Data search
Results for MligTC455_04128
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04128 | 2027 | 42.22 | Mlig455_065700 | Neo: - Age: - |
Mlig455_065700 {REF} {Length: 1680} {Smed: dd_Smed_v6_6705_0_1, dd_Smed_v6_6705_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_43183, RNA1509_8511} {RNA1310_3433, RNA1509_43183, RNA1509_8511} {RNA1509_43183, RNA1509_8511, RNA815_13598.1} |
Cumulative graph for MligTC455_04128
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.043 | 5.437 | 0.13227 | 0.73154 | |
| RegionR2 | -0.149 | 5.437 | 0.61471 | 0.96130 | |
| RegionR3 | 0.087 | 5.437 | 0.72631 | 1.00000 | |
| RegionR4 | 0.476 | 5.437 | 0.11478 | 0.33692 | |
| RegionR5 | 0.227 | 5.437 | 0.35000 | 0.69924 | |
| RegionR6 | 0.437 | 5.437 | 0.08316 | 0.53223 | |
| RegionR7 | 0.123 | 5.437 | 0.69812 | 1.00000 | |
| RegionR8 | -0.159 | 5.437 | 0.69277 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.027 | 5.437 | 0.97961 | 1.00000 | |
| RegenerationR2 | -0.003 | 5.437 | 0.99084 | 1.00000 | |
| RegenerationR3 | -0.029 | 5.437 | 0.91950 | 1.00000 | |
| RegenerationR4 | -0.084 | 5.437 | 0.77450 | 0.97842 | |
| RegenerationR5 | 0.029 | 5.437 | 0.91608 | 1.00000 | |
| RegenerationR6 | -0.232 | 5.437 | 0.41611 | 0.74861 | |
| RegenerationBL | 0.043 | 5.437 | 0.89086 | 1.00000 | |
| RegenerationTP | 0.542 | 5.437 | 0.10242 | 0.49699 |
Genes with expression patterns similar to MligTC455_04128
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04128 | 2027 | 42.22 | Mlig455_065700 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065700 {REF} {Length: 1680} {Smed: dd_Smed_v6_6705_0_1, dd_Smed_v6_6705_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_43183, RNA1509_8511} {RNA1310_3433, RNA1509_43183, RNA1509_8511} {RNA1509_43183, RNA1509_8511, RNA815_13598.1} | |
| 2. | MligTC455_04127 | 1950 | 40.61 | Mlig455_045556 | Neo: - Age: Down-Up-Down |
5.942 | 0.985 | 0.996 | 0.992 | 0.975 | 0.995 | 0.999 | Mlig455_045556 {REF} {Length: 1658} {Smed: dd_Smed_v6_6705_0_1, dd_Smed_v6_6705_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_43183} {RNA1310_3433} {RNA815_13598.1} | |
| 3. | MligTC455_43231 | 734 | 15.29 | Mlig455_034945 | Neo: - Age: - |
PAN3 | 0.981 | - | - | - | - | 0.981 | - | Mlig455_034945 {REF} {Length: 4166} {TRANSSPLICED} {Pfam: Pan3 Pseudokinase domain [PF18101.3, score=144.5]} {Human: ENSG00000152520, PAN3, poly(A) specific ribonuclease subunit PAN3, [Score=266, Expect=4e-79]} {Mouse: ENSMUSG00000029647, Pan3, PAN3 poly(A) specific ribonuclease subunit, [Score=267, Expect=2e-78]} {Dmel: FBgn0035397, CG11486, [Score=234, Expect=3e-67]} {Celegans: WBGene00014015, panl-3, PAB-dependent poly(A)-specific ribonuclease subunit PAN3, [Score=219, Expect=1e-62]} {Smed: dd_Smed_v6_4588_0_4, dd_Smed_v6_4588_0_4, [Score=301, Expect=1e-92]} {RNA1509_22307} {RNA1310_9893} {RNA815_9780} |
Berezikov Lab - 2020-2021 © ERIBA