TomoSeq data search

Data search

Results for MligTC455_03495

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_03495	10	0.20	Mlig455_022519	Neo: - Age: -	TRIM71	Mlig455_022519 {REF} {Length: 2216} {Pfam: NHL repeat [PF01436.23, score=49.1]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.1]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=94.0, Expect=3e-19]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=92.0, Expect=1e-18]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=95.9, Expect=6e-20]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=92.8, Expect=5e-19]} {Dmel: FBgn0010300, brat, brain tumor, [Score=79.3, Expect=8e-15]} {Celegans: WBGene00015646, mlt-10, [Score=173, Expect=1e-45]} {RNA1310_115931}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_03495

0.20

Mlig455_022519

Neo: -

Age: -

TRIM71

Mlig455_022519 {REF} {Length: 2216} {Pfam: NHL repeat [PF01436.23, score=49.1]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.1]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=94.0, Expect=3e-19]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=92.0, Expect=1e-18]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=95.9, Expect=6e-20]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=92.8, Expect=5e-19]} {Dmel: FBgn0010300, brat, brain tumor, [Score=79.3, Expect=8e-15]} {Celegans: WBGene00015646, mlt-10, [Score=173, Expect=1e-45]} {RNA1310_115931}

Cumulative graph for MligTC455_03495

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_03495

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_03495	10	0.2	Mlig455_022519	Neo: - Age: -	TRIM71	1	-	-	-	-	1.000	-	Mlig455_022519 {REF} {Length: 2216} {Pfam: NHL repeat [PF01436.23, score=49.1]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.1]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=94.0, Expect=3e-19]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=92.0, Expect=1e-18]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=95.9, Expect=6e-20]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=92.8, Expect=5e-19]} {Dmel: FBgn0010300, brat, brain tumor, [Score=79.3, Expect=8e-15]} {Celegans: WBGene00015646, mlt-10, [Score=173, Expect=1e-45]} {RNA1310_115931}
2.	MligTC455_14792	105	2.2	Mlig455_047705	Neo: Irradiation Age: - Region-specific R4: 6.591	TMEM30A	0.972	-	-	-	-	0.972	-	Mlig455_047705 {REF} {Length: 2656} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=78.5]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000022753, Tmem30c, transmembrane protein 30C, [Score=65.5, Expect=1e-11]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=63.5, Expect=6e-11]} {Dmel: FBgn0030752, CG9947, [Score=72.4, Expect=5e-14]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=68.9, Expect=6e-13]} {Smed: dd_Smed_v6_22194_0_1, dd_Smed_v6_22194_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_17463} {RNA1310_10723} {RNA815_9781}
3.	MligTC455_00239	15	0.3	Mlig455_063609	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_063609 {REF} {Length: 491}
4.	MligTC455_14791	116	2.41	Mlig455_014400	Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.458 Region-specific R4: 6.782 Region-enriched R4: 3.738/0.01843	TMEM30A	0.962	-	-	-	-	0.962	-	Mlig455_014400 {REF} {Length: 3042} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=179.8]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=127, Expect=1e-32]} {Dmel: FBgn0030752, CG9947, [Score=134, Expect=2e-35]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=122, Expect=5e-31]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=129, Expect=9e-34]} {RNA1509_17463, RNA1509_52829} {RNA1310_10723, RNA1509_17463, RNA1509_52829} {RNA1509_17463, RNA1509_52829, RNA815_9781}
5.	MligTC455_36993	179	3.73	Mlig455_050357	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_050357 {REF} {Length: 746} {NoTransDecoderORF} {RNA1509_7232} {RNA1310_60666} {RNA815_25142}