TomoSeq data search

Data search

Results for MligTC455_03093

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_03093	5	0.10	Mlig455_010822	Neo: - Age: -		Mlig455_010822 {REF} {Length: 620} {RNA1310_26670} {RNA815_12882}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_03093

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_03093

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_02351	7	0.15	Mlig455_054186	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_054186 {REF} {Length: 1620} {RNA1509_45595} {RNA1310_92506} {RNA815_42262}
2.	MligTC455_03093	5	0.1	Mlig455_010822	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_010822 {REF} {Length: 620} {RNA1310_26670} {RNA815_12882}
3.	MligTC455_22517	1	0.02	Mlig455_047375	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_047375 {REF} {Length: 158} {NoTransDecoderORF} {RNA1310_123904}
4.	MligTC455_46335	4	0.09	Mlig455_065243	Neo: - Age: Up-Down-Down	FAM13A	1	-	-	-	-	-	1.000	Mlig455_065243 {REF} {Length: 3502} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=137.5]} {Human: ENSG00000138640, FAM13A, family with sequence similarity 13 member A, [RH, Score=135, Expect=1e-31]} {Mouse: ENSMUSG00000037709, Fam13a, family with sequence similarity 13, member A, [RH, Score=125, Expect=6e-29]} {Dmel: FBgn0028494, CG6424, [RH, Score=92.8, Expect=8e-19]} {Celegans: WBGene00008006, tag-325, WW domain-containing protein tag-325, [Score=91.3, Expect=1e-19]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [RH, Score=180, Expect=2e-46]} {RNA1509_4340} {RNA1310_2121} {RNA815_16484}
5.	MligTC455_19221	36	0.76	Mlig455_000134	Neo: - Age: Up-Down-Up	GUCY2D	0.998	-	-	-	-	-	0.998	Mlig455_000134 {REF} {Length: 4115} {Pfam: PBP superfamily domain [PF12849.9, score=117.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.4]; Protein kinase domain [PF00069.27, score=86.0]; Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=28.0]} {Human: ENSG00000132518, GUCY2D, guanylate cyclase 2D, retinal, [Score=140, Expect=6e-33]} {Mouse: ENSMUSG00000020890, Gucy2e, guanylate cyclase 2e, [Score=144, Expect=2e-34]} {Dmel: FBgn0051183, CG31183, [Score=160, Expect=4e-39]} {Celegans: WBGene00001531, gcy-4, Receptor-type guanylate cyclase gcy-4, [Score=135, Expect=8e-32]} {Smed: dd_Smed_v6_7644_0_1, dd_Smed_v6_7644_0_1, [Score=138, Expect=8e-33]} {RNA1310_30282} {RNA815_47191}
6.	MligTC455_05602	30	0.63	Mlig455_065994	Neo: - Age: -		0.995	-	-	-	-	-	0.995	Mlig455_065994 {REF} {Length: 458} {NoTransDecoderORF} {RNA1509_51863} {RNA1310_48164} {RNA815_9863}
7.	MligTC455_14104	5	0.1	Mlig455_031471	Neo: - Age: -	TMBIM4	0.995	-	-	-	-	-	0.995	Mlig455_031471 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Inhibitor of apoptosis-promoting Bax1 [PF01027.22, score=160.0]} {Human: ENSG00000155957, TMBIM4, transmembrane BAX inhibitor motif containing 4, [RH, Score=179, Expect=1e-55]} {Mouse: ENSMUSG00000020225, Tmbim4, transmembrane BAX inhibitor motif containing 4, [RH, Score=184, Expect=8e-58]} {Dmel: FBgn0013305, Nmda1, N-methyl-D-aspartate receptor-associated protein, [Score=120, Expect=1e-32]} {Celegans: WBGene00006479, tmbi-4, Transmembrane BAX inhibitor motif-containing protein 4, [RH, Score=141, Expect=5e-41]} {Smed: dd_Smed_v6_1521_0_1, dd_Smed_v6_1521_0_1, [RH, Score=214, Expect=5e-70]} {RNA1509_41965, RNA1509_5739} {RNA1310_38587, RNA1509_41965, RNA1509_5739} {RNA1509_41965, RNA1509_5739, RNA815_15216}
8.	MligTC455_03733	8	0.16	Mlig455_035037, Mlig455_035045	Neo: - Age: -		0.987	-	-	-	-	-	0.987	Mlig455_035037 {REF} {Length: 461} {NoTransDecoderORF} {RNA1509_59731} {RNA1310_69466} Mlig455_035045 {REF} {Length: 1533} {RNA1509_59731} {RNA1310_67103, RNA1509_59731} {RNA1509_59731, RNA815_10516}
9.	MligTC455_38527	4	0.08	Mlig455_055991	Neo: - Age: -		0.986	-	-	-	-	-	0.986	Mlig455_055991 {REF} {Length: 1536} {RNA1509_29577} {RNA1310_45785} {RNA815_35110}
10.	MligTC455_51133	88	1.84	Mlig455_069320	Neo: Irradiation Age: logFC(26M/2M)=0.963		0.986	-	-	-	-	-	0.986	Mlig455_069320 {REF} {Length: 1727} {RNA1509_1239, RNA1509_3377, RNA1509_42} {RNA1310_10769, RNA1509_1239, RNA1509_3377} {RNA1509_1239, RNA1509_3377, RNA815_3639}
11.	MligTC455_22396	27	0.56	Mlig455_046089, Mlig455_055875, Mlig455_070641	Neo: - Age: -		0.979	-	-	-	-	-	0.979	Mlig455_046089 {REF} {Length: 530} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1} Mlig455_055875 {REF} {Length: 907} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1} Mlig455_070641 {REF} {Length: 3113} {RNA1509_56212} {RNA1310_21871} {RNA815_25104.1}
12.	MligTC455_21920	37	0.77	Mlig455_031783	Neo: - Age: Up-Down-Down		0.967	-	-	-	-	-	0.967	Mlig455_031783 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14793} {RNA1310_585.1} {RNA815_122.1}
13.	MligTC455_32279	37	0.77	Mlig455_010823, Mlig455_010830	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_010823 {REF} {Length: 1312} {RNA1509_38619} {RNA1310_18833} {RNA815_8161} Mlig455_010830 {REF} {Length: 310} {NoTransDecoderORF} {RNA815_52640}
14.	MligTC455_08452	59	1.22	Mlig455_027354	Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.450 Region-enriched R5: 5.083/0.00002		0.962	-	-	-	-	-	0.962	Mlig455_027354 {REF} {Length: 1611} {RNA1509_42043} {RNA1310_19488} {RNA815_18221}
15.	MligTC455_35011	387	8.07	Mlig455_060710	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.676	CALML5	0.962	-	-	-	-	-	0.962	Mlig455_060710 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=51.8]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=42.7]; EF-hand domain pair [PF13833.8, score=41.2]; EF hand [PF13202.8, score=39.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.6]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=56.2, Expect=3e-10]} {Mouse: ENSMUSG00000005649, Cabp5, calcium binding protein 5, [Score=55.5, Expect=8e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=62.8, Expect=6e-13]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=50.4, Expect=2e-08]} {RNA1509_32665} {RNA1310_29494.2, RNA1509_32665} {RNA1509_32665, RNA815_16454.1}
16.	MligTC455_12397	18	0.37	Mlig455_021272	Neo: - Age: -	SCNN1G	0.961	-	-	-	-	-	0.961	Mlig455_021272 {REF} {Length: 2377} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=191.3]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=52.0, Expect=3e-06]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=49.7, Expect=1e-05]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=70.1, Expect=3e-12]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=103, Expect=7e-23]} {RNA1310_124026}
17.	MligTC455_52036	13	0.27	Mlig455_068246, Mlig455_068266	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_068246 {REF} {Length: 593} {NoTransDecoderORF} {RNA1509_46135} {RNA1310_32009.2} Mlig455_068266 {REF} {Length: 787} {NoTransDecoderORF} {RNA1509_46135} {RNA1310_32009.2}
18.	MligTC455_27604	8	0.17	Mlig455_048369	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_048369 {REF} {Length: 2832} {NoTransDecoderORF} {RNA1509_25664} {RNA1310_15630} {RNA815_31395}
19.	MligTC455_35707	9	0.19	Mlig455_024202	Neo: - Age: -	SLCO1B1	0.959	-	-	-	-	-	0.959	Mlig455_024202 {REF} {Length: 2447} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=297.9]} {Human: ENSG00000134538, SLCO1B1, solute carrier organic anion transporter family member 1B1, [Score=217, Expect=1e-60]; ENSG00000111700, SLCO1B3, solute carrier organic anion transporter family member 1B3, [Score=216, Expect=3e-60]; ENSG00000257046, AC011604.2, novel protein, [Score=208, Expect=6e-57]} {Mouse: ENSMUSG00000030236, Slco1b2, solute carrier organic anion transporter family, member 1b2, [Score=187, Expect=4e-50]; ENSMUSG00000030235, Slco1c1, solute carrier organic anion transporter family, member 1c1, [Score=183, Expect=1e-48]; ENSMUSG00000025790, Slco3a1, solute carrier organic anion transporter family, member 3a1, [Score=181, Expect=4e-48]} {Dmel: FBgn0050277, Oatp58Da, Organic anion transporting polypeptide 58Da, [Score=183, Expect=8e-49]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=154, Expect=6e-39]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [Score=267, Expect=8e-80]} {RNA1509_20304, RNA1509_48135} {RNA1310_3911.1, RNA1509_20304, RNA1509_48135} {RNA1509_20304, RNA1509_48135, RNA815_3098}
20.	MligTC455_19988	46	0.95	Mlig455_063753	Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 3.701/0.02989		0.956	-	-	-	-	-	0.956	Mlig455_063753 {REF} {Length: 1693} {RNA1509_36472} {RNA1310_18743, RNA1509_36472} {RNA1509_36472, RNA815_40714}
21.	MligTC455_11747	158	3.3	Mlig455_011110	Neo: Irradiation Age: - Region-enriched R5: 3.566/0.00000		0.954	-	-	-	-	-	0.954	Mlig455_011110 {REF} {Length: 2022} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=22.3]} {RNA1509_16212} {RNA1310_23116} {RNA815_8985.1}
22.	MligTC455_15220	241	5.02	Mlig455_029259, Mlig455_035645	Neo: Germline Age: - Region-enriched R5: 5.246/0.00002	MCTP2	0.951	-	-	-	-	-	0.951	Mlig455_029259 {REF} {Length: 2928} {Pfam: C2 domain [PF00168.32, score=98.4]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=29.1]} {Human: ENSG00000140563, MCTP2, multiple C2 and transmembrane domain containing 2, [Score=256, Expect=7e-74]} {Mouse: ENSMUSG00000032776, Mctp2, multiple C2 domains, transmembrane 2, [Score=240, Expect=3e-68]; ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [Score=231, Expect=1e-64]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [Score=193, Expect=1e-51]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [Score=188, Expect=1e-50]} {Smed: dd_Smed_v6_13224_0_1, dd_Smed_v6_13224_0_1, [Score=52.8, Expect=6e-07]} {RNA1509_39731} {RNA1310_12030} {RNA815_47476} Mlig455_035645 {REF} {Length: 2621} {Pfam: C2 domain [PF00168.32, score=98.4]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=29.1]} {Human: ENSG00000140563, MCTP2, multiple C2 and transmembrane domain containing 2, [Score=256, Expect=7e-74]} {Mouse: ENSMUSG00000032776, Mctp2, multiple C2 domains, transmembrane 2, [Score=240, Expect=3e-68]; ENSMUSG00000021596, Mctp1, multiple C2 domains, transmembrane 1, [Score=231, Expect=1e-64]} {Dmel: FBgn0034389, Mctp, Multiple C2 domain and transmembrane region protein, [Score=193, Expect=1e-51]} {Celegans: WBGene00017063, mctp-1, Multiple C2 and Transmembrane region Protein family homolog, [Score=188, Expect=1e-50]} {Smed: dd_Smed_v6_13224_0_1, dd_Smed_v6_13224_0_1, [Score=52.8, Expect=6e-07]} {RNA1509_39731} {RNA1310_12030} {RNA815_50848}
23.	MligTC455_31684	15	0.3	Mlig455_005479, Mlig455_007326, Mlig455_008219, Mlig455_020543, Mlig455_027651, Mlig455_036687, Mlig455_043072, Mlig455_055393	Neo: - Age: logFC(26M/2M)=-0.726		0.951	-	-	-	-	-	0.951	Mlig455_005479 {REF} {Length: 1483} {TRANSSPLICED} {Dmel: FBgn0038242, CG14852, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=63.2, Expect=3e-10]} {RNA1509_9393} {RNA1310_740.1} {RNA815_41450} Mlig455_007326 {REF} {Length: 1483} {TRANSSPLICED} {Dmel: FBgn0038242, CG14852, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=63.2, Expect=3e-10]} {RNA1509_9393} {RNA1310_740.1} {RNA815_41450} Mlig455_008219 {REF} {Length: 1480} {TRANSSPLICED} {Dmel: FBgn0038242, CG14852, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=63.2, Expect=3e-10]} {RNA1509_9393} {RNA1310_740.1} {RNA815_41450} Mlig455_020543 {REF} {Length: 1544} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=71.2, Expect=3e-13]} {RNA1509_41793} {RNA1310_8110} {RNA815_38821} Mlig455_027651 {REF} {Length: 1505} {Pfam: WSC domain [PF01822.21, score=50.0]} {RNA1509_53783} {RNA1310_34968.1} {RNA815_24434} Mlig455_036687 {REF} {Length: 3290} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=71.7]; Integrase zinc binding domain [PF17921.3, score=50.9]; Integrase core domain [PF00665.28, score=50.8]; PIF1-like helicase [PF05970.16, score=33.5]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.0, Expect=6e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=148, Expect=3e-36]} {RNA1509_9393} {RNA1310_4313.1} {RNA815_29579} Mlig455_043072 {REF} {Length: 2803} {Dmel: FBgn0038242, CG14852, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=63.2, Expect=3e-10]} {RNA1509_9393} {RNA1310_740.1} {RNA815_41450} Mlig455_055393 {REF} {Length: 1483} {TRANSSPLICED} {Dmel: FBgn0038242, CG14852, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=63.2, Expect=3e-10]} {RNA1509_9393} {RNA1310_740.1} {RNA815_41450}