13894.8, score=21.9]} {Human: ENSG00000173068, BNC2, basonuclin 2, [Score=82.0, Expect=1e-15]; ENSG00000169594, BNC1, basonuclin 1, [Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000028487, Bnc2, basonuclin 2, [Score=82.4, Expect=8e-16]; ENSMUSG00000025105, Bnc1, basonuclin 1, [Score=81.6, Expect=1e-15]} {Dmel: FBgn0285879, disco-r, disco-related, [Score=63.9, Expect=3e-10]} {Celegans: WBGene00007256, swsn-9, SWI/SNF nucleosome remodeling complex component, [Score=52.0, Expect=8e-07]} {Smed: dd_Smed_v6_8872_0_1, dd_Smed_v6_8872_0_1, [RH, Score=66.2, Expect=3e-11]} {RNA1509_19621} {RNA1310_14638, RNA1509_19621} {RNA1509_19621, RNA815_16614} |
| 8. | MligTC455_19942 | 770 | 16.04 | Mlig455_045672 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.530/0.00045 Regeneration-upregulated BL: 2.332 Regeneration-enriched BL: 2.332 |
RNPS1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_045672 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.9]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=6e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=88.2, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=103, Expect=1e-25]} {RNA1509_14792} {RNA1310_28374, RNA1509_14792} {RNA1509_14792, RNA815_13087} |
| 9. | MligTC455_40013 | 1551 | 32.32 | Mlig455_045254, Mlig455_069174 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.916/0.00000 Regeneration-upregulated BL: 1.957 Regeneration-enriched BL: 1.957 |
MCM5 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_045254 {REF} {Length: 2658} {Pfam: MCM P-loop domain [PF00493.25, score=329.8]; MCM OB domain [PF17207.5, score=115.3]; MCM AAA-lid domain [PF17855.3, score=92.5]; MCM N-terminal domain [PF14551.8, score=58.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=25.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=800, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=834, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726} Mlig455_069174 {REF} {Length: 3194} {Pfam: MCM P-loop domain [PF00493.25, score=329.3]; MCM OB domain [PF17207.5, score=114.9]; MCM AAA-lid domain [PF17855.3, score=92.4]; MCM N-terminal domain [PF14551.8, score=57.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.9]; Endonuclease-reverse transcriptase [PF14529.8, score=21.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.1]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=932, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=803, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=833, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726} |
| 10. | MligTC455_52610 | 2169 | 45.19 | Mlig455_008639 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.168 Region-enriched R5: 1.020/0.00000 |
PA2G4 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_008639 {REF} {Length: 3279} {Pfam: Metallopeptidase family M24 [PF00557.26, score=72.2]} {Human: ENSG00000170515, PA2G4, proliferation-associated 2G4, [RH, Score=416, Expect=3e-144]} {Mouse: ENSMUSG00000025364, Pa2g4, proliferation-associated 2G4, [RH, Score=420, Expect=7e-146]} {Dmel: FBgn0035630, CG10576, [RH, Score=385, Expect=3e-132]} {Celegans: WBGene00021088, W08E12.7, [RH, Score=345, Expect=4e-117]} {Smed: dd_Smed_v6_2102_0_1, dd_Smed_v6_2102_0_1, [RH, Score=355, Expect=4e-121]} {RNA1509_21937} {RNA1310_16489.1} {RNA815_7518} |
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