TomoSeq data search

Data search

Results for MligTC455_03178

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_03178	18	0.38	Mlig455_017060	Neo: - Age: - Regeneration-upregulated R4: 6.573 Regeneration-enriched R4: 6.573		Mlig455_017060 {REF} {Length: 1498} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=25.6]; RNase H [PF00075.26, score=19.2]} {RNA1310_20747.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_03178

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.02	0.839	0.99967	1.00000
RegionR2	4.303	0.839	0.99987	1.00000
RegionR3	-0.128	0.839	0.99996	1.00000
RegionR4	-3.992	0.839	0.99974	1.00000
RegionR5	-1.751	0.839	0.99978	1.00000
RegionR6	-0.026	0.839	0.99992	1.00000
RegionR7	2.091	0.839	0.99992	1.00000
RegionR8	2.523	0.839	0.99993	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.777	0.839	0.99991	1.00000
RegenerationR2	4.25	0.839	0.00050	0.03029
RegenerationR3	6.613	0.839	0.00020	0.01836
RegenerationR4	6.573	0.839	0.00016	0.00969	Specific for R4: 6.573
RegenerationR5	4.518	0.839	0.00092	0.05038
RegenerationR6	3.846	0.839	0.01312	0.14128
RegenerationBL	4.373	0.839	0.00664	0.07898
RegenerationTP	3.993	0.839	0.02243	0.25496

Genes with expression patterns similar to MligTC455_03178

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_03178	18	0.38	Mlig455_017060	Neo: - Age: - Regeneration-upregulated R4: 6.573 Regeneration-enriched R4: 6.573		2	-	-	-	-	1.000	1.000	Mlig455_017060 {REF} {Length: 1498} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=25.6]; RNase H [PF00075.26, score=19.2]} {RNA1310_20747.2}
2.	MligTC455_49534	136	2.82	Mlig455_051384	Neo: - Age: -	MOV10L1	0.96	-	-	-	-	0.960	-	Mlig455_051384 {REF} {Length: 5083} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=126.9]; AAA domain [PF13086.8, score=110.4]; AAA domain [PF13604.8, score=53.4]; AAA domain [PF13245.8, score=36.0]; Type III restriction enzyme, res subunit [PF04851.17, score=25.3]; AAA domain [PF13401.8, score=19.1]; UvrD/REP helicase N-terminal domain [PF00580.23, score=18.6]} {Human: ENSG00000073146, MOV10L1, Mov10 like RISC complex RNA helicase 1, [RH, Score=443, Expect=1e-135]} {Mouse: ENSMUSG00000015365, Mov10l1, Moloney leukemia virus 10-like 1, [RH, Score=436, Expect=2e-133]; ENSMUSG00000002227, Mov10, Moloney leukemia virus 10, [RH, Score=417, Expect=5e-128]} {Dmel: FBgn0041164, armi, armitage, [RH, Score=418, Expect=4e-127]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [Score=164, Expect=4e-41]} {Smed: dd_Smed_v6_2121_1_1, dd_Smed_v6_2121_1_1, [RH, Score=583, Expect=0.0]} {RNA1509_13793, RNA1509_55979} {RNA1310_3451.1, RNA1509_13793, RNA1509_55979} {RNA1509_13793, RNA1509_55979, RNA815_11722}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_03178

0.38

Mlig455_017060

Neo: -

Age: -

Regeneration-upregulated R4: 6.573

Regeneration-enriched R4: 6.573

1.000

Mlig455_017060 {REF} {Length: 1498} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=25.6]; RNase H [PF00075.26, score=19.2]} {RNA1310_20747.2}

MligTC455_49534

136

2.82

Mlig455_051384

Neo: -

Age: -

MOV10L1

0.96

0.960

Mlig455_051384 {REF} {Length: 5083} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=126.9]; AAA domain [PF13086.8, score=110.4]; AAA domain [PF13604.8, score=53.4]; AAA domain [PF13245.8, score=36.0]; Type III restriction enzyme, res subunit [PF04851.17, score=25.3]; AAA domain [PF13401.8, score=19.1]; UvrD/REP helicase N-terminal domain [PF00580.23, score=18.6]} {Human: ENSG00000073146, MOV10L1, Mov10 like RISC complex RNA helicase 1, [RH, Score=443, Expect=1e-135]} {Mouse: ENSMUSG00000015365, Mov10l1, Moloney leukemia virus 10-like 1, [RH, Score=436, Expect=2e-133]; ENSMUSG00000002227, Mov10, Moloney leukemia virus 10, [RH, Score=417, Expect=5e-128]} {Dmel: FBgn0041164, armi, armitage, [RH, Score=418, Expect=4e-127]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [Score=164, Expect=4e-41]} {Smed: dd_Smed_v6_2121_1_1, dd_Smed_v6_2121_1_1, [RH, Score=583, Expect=0.0]} {RNA1509_13793, RNA1509_55979} {RNA1310_3451.1, RNA1509_13793, RNA1509_55979} {RNA1509_13793, RNA1509_55979, RNA815_11722}