Data search
Results for MligTC455_04077
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04077 | 291 | 6.06 | Mlig455_051691 | Neo: - Age: Up-Up-Down |
SHOC2 | Mlig455_051691 {REF} {Length: 3953} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=207.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=131.7]; Leucine-rich repeat [PF14580.8, score=35.9]; Leucine Rich Repeat [PF00560.35, score=35.3]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.6]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=402, Expect=2e-132]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=405, Expect=7e-134]} {Dmel: FBgn0038504, Sur-8, [Score=418, Expect=5e-138]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=392, Expect=4e-129]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=380, Expect=2e-124]} {RNA1509_19249} {RNA1310_7161.1, RNA1509_19249} {RNA1509_19249, RNA815_11484} |
Cumulative graph for MligTC455_04077
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.011 | 3.123 | 0.99438 | 1.00000 | |
| RegionR2 | 0.059 | 3.123 | 0.92873 | 1.00000 | |
| RegionR3 | 0.11 | 3.123 | 0.82761 | 1.00000 | |
| RegionR4 | 0.706 | 3.123 | 0.26520 | 0.56978 | |
| RegionR5 | 0.195 | 3.123 | 0.68219 | 1.00000 | |
| RegionR6 | 0.184 | 3.123 | 0.72736 | 1.00000 | |
| RegionR7 | -0.152 | 3.123 | 0.83033 | 1.00000 | |
| RegionR8 | -1.114 | 3.123 | 0.26324 | 0.88540 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.871 | 3.123 | 0.25724 | 0.96756 | |
| RegenerationR2 | 0.462 | 3.123 | 0.34581 | 0.77923 | |
| RegenerationR3 | -0.48 | 3.123 | 0.40240 | 0.80426 | |
| RegenerationR4 | -0.47 | 3.123 | 0.44318 | 0.83866 | |
| RegenerationR5 | 0.118 | 3.123 | 0.82379 | 0.99556 | |
| RegenerationR6 | 0.37 | 3.123 | 0.51536 | 0.81709 | |
| RegenerationBL | -0.211 | 3.123 | 0.79647 | 1.00000 | |
| RegenerationTP | -0.082 | 3.123 | 0.92689 | 1.00000 |
Genes with expression patterns similar to MligTC455_04077
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04077 | 291 | 6.06 | Mlig455_051691 | Neo: - Age: Up-Up-Down |
SHOC2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051691 {REF} {Length: 3953} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=207.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=131.7]; Leucine-rich repeat [PF14580.8, score=35.9]; Leucine Rich Repeat [PF00560.35, score=35.3]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.6]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=402, Expect=2e-132]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=405, Expect=7e-134]} {Dmel: FBgn0038504, Sur-8, [Score=418, Expect=5e-138]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=392, Expect=4e-129]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=380, Expect=2e-124]} {RNA1509_19249} {RNA1310_7161.1, RNA1509_19249} {RNA1509_19249, RNA815_11484} |
| 2. | MligTC455_28082 | 163 | 3.4 | Mlig455_045840 | Neo: - Age: - |
0.958 | - | - | 0.958 | - | - | - | Mlig455_045840 {REF} {Length: 2893} {TRANSSPLICED} {RNA1509_25935} {RNA1310_22189} {RNA815_10427} | |
| 3. | MligTC455_10035 | 177 | 3.7 | Mlig455_070770 | Neo: Irradiation |
0.957 | - | - | - | - | 0.957 | - | Mlig455_070770 {REF} {Length: 1452} {NoTransDecoderORF} {RNA1509_18811} {RNA1310_39704} {RNA815_51915} | |
| 4. | MligTC455_35673 | 285 | 5.94 | Mlig455_024928 | Neo: - Age: - Region-enriched R7: 3.355/0.00005 |
ANK1 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_024928 {REF} {Length: 6147} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=340.7]; Ankyrin repeats (many copies) [PF13637.8, score=263.2]; Ankyrin repeat [PF00023.32, score=251.5]; Ankyrin repeats (many copies) [PF13857.8, score=233.6]; Ankyrin repeat [PF13606.8, score=225.1]; Mab-21 protein [PF03281.16, score=27.2]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=280, Expect=6e-76]; ENSG00000145362, ANK2, ankyrin 2, [Score=273, Expect=8e-74]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=270, Expect=3e-74]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=266, Expect=1e-71]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=264, Expect=4e-71]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=265, Expect=3e-71]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=271, Expect=1e-73]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=275, Expect=2e-77]} {RNA1509_15887} {RNA1310_1901, RNA1509_15887} {RNA1509_15887, RNA815_4744} |
| 5. | MligTC455_22415 | 512 | 10.67 | Mlig455_008652, Mlig455_069418 | Neo: - Age: - |
RAB1A, RAB1B | 0.954 | - | - | - | - | - | 0.954 | Mlig455_008652 {REF} {Length: 6906} {Pfam: Ras family [PF00071.24, score=587.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=389.6]; ADP-ribosylation factor family [PF00025.23, score=200.9]; 50S ribosome-binding GTPase [PF01926.25, score=108.0]; RsgA GTPase [PF03193.18, score=66.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=63.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=52.7]; AAA domain [PF13401.8, score=51.9]; AAA ATPase domain [PF13191.8, score=51.0]; Bacterial TniB protein [PF05621.13, score=45.5]; NACHT domain [PF05729.14, score=44.6]; P-loop containing dynein motor region [PF12775.9, score=42.5]; P-loop containing region of AAA domain [PF13555.8, score=42.0]; MCM P-loop domain [PF00493.25, score=41.8]; ABC transporter [PF00005.29, score=40.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.2]; Caspase recruitment domain [PF00619.23, score=36.1]; AAA domain [PF13671.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=32.7]; Protein of unknown function (DUF815) [PF05673.15, score=30.6]; Septin [PF00735.20, score=30.3]; AAA domain [PF13479.8, score=30.1]; G-protein alpha subunit [PF00503.22, score=29.2]; RNA helicase [PF00910.24, score=28.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.1]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=21.9]; AAA domain [PF13173.8, score=20.0]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=19.8]; AAA domain [PF13238.8, score=19.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.6]; Family of unknown function (DUF5838) [PF19156.2, score=18.5]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=161, Expect=2e-44]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=160, Expect=4e-44]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=155, Expect=4e-42]; ENSG00000285641, AL358472.6, novel protein, [Score=155, Expect=4e-42]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=153, Expect=1e-41]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=162, Expect=6e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=160, Expect=3e-44]} {Dmel: FBgn0285937, Rab1, [Score=163, Expect=3e-45]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=160, Expect=1e-44]} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1310_2946, RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043, RNA815_567} Mlig455_069418 {REF} {Length: 6098} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.4]; ADP-ribosylation factor family [PF00025.23, score=63.8]; Caspase recruitment domain [PF00619.23, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.2]; Bacterial TniB protein [PF05621.13, score=18.7]} {Human: ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=155, Expect=2e-42]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=156, Expect=6e-43]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=154, Expect=2e-42]} {Dmel: FBgn0285937, Rab1, [Score=154, Expect=2e-42]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=148, Expect=1e-40]} {RNA1509_44043} {RNA1310_6196} {RNA815_567} |