Data search


search
Exact
Search

Results for MligTC455_03513

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_03513 18 0.37 Mlig455_034856

Neo: -

Age: -

Mlig455_034856 {REF} {Length: 1651} {Pfam: Immunoglobulin domain [PF13927.8, score=36.1]; Immunoglobulin I-set domain [PF07679.18, score=35.5]; Immunoglobulin domain [PF00047.27, score=24.0]} {Smed: dd_Smed_v6_21969_0_1, dd_Smed_v6_21969_0_1, [Score=47.0, Expect=9e-06]} {RNA1509_24484} {RNA1310_21045} {RNA815_9338.1}

Cumulative graph for MligTC455_03513

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.041 0.727 0.99982 1.00000
RegionR2 2.576 0.727 0.99989 1.00000
RegionR3 -0.432 0.727 0.99995 1.00000
RegionR4 -2.307 0.727 0.99976 1.00000
RegionR5 -1.484 0.727 0.99979 1.00000
RegionR6 -0.289 0.727 0.99994 1.00000
RegionR7 1.438 0.727 0.99992 1.00000
RegionR8 1.539 0.727 0.99993 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.576 0.727 0.99992 1.00000
RegenerationR2 4.082 0.727 0.00211 0.06981
RegenerationR3 5.049 0.727 0.00482 0.12457
RegenerationR4 4.376 0.727 0.00476 0.09662
RegenerationR5 3.275 0.727 0.01298 0.20002
RegenerationR6 1.422 0.727 0.99988 1.00000
RegenerationBL 0.417 0.727 0.99994 1.00000
RegenerationTP 5.497 0.727 0.00671 0.13805


Genes with expression patterns similar to MligTC455_03513

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_03513 18 0.37 Mlig455_034856

Neo: -

Age: -

2 - - - - 1.000 1.000 Mlig455_034856 {REF} {Length: 1651} {Pfam: Immunoglobulin domain [PF13927.8, score=36.1]; Immunoglobulin I-set domain [PF07679.18, score=35.5]; Immunoglobulin domain [PF00047.27, score=24.0]} {Smed: dd_Smed_v6_21969_0_1, dd_Smed_v6_21969_0_1, [Score=47.0, Expect=9e-06]} {RNA1509_24484} {RNA1310_21045} {RNA815_9338.1}
2. MligTC455_13917 50 1.05 Mlig455_006935, Mlig455_017950

Neo: -

Age: -

0.991 - - - - - 0.991

Mlig455_006935 {REF} {Length: 1553} {RNA1310_24840} {RNA815_41829}

Mlig455_017950 {REF} {Length: 1661} {RNA1310_24840} {RNA815_41829}
3. MligTC455_27763 38 0.79 Mlig455_027014, Mlig455_027077

Neo: -

Age: -

ASIC1 0.965 - - - - - 0.965

Mlig455_027014 {REF} {Length: 2765} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=153.0]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=65.1, Expect=1e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=94.0, Expect=6e-20]} {RNA1310_11972} {RNA815_48193}

Mlig455_027077 {REF} {Length: 3006} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=211.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=59.7, Expect=1e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=58.2, Expect=4e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=59.3, Expect=1e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=56.6, Expect=8e-08]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=65.1, Expect=1e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=115, Expect=2e-26]} {RNA1310_11972} {RNA815_48193}
4. MligTC455_18569 79 1.65 Mlig455_002173, Mlig455_002274, Mlig455_002318

Neo: -

Age: -

Region-enriched R4: 6.510/0.00058

0.964 - - - - - 0.964

Mlig455_002173 {REF} {Length: 1129} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

Mlig455_002274 {REF} {Length: 1130} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

Mlig455_002318 {REF} {Length: 1012} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}
5. MligTC455_56513 8 0.16 Mlig455_010760

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_010760 {REF} {Length: 154} {NoTransDecoderORF}
6. MligTC455_51066 526 10.97 Mlig455_044665, Mlig455_044724

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.381/0.00000

0.956 - - - - - 0.956

Mlig455_044665 {REF} {Length: 1268} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}

Mlig455_044724 {REF} {Length: 1327} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}
7. MligTC455_42887 60 1.24 Mlig455_036468, Mlig455_056252

Neo: -

Age: -

CCKAR 0.954 - - - - - 0.954

Mlig455_036468 {REF} {Length: 2390} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=81.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=37.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.5]} {Human: ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=53.5, Expect=5e-07]; ENSG00000170425, ADORA2B, adenosine A2b receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=59.3, Expect=4e-09]} {Dmel: FBgn0264002, MsR2, Myosuppressin receptor 2, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [Score=69.7, Expect=9e-13]} {RNA1310_37299} {RNA815_29990}

Mlig455_056252 {REF} {Length: 2265} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.8]} {RNA1310_56612} {RNA815_44133}
8. MligTC455_32023 58 1.21 Mlig455_042769

Neo: -

Age: Up-Down-Up

0.953 - - - - - 0.953 Mlig455_042769 {REF} {Length: 5869} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1}
9. MligTC455_19438 27 0.56 Mlig455_016816

Neo: -

Age: -

RXRA 0.952 - - - - - 0.952 Mlig455_016816 {REF} {Length: 1783} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=72.3]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=23.6]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=82.0, Expect=2e-16]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=80.9, Expect=3e-16]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=79.3, Expect=1e-15]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=77.4, Expect=5e-15]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=75.5, Expect=2e-14]} {Celegans: WBGene00003651, nhr-61, Nuclear hormone receptor family member nhr-61, [Score=86.7, Expect=2e-18]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=79.0, Expect=1e-15]} {RNA1310_147040}
10. MligTC455_36963 39 0.81 Mlig455_050201

Neo: -

Age: Up-Down-Down

AVPR1B 0.952 - - - - - 0.952 Mlig455_050201 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=152.5]; Olfactory receptor [PF13853.8, score=29.2]} {Human: ENSG00000198049, AVPR1B, arginine vasopressin receptor 1B, [Score=92.8, Expect=1e-19]} {Mouse: ENSMUSG00000049112, Oxtr, oxytocin receptor, [Score=94.0, Expect=3e-20]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=80.5, Expect=7e-16]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=79.0, Expect=3e-15]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [Score=69.7, Expect=8e-13]} {RNA1310_72444} {RNA815_35126}
11. MligTC455_03020 77 1.61 Mlig455_031009

Neo: -

Age: -

PCDH7 0.95 - - - - - 0.950 Mlig455_031009 {REF} {Length: 4201} {Pfam: Cadherin domain [PF00028.19, score=251.4]} {Human: ENSG00000169851, PCDH7, protocadherin 7, [Score=236, Expect=2e-63]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=263, Expect=2e-72]} {Dmel: FBgn0284247, ds, dachsous, [Score=207, Expect=1e-53]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=172, Expect=3e-43]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=290, Expect=8e-83]} {RNA1509_5672} {RNA1310_47266} {RNA815_2173}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA