Data search
Results for MligTC455_03123
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_03123 | 10 | 0.20 | Mlig455_050999 | Neo: - Age: - |
Mlig455_050999 {REF} {Length: 1918} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.3]} {RNA1509_38551} {RNA1310_78913} {RNA815_14106} |
Cumulative graph for MligTC455_03123
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.875 | 0.654 | 0.99994 | 1.00000 | |
| RegionR2 | 3.137 | 0.654 | 0.99994 | 1.00000 | |
| RegionR3 | 0.589 | 0.654 | 0.99994 | 1.00000 | |
| RegionR4 | -3.17 | 0.654 | 0.99982 | 1.00000 | |
| RegionR5 | -0.769 | 0.654 | 0.99990 | 1.00000 | |
| RegionR6 | -0.009 | 0.654 | 0.99994 | 1.00000 | |
| RegionR7 | 1.291 | 0.654 | 0.99998 | 1.00000 | |
| RegionR8 | 1.805 | 0.654 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.572 | 0.654 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.305 | 0.654 | 0.99983 | 1.00000 | |
| RegenerationR3 | 2.453 | 0.654 | 1.00000 | 1.00000 | |
| RegenerationR4 | 2.959 | 0.654 | 0.99959 | 1.00000 | |
| RegenerationR5 | 0.094 | 0.654 | 0.99968 | 1.00000 | |
| RegenerationR6 | 2.124 | 0.654 | 0.99954 | 1.00000 | |
| RegenerationBL | -2.018 | 0.654 | 0.99993 | 1.00000 | |
| RegenerationTP | -1.551 | 0.654 | 0.99994 | 1.00000 |
Genes with expression patterns similar to MligTC455_03123
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_03123 | 10 | 0.2 | Mlig455_050999 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_050999 {REF} {Length: 1918} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.3]} {RNA1509_38551} {RNA1310_78913} {RNA815_14106} | |
| 2. | MligTC455_13279 | 21 | 0.43 | Mlig455_026239, Mlig455_042502 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_026239 {REF} {Length: 4375} {TRANSSPLICED} {RNA1509_41153} {RNA1310_8586} {RNA815_7730.1} Mlig455_042502 {REF} {Length: 4217} {TRANSSPLICED} {RNA1509_41153} {RNA1310_8586} {RNA815_7730.1} |
|
| 3. | MligTC455_07928 | 55 | 1.15 | Mlig455_026232 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_026232 {REF} {Length: 989} {NoTransDecoderORF} {RNA1509_48037} {RNA1310_118369} {RNA815_64342} | |
| 4. | MligTC455_50809 | 15 | 0.31 | Mlig455_011339 | Neo: - Age: - |
GNAO1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_011339 {REF} {Length: 3019} {Pfam: G-protein alpha subunit [PF00503.22, score=221.6]; ADP-ribosylation factor family [PF00025.23, score=28.0]; FtsK/SpoIIIE family [PF01580.20, score=18.7]} {Human: ENSG00000087258, GNAO1, G protein subunit alpha o1, [Score=126, Expect=2e-31]; ENSG00000134183, GNAT2, G protein subunit alpha transducin 2, [Score=125, Expect=4e-31]; ENSG00000060558, GNA15, G protein subunit alpha 15, [Score=124, Expect=2e-30]; ENSG00000114349, GNAT1, G protein subunit alpha transducin 1, [Score=120, Expect=2e-29]} {Mouse: ENSMUSG00000009108, Gnat2, guanine nucleotide binding protein, alpha transducing 2, [Score=126, Expect=1e-31]; ENSMUSG00000031748, Gnao1, guanine nucleotide binding protein, alpha O, [Score=126, Expect=1e-31]; ENSMUSG00000028777, Gnat3, guanine nucleotide binding protein, alpha transducing 3, [Score=125, Expect=3e-31]; ENSMUSG00000034837, Gnat1, guanine nucleotide binding protein, alpha transducing 1, [Score=122, Expect=5e-30]; ENSMUSG00000032562, Gnai2, guanine nucleotide binding protein (G protein), alpha inhibiting 2, [Score=121, Expect=8e-30]} {Dmel: FBgn0001122, Galphao, G protein alpha o subunit, [Score=130, Expect=3e-33]} {Celegans: WBGene00001664, gpa-2, Guanine nucleotide-binding protein alpha-2 subunit, [Score=145, Expect=2e-38]} {Smed: dd_Smed_v6_22522_0_1, dd_Smed_v6_22522_0_1, [RH, Score=224, Expect=1e-67]} {RNA1509_54949} {RNA1310_57762} {RNA815_30202} |
Berezikov Lab - 2020-2021 © ERIBA