TomoSeq data search

Data search

Results for MligTC455_04090

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04090	1733	36.11	Mlig455_052274, Mlig455_052364	Neo: - Age: -	SOX13	Mlig455_052274 {REF} {Length: 4218} {Pfam: HMG (high mobility group) box [PF00505.21, score=85.7]; HMG-box domain [PF09011.12, score=31.8]} {Human: ENSG00000143842, SOX13, SRY-box 13, [RH, Score=180, Expect=3e-48]; ENSG00000134532, SOX5, SRY-box 5, [RH, Score=178, Expect=6e-47]; ENSG00000110693, SOX6, SRY-box 6, [RH, Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000070643, Sox13, SRY (sex determining region Y)-box 13, [RH, Score=183, Expect=2e-49]; ENSMUSG00000041540, Sox5, SRY (sex determining region Y)-box 5, [RH, Score=178, Expect=6e-47]} {Dmel: FBgn0039938, Sox102F, [Score=192, Expect=4e-53]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [RH, Score=190, Expect=3e-53]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_31235} {RNA1310_7536} {RNA815_17034} Mlig455_052364 {REF} {Length: 4308} {Pfam: HMG (high mobility group) box [PF00505.21, score=85.6]; HMG-box domain [PF09011.12, score=31.8]} {Human: ENSG00000143842, SOX13, SRY-box 13, [RH, Score=180, Expect=3e-48]; ENSG00000134532, SOX5, SRY-box 5, [RH, Score=180, Expect=3e-48]; ENSG00000110693, SOX6, SRY-box 6, [RH, Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000070643, Sox13, SRY (sex determining region Y)-box 13, [RH, Score=182, Expect=5e-50]; ENSMUSG00000041540, Sox5, SRY (sex determining region Y)-box 5, [RH, Score=177, Expect=4e-47]} {Dmel: FBgn0039938, Sox102F, [Score=192, Expect=3e-53]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [RH, Score=190, Expect=9e-54]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_31235} {RNA1310_7536} {RNA815_17034}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04090

1733

36.11

Mlig455_052274, Mlig455_052364

Neo: -

Age: -

SOX13

Mlig455_052274 {REF} {Length: 4218} {Pfam: HMG (high mobility group) box [PF00505.21, score=85.7]; HMG-box domain [PF09011.12, score=31.8]} {Human: ENSG00000143842, SOX13, SRY-box 13, [RH, Score=180, Expect=3e-48]; ENSG00000134532, SOX5, SRY-box 5, [RH, Score=178, Expect=6e-47]; ENSG00000110693, SOX6, SRY-box 6, [RH, Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000070643, Sox13, SRY (sex determining region Y)-box 13, [RH, Score=183, Expect=2e-49]; ENSMUSG00000041540, Sox5, SRY (sex determining region Y)-box 5, [RH, Score=178, Expect=6e-47]} {Dmel: FBgn0039938, Sox102F, [Score=192, Expect=4e-53]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [RH, Score=190, Expect=3e-53]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_31235} {RNA1310_7536} {RNA815_17034}

Mlig455_052364 {REF} {Length: 4308} {Pfam: HMG (high mobility group) box [PF00505.21, score=85.6]; HMG-box domain [PF09011.12, score=31.8]} {Human: ENSG00000143842, SOX13, SRY-box 13, [RH, Score=180, Expect=3e-48]; ENSG00000134532, SOX5, SRY-box 5, [RH, Score=180, Expect=3e-48]; ENSG00000110693, SOX6, SRY-box 6, [RH, Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000070643, Sox13, SRY (sex determining region Y)-box 13, [RH, Score=182, Expect=5e-50]; ENSMUSG00000041540, Sox5, SRY (sex determining region Y)-box 5, [RH, Score=177, Expect=4e-47]} {Dmel: FBgn0039938, Sox102F, [Score=192, Expect=3e-53]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [RH, Score=190, Expect=9e-54]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_31235} {RNA1310_7536} {RNA815_17034}

Cumulative graph for MligTC455_04090

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.512	5.334	0.14047	0.74850
RegionR2	0.509	5.334	0.26328	0.64523
RegionR3	0.47	5.334	0.21713	0.75851
RegionR4	0.643	5.334	0.18388	0.45556
RegionR5	-0.25	5.334	0.52904	0.89161
RegionR6	0.217	5.334	0.58211	1.00000
RegionR7	0.086	5.334	0.84160	1.00000
RegionR8	-0.163	5.334	0.75163	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.096	5.334	0.53753	1.00000
RegenerationR2	-0.432	5.334	0.33037	0.76785
RegenerationR3	-0.679	5.334	0.14208	0.56828
RegenerationR4	-0.212	5.334	0.66558	0.94052
RegenerationR5	-0.036	5.334	0.93842	1.00000
RegenerationR6	-0.104	5.334	0.82193	0.98762
RegenerationBL	0.42	5.334	0.33761	0.70407
RegenerationTP	0.016	5.334	0.97504	1.00000

Genes with expression patterns similar to MligTC455_04090

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04090	1733	36.11	Mlig455_052274, Mlig455_052364	Neo: - Age: -	SOX13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052274 {REF} {Length: 4218} {Pfam: HMG (high mobility group) box [PF00505.21, score=85.7]; HMG-box domain [PF09011.12, score=31.8]} {Human: ENSG00000143842, SOX13, SRY-box 13, [RH, Score=180, Expect=3e-48]; ENSG00000134532, SOX5, SRY-box 5, [RH, Score=178, Expect=6e-47]; ENSG00000110693, SOX6, SRY-box 6, [RH, Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000070643, Sox13, SRY (sex determining region Y)-box 13, [RH, Score=183, Expect=2e-49]; ENSMUSG00000041540, Sox5, SRY (sex determining region Y)-box 5, [RH, Score=178, Expect=6e-47]} {Dmel: FBgn0039938, Sox102F, [Score=192, Expect=4e-53]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [RH, Score=190, Expect=3e-53]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_31235} {RNA1310_7536} {RNA815_17034} Mlig455_052364 {REF} {Length: 4308} {Pfam: HMG (high mobility group) box [PF00505.21, score=85.6]; HMG-box domain [PF09011.12, score=31.8]} {Human: ENSG00000143842, SOX13, SRY-box 13, [RH, Score=180, Expect=3e-48]; ENSG00000134532, SOX5, SRY-box 5, [RH, Score=180, Expect=3e-48]; ENSG00000110693, SOX6, SRY-box 6, [RH, Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000070643, Sox13, SRY (sex determining region Y)-box 13, [RH, Score=182, Expect=5e-50]; ENSMUSG00000041540, Sox5, SRY (sex determining region Y)-box 5, [RH, Score=177, Expect=4e-47]} {Dmel: FBgn0039938, Sox102F, [Score=192, Expect=3e-53]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [RH, Score=190, Expect=9e-54]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_31235} {RNA1310_7536} {RNA815_17034}
2.	MligTC455_44314	5483	114.23	Mlig455_064778	Neo: - Age: Down-Down-Up	MYL6B	0.951	-	-	-	-	-	0.951	Mlig455_064778 {REF} {Length: 1370} {Pfam: EF-hand domain [PF13405.8, score=39.0]; EF-hand domain pair [PF13499.8, score=33.1]; EF-hand domain pair [PF13833.8, score=33.1]; EF hand [PF00036.34, score=23.9]} {Human: ENSG00000196465, MYL6B, myosin light chain 6B, [Score=116, Expect=1e-31]; ENSG00000198336, MYL4, myosin light chain 4, [Score=111, Expect=9e-30]} {Mouse: ENSMUSG00000039824, Myl6b, myosin, light polypeptide 6B, [Score=117, Expect=5e-32]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=114, Expect=3e-31]} {Dmel: FBgn0002772, Mlc1, Myosin alkali light chain 1, [RH, Score=116, Expect=1e-32]} {Celegans: WBGene00003371, mlc-3, Myosin, essential light chain, [RH, Score=130, Expect=3e-38]} {Smed: dd_Smed_v6_223_0_1, dd_Smed_v6_223_0_1, [RH, Score=251, Expect=6e-86]} {RNA1509_2162, RNA1509_3915, RNA1509_50465} {RNA1310_33866, RNA1509_2162, RNA1509_3915, RNA1509_50465} {RNA1509_2162, RNA1509_3915, RNA1509_50465, RNA815_15285}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_04090

1733

36.11

Mlig455_052274, Mlig455_052364

Neo: -

Age: -

SOX13

1.000

MligTC455_44314

5483

114.23

Mlig455_064778

Neo: -

Age: Down-Down-Up

MYL6B

0.951

Mlig455_064778 {REF} {Length: 1370} {Pfam: EF-hand domain [PF13405.8, score=39.0]; EF-hand domain pair [PF13499.8, score=33.1]; EF-hand domain pair [PF13833.8, score=33.1]; EF hand [PF00036.34, score=23.9]} {Human: ENSG00000196465, MYL6B, myosin light chain 6B, [Score=116, Expect=1e-31]; ENSG00000198336, MYL4, myosin light chain 4, [Score=111, Expect=9e-30]} {Mouse: ENSMUSG00000039824, Myl6b, myosin, light polypeptide 6B, [Score=117, Expect=5e-32]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=114, Expect=3e-31]} {Dmel: FBgn0002772, Mlc1, Myosin alkali light chain 1, [RH, Score=116, Expect=1e-32]} {Celegans: WBGene00003371, mlc-3, Myosin, essential light chain, [RH, Score=130, Expect=3e-38]} {Smed: dd_Smed_v6_223_0_1, dd_Smed_v6_223_0_1, [RH, Score=251, Expect=6e-86]} {RNA1509_2162, RNA1509_3915, RNA1509_50465} {RNA1310_33866, RNA1509_2162, RNA1509_3915, RNA1509_50465} {RNA1509_2162, RNA1509_3915, RNA1509_50465, RNA815_15285}