Data search
Results for MligTC455_03565
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_03565 | 49 | 1.02 | Mlig455_064367 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.179 |
POLR2B | Mlig455_064367 {REF} {Length: 4818} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1, RNA1509_1580} {RNA1509_1580, RNA815_603} |
Cumulative graph for MligTC455_03565
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 12.403 | 1.205 | 0.00518 | 0.22622 | |
| RegionR2 | -0.403 | 1.205 | 0.99981 | 1.00000 | |
| RegionR3 | -3.94 | 1.205 | 0.99991 | 1.00000 | |
| RegionR4 | 5.452 | 1.205 | 0.99964 | 1.00000 | |
| RegionR5 | -1.182 | 1.205 | 0.99990 | 1.00000 | |
| RegionR6 | -2.196 | 1.205 | 0.99990 | 1.00000 | |
| RegionR7 | -5.298 | 1.205 | 0.99988 | 1.00000 | |
| RegionR8 | -4.837 | 1.205 | 0.99989 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.602 | 1.205 | 0.99984 | 1.00000 | |
| RegenerationR2 | 3.408 | 1.205 | 0.00041 | 0.02778 | |
| RegenerationR3 | 6.405 | 1.205 | 0.99954 | 1.00000 | |
| RegenerationR4 | 1.92 | 1.205 | 0.99974 | 1.00000 | |
| RegenerationR5 | 5.522 | 1.205 | 0.99968 | 1.00000 | |
| RegenerationR6 | 3.426 | 1.205 | 0.99995 | 1.00000 | |
| RegenerationBL | 8.087 | 1.205 | 0.99994 | 1.00000 | |
| RegenerationTP | 5.949 | 1.205 | 0.99970 | 1.00000 |
Genes with expression patterns similar to MligTC455_03565
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_03565 | 49 | 1.02 | Mlig455_064367 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.179 |
POLR2B | 2 | 1.000 | - | - | - | - | 1.000 | Mlig455_064367 {REF} {Length: 4818} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1, RNA1509_1580} {RNA1509_1580, RNA815_603} |
| 2. | MligTC455_26263 | 70 | 1.45 | Mlig455_040654 | Neo: - Age: Up-Down-Down |
NR1I3 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_040654 {REF} {Length: 4785} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=99.8, Expect=3e-22]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=99.4, Expect=1e-21]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=7e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=2e-25]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=183, Expect=2e-50]} {RNA1509_15212} {RNA1310_18440} {RNA815_11206} |
| 3. | MligTC455_40459 | 62 | 1.3 | Mlig455_053585 | Neo: - Age: Up-Down-Down |
NR2C2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_053585 {REF} {Length: 5009} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=47.4]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=213, Expect=4e-59]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [RH, Score=214, Expect=2e-59]} {Dmel: FBgn0015239, Hr78, Hormone-receptor-like in 78, [RH, Score=140, Expect=3e-34]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [RH, Score=144, Expect=1e-35]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [RH, Score=126, Expect=1e-30]} {RNA1509_43216} {RNA1310_5171.1} {RNA815_17828} |
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