TomoSeq data search

Data search

Results for MligTC455_03334

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_03334	36	0.74	Mlig455_061052	Neo: - Age: -		Mlig455_061052 {REF} {Length: 659} {Celegans: WBGene00016348, C33E10.6, [Score=58.9, Expect=4e-12]} {RNA1509_8360} {RNA1310_8325.1} {RNA815_1671.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_03334

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.476	0.75	0.99994	1.00000
RegionR2	4.731	0.75	1.00000	1.00000
RegionR3	0.436	0.75	0.99983	1.00000
RegionR4	-2.684	0.75	0.99979	1.00000
RegionR5	-0.834	0.75	0.99976	1.00000
RegionR6	-0.052	0.75	0.99988	1.00000
RegionR7	0.558	0.75	1.00000	1.00000
RegionR8	0.322	0.75	0.99987	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.029	0.75	0.99989	1.00000
RegenerationR2	-1.744	0.75	0.01238	0.18163
RegenerationR3	0.854	0.75	0.99983	1.00000
RegenerationR4	1.533	0.75	0.99940	1.00000
RegenerationR5	0.577	0.75	1.00000	1.00000
RegenerationR6	0.467	0.75	1.00000	1.00000
RegenerationBL	0.854	0.75	0.99993	1.00000
RegenerationTP	1.486	0.75	1.00000	1.00000

Genes with expression patterns similar to MligTC455_03334

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_03334	36	0.74	Mlig455_061052	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_061052 {REF} {Length: 659} {Celegans: WBGene00016348, C33E10.6, [Score=58.9, Expect=4e-12]} {RNA1509_8360} {RNA1310_8325.1} {RNA815_1671.1}
2.	MligTC455_31903	292	6.08	Mlig455_064011, Mlig455_070707	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_064011 {REF} {Length: 5320} {Pfam: PAS domain [PF13188.9, score=21.4]} {RNA1509_35931} {RNA1310_11597.1} {RNA815_20842.1} Mlig455_070707 {REF} {Length: 3967} {Pfam: PAS domain [PF13188.9, score=21.2]; Lines N-terminus [PF14694.8, score=18.8]} {RNA1509_31473} {RNA1310_51110.1} {RNA815_20842.1}
3.	MligTC455_06340	199	4.16	Mlig455_048216	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_048216 {REF} {Length: 2252} {RNA1509_2718} {RNA1310_486.2} {RNA815_161}
4.	MligTC455_30991	997	20.78	Mlig455_018127	Neo: Germline Age: Up-Down-Down Region-specific R4: 4.938 Region-enriched R4: 3.387/0.00094	KLHL5	0.971	-	-	-	-	0.971	-	Mlig455_018127 {REF} {Length: 8448} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=113.8]; Kelch motif [PF13964.8, score=87.8]; Kelch motif [PF07646.17, score=71.4]; BTB And C-terminal Kelch [PF07707.17, score=60.0]; Galactose oxidase, central domain [PF13418.8, score=44.3]; Kelch motif [PF13854.8, score=42.8]; Galactose oxidase, central domain [PF13415.8, score=36.2]; BTB/POZ domain [PF00651.33, score=30.2]} {Human: ENSG00000109790, KLHL5, kelch like family member 5, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000054920, Klhl5, kelch-like 5, [Score=120, Expect=4e-28]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=129, Expect=1e-31]} {Celegans: WBGene00020952, kel-8, Kelch-like protein 8, [Score=62.4, Expect=5e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=97.1, Expect=5e-21]} {RNA1509_9219} {RNA1310_468, RNA1509_9219} {RNA1509_9219, RNA815_355.1}
5.	MligTC455_31865	130	2.71	Mlig455_007329	Neo: - Age: Up-Down-Down		0.97	-	-	-	-	0.970	-	Mlig455_007329 {REF} {Length: 3948} {Pfam: Chorion protein [PF01723.18, score=21.5]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7717.1}
6.	MligTC455_27995	229	4.77	Mlig455_000174, Mlig455_015369	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_000174 {REF} {Length: 4732} {Celegans: WBGene00016348, C33E10.6, [Score=152, Expect=2e-41]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=137, Expect=7e-37]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1} Mlig455_015369 {REF} {Length: 3981} {Celegans: WBGene00016348, C33E10.6, [Score=149, Expect=2e-40]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=135, Expect=4e-36]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
7.	MligTC455_27038	76	1.59	Mlig455_068920	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_068920 {REF} {Length: 7461} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_26043, RNA1509_32599, RNA1509_8795} {RNA1310_1659, RNA1509_26043, RNA1509_8795} {RNA1509_26043, RNA1509_8795, RNA815_252.1}
8.	MligTC455_49807	1833	38.18	Mlig455_070163	Neo: - Age: Down-Up-Up	RAC1	0.967	-	-	-	-	0.967	-	Mlig455_070163 {REF} {Length: 1370} {Pfam: Ras family [PF00071.24, score=145.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=46.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.8]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=139, Expect=3e-41]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=136, Expect=5e-40]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=136, Expect=4e-40]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000070831, CDC42, cell division cycle 42, [Score=134, Expect=2e-39]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=134, Expect=2e-39]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=139, Expect=2e-41]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=137, Expect=7e-41]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=136, Expect=2e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=136, Expect=4e-40]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=135, Expect=2e-40]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=144, Expect=1e-43]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=137, Expect=4e-41]} {RNA1509_14417} {RNA1310_34688.1} {RNA815_20638}
9.	MligTC455_28229	46	0.95	Mlig455_013081	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_013081 {REF} {Length: 530} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_39121}
10.	MligTC455_37213	82	1.71	Mlig455_035489	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_035489 {REF} {Length: 3502} {RNA1509_42371} {RNA1310_12088.1} {RNA815_3483}
11.	MligTC455_42312	980	20.41	Mlig455_062927	Neo: Germline Age: - Region-specific R4: 2.105 Regeneration-downregulated R4: -2.203 Regeneration-depleted R4: -2.203		0.964	-	-	-	-	0.964	-	Mlig455_062927 {REF} {Length: 1814} {RNA1509_22824, RNA1509_25833, RNA1509_32798} {RNA1310_12939, RNA1509_22824, RNA1509_25833, RNA1509_32798} {RNA1509_22824, RNA1509_25833, RNA1509_32798, RNA815_6650}
12.	MligTC455_37691	84	1.76	Mlig455_050364	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_050364 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
13.	MligTC455_31906	195	4.06	Mlig455_068976	Neo: - Age: Up-Up-Down		0.962	-	-	-	-	0.962	-	Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2}
14.	MligTC455_38832	316	6.58	Mlig455_052280	Neo: - Age: logFC(26M/2M)=-1.281		0.959	-	-	-	-	0.959	-	Mlig455_052280 {REF} {Length: 2424} {Pfam: PHD-finger [PF00628.31, score=39.2]} {RNA1509_44038} {RNA1310_30980} {RNA815_17109}
15.	MligTC455_28121	122	2.54	Mlig455_003280	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_003280 {REF} {Length: 2786} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
16.	MligTC455_53591	342	7.13	Mlig455_036264, Mlig455_055387, Mlig455_055461	Neo: - Age: -	CNP	0.953	-	-	-	-	0.953	-	Mlig455_036264 {REF} {Length: 506} {Pfam: 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) [PF05881.14, score=78.1]} {Human: ENSG00000173786, CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=73.9, Expect=2e-15]} {Mouse: ENSMUSG00000006782, Cnp, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=72.0, Expect=5e-15]} {RNA1310_49198} {RNA815_21325} Mlig455_055387 {REF} {Length: 2476} {Pfam: 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) [PF05881.14, score=78.0]} {Human: ENSG00000173786, CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=74.3, Expect=6e-16]} {Mouse: ENSMUSG00000006782, Cnp, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=72.8, Expect=2e-15]} {Smed: dd_Smed_v6_17770_0_1, dd_Smed_v6_17770_0_1, [Score=43.9, Expect=7e-06]} {RNA1509_38424} {RNA1310_20272} {RNA815_21325} Mlig455_055461 {REF} {Length: 2661} {TRANSSPLICED} {Pfam: 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) [PF05881.14, score=98.5]} {Human: ENSG00000173786, CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=90.5, Expect=9e-21]} {Mouse: ENSMUSG00000006782, Cnp, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=88.2, Expect=5e-20]} {Smed: dd_Smed_v6_17770_0_1, dd_Smed_v6_17770_0_1, [RH, Score=50.8, Expect=1e-07]} {RNA1509_38424} {RNA1310_9672.1} {RNA815_21325}
17.	MligTC455_41616	7880	164.17	Mlig455_049161, Mlig455_049214	Neo: - Age: logFC(26M/2M)=-0.222	FAM183A	0.952	-	-	-	-	0.952	-	Mlig455_049161 {REF} {Length: 826} {TRANSSPLICED} {Pfam: FAM183A and FAM183B related [PF14886.8, score=112.2]} {Human: ENSG00000186973, FAM183A, family with sequence similarity 183 member A, [RH, Score=81.6, Expect=3e-20]} {Mouse: ENSMUSG00000049154, Fam183b, family with sequence similarity 183, member B, [RH, Score=89.0, Expect=4e-23]} {Smed: dd_Smed_v6_8725_0_1, dd_Smed_v6_8725_0_1, [RH, Score=122, Expect=8e-37]} {RNA1509_11285} {RNA1310_43185} {RNA815_20139} Mlig455_049214 {REF} {Length: 858} {TRANSSPLICED} {Pfam: FAM183A and FAM183B related [PF14886.8, score=112.2]} {Human: ENSG00000186973, FAM183A, family with sequence similarity 183 member A, [RH, Score=81.6, Expect=3e-20]} {Mouse: ENSMUSG00000049154, Fam183b, family with sequence similarity 183, member B, [RH, Score=89.0, Expect=4e-23]} {Smed: dd_Smed_v6_8725_0_1, dd_Smed_v6_8725_0_1, [RH, Score=122, Expect=8e-37]} {RNA1509_11285, RNA1509_3441} {RNA1310_43185, RNA1509_11285, RNA1509_3441} {RNA1509_11285, RNA1509_3441, RNA815_20139}
18.	MligTC455_28445	61	1.26	Mlig455_041591	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_041591 {REF} {Length: 390} {NoTransDecoderORF} {RNA1509_26115} {RNA1310_50055} {RNA815_26110}
19.	MligTC455_32381	48	1	Mlig455_045018	Neo: - Age: Up-Down-Down Regeneration-upregulated R4: 5.564 Regeneration-enriched R4: 5.564		0.951	-	-	-	-	0.951	-	Mlig455_045018 {REF} {Length: 1041} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1}
20.	MligTC455_20922	2715	56.57	Mlig455_003844	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.461	SIRT6	0.95	-	-	-	-	0.950	-	Mlig455_003844 {REF} {Length: 1874} {Pfam: Sir2 family [PF02146.19, score=104.5]} {Human: ENSG00000077463, SIRT6, sirtuin 6, [Score=216, Expect=1e-66]} {Mouse: ENSMUSG00000034748, Sirt6, sirtuin 6, [Score=211, Expect=6e-65]} {Dmel: FBgn0037802, Sirt6, Sirtuin 6, [Score=211, Expect=3e-65]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_10564_0_1, dd_Smed_v6_10564_0_1, [Score=216, Expect=2e-67]} {RNA1509_7443} {RNA1310_6401, RNA1509_7443} {RNA1509_7443, RNA815_9812}
21.	MligTC455_26260	281	5.86	Mlig455_033712	Neo: - Age: Up-Down-Down		0.95	-	-	-	-	0.950	-	Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1}