TomoSeq data search

Data search

Results for MligTC455_04185

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04185	483	10.07	Mlig455_002353	Neo: - Age: - Region-enriched R6: 2.212/0.01405	SLIT2	Mlig455_002353 {REF} {Length: 2417} {Pfam: EGF-like domain [PF00008.29, score=134.3]; Human growth factor-like EGF [PF12661.9, score=87.7]; Laminin G domain [PF00054.25, score=62.9]; Laminin G domain [PF02210.26, score=59.4]; Leucine rich repeat [PF13855.8, score=46.5]; EGF-like domain [PF07974.15, score=37.6]; EGF domain [PF12947.9, score=29.8]; Calcium-binding EGF domain [PF07645.17, score=25.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.3]} {Human: ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=399, Expect=2e-122]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=388, Expect=1e-118]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=373, Expect=4e-113]} {Dmel: FBgn0264089, sli, slit, [Score=480, Expect=8e-153]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=413, Expect=2e-128]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=482, Expect=2e-153]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04185

483

10.07

Mlig455_002353

Neo: -

Age: -

Region-enriched R6: 2.212/0.01405

SLIT2

Mlig455_002353 {REF} {Length: 2417} {Pfam: EGF-like domain [PF00008.29, score=134.3]; Human growth factor-like EGF [PF12661.9, score=87.7]; Laminin G domain [PF00054.25, score=62.9]; Laminin G domain [PF02210.26, score=59.4]; Leucine rich repeat [PF13855.8, score=46.5]; EGF-like domain [PF07974.15, score=37.6]; EGF domain [PF12947.9, score=29.8]; Calcium-binding EGF domain [PF07645.17, score=25.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.3]} {Human: ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=399, Expect=2e-122]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=388, Expect=1e-118]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=373, Expect=4e-113]} {Dmel: FBgn0264089, sli, slit, [Score=480, Expect=8e-153]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=413, Expect=2e-128]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=482, Expect=2e-153]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}

Cumulative graph for MligTC455_04185

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.077	3.698	0.03591	0.46935
RegionR2	0.533	3.698	0.57330	0.93180
RegionR3	0.815	3.698	0.33653	0.87318
RegionR4	1.299	3.698	0.12027	0.34763
RegionR5	0.589	3.698	0.50380	0.86705
RegionR6	2.212	3.698	0.00023	0.01405
RegionR7	0.818	3.698	0.38803	1.00000
RegionR8	0.812	3.698	0.44313	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.257	3.698	1.00000	1.00000
RegenerationR2	-0.188	3.698	0.70324	0.95756
RegenerationR3	0.056	3.698	0.91699	1.00000
RegenerationR4	0.119	3.698	0.82918	0.99723
RegenerationR5	0.934	3.698	0.06539	0.40245
RegenerationR6	-0.656	3.698	0.19626	0.53605
RegenerationBL	-1.544	3.698	0.02735	0.18317
RegenerationTP	-0.151	3.698	0.82135	1.00000

Genes with expression patterns similar to MligTC455_04185

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04185	483	10.07	Mlig455_002353	Neo: - Age: - Region-enriched R6: 2.212/0.01405	SLIT2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002353 {REF} {Length: 2417} {Pfam: EGF-like domain [PF00008.29, score=134.3]; Human growth factor-like EGF [PF12661.9, score=87.7]; Laminin G domain [PF00054.25, score=62.9]; Laminin G domain [PF02210.26, score=59.4]; Leucine rich repeat [PF13855.8, score=46.5]; EGF-like domain [PF07974.15, score=37.6]; EGF domain [PF12947.9, score=29.8]; Calcium-binding EGF domain [PF07645.17, score=25.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.3]} {Human: ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=399, Expect=2e-122]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=388, Expect=1e-118]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=373, Expect=4e-113]} {Dmel: FBgn0264089, sli, slit, [Score=480, Expect=8e-153]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=413, Expect=2e-128]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=482, Expect=2e-153]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}
2.	MligTC455_43618	188	3.91	Mlig455_011416	Neo: - Age: - Region-enriched R5: 1.749/0.00887		0.96	-	-	-	0.960	-	-	Mlig455_011416 {REF} {Length: 2873} {TRANSSPLICED} {Pfam: Putative DNA-binding domain [PF04326.16, score=39.4]} {RNA1509_22438} {RNA1310_17975.1} {RNA815_7387.1}
3.	MligTC455_39409	684	14.26	Mlig455_066730, Mlig455_066744	Neo: - Age: logFC(26M/2M)=0.461	ANK2	0.951	-	-	-	0.951	-	-	Mlig455_066730 {REF} {Length: 6677} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=428.2]; Ankyrin repeats (3 copies) [PF12796.9, score=416.7]; Ankyrin repeats (many copies) [PF13857.8, score=272.9]; Ankyrin repeat [PF13606.8, score=250.8]; Ankyrin repeat [PF00023.32, score=209.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=162, Expect=2e-39]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=159, Expect=3e-38]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=158, Expect=2e-38]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=160, Expect=3e-39]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=159, Expect=2e-38]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=157, Expect=3e-38]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=168, Expect=1e-41]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=169, Expect=7e-42]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=181, Expect=1e-46]} {RNA1509_15876, RNA1509_25981, RNA1509_2870, RNA1509_59048} {RNA1310_604.1, RNA1509_25981, RNA1509_2870, RNA1509_59048} {RNA1509_25981, RNA1509_2870, RNA1509_59048, RNA815_475} Mlig455_066744 {REF} {Length: 6677} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=477.8]; Ankyrin repeats (3 copies) [PF12796.9, score=475.9]; Ankyrin repeats (many copies) [PF13857.8, score=301.9]; Ankyrin repeat [PF13606.8, score=287.5]; Ankyrin repeat [PF00023.32, score=236.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=163, Expect=7e-40]; ENSG00000151150, ANK3, ankyrin 3, [Score=162, Expect=2e-39]; ENSG00000029534, ANK1, ankyrin 1, [Score=160, Expect=1e-38]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=159, Expect=3e-38]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=157, Expect=5e-38]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=162, Expect=1e-39]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=162, Expect=1e-39]; ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=160, Expect=4e-39]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=160, Expect=1e-38]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=154, Expect=2e-37]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=169, Expect=9e-42]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=169, Expect=9e-42]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=181, Expect=3e-46]} {RNA1509_15876} {RNA1310_604.1, RNA1509_15876} {RNA1509_15876, RNA815_475}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_04185

483

10.07

Mlig455_002353

Neo: -

Age: -

Region-enriched R6: 2.212/0.01405

SLIT2

1.000

MligTC455_43618

188

3.91

Mlig455_011416

Neo: -

Age: -

Region-enriched R5: 1.749/0.00887

0.96

0.960

Mlig455_011416 {REF} {Length: 2873} {TRANSSPLICED} {Pfam: Putative DNA-binding domain [PF04326.16, score=39.4]} {RNA1509_22438} {RNA1310_17975.1} {RNA815_7387.1}

MligTC455_39409

684

14.26

Mlig455_066730, Mlig455_066744

Neo: -

Age: logFC(26M/2M)=0.461

ANK2

0.951

Mlig455_066730 {REF} {Length: 6677} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=428.2]; Ankyrin repeats (3 copies) [PF12796.9, score=416.7]; Ankyrin repeats (many copies) [PF13857.8, score=272.9]; Ankyrin repeat [PF13606.8, score=250.8]; Ankyrin repeat [PF00023.32, score=209.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=162, Expect=2e-39]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=159, Expect=3e-38]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=158, Expect=2e-38]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=160, Expect=3e-39]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=159, Expect=2e-38]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=157, Expect=3e-38]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=168, Expect=1e-41]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=169, Expect=7e-42]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=181, Expect=1e-46]} {RNA1509_15876, RNA1509_25981, RNA1509_2870, RNA1509_59048} {RNA1310_604.1, RNA1509_25981, RNA1509_2870, RNA1509_59048} {RNA1509_25981, RNA1509_2870, RNA1509_59048, RNA815_475}

Mlig455_066744 {REF} {Length: 6677} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=477.8]; Ankyrin repeats (3 copies) [PF12796.9, score=475.9]; Ankyrin repeats (many copies) [PF13857.8, score=301.9]; Ankyrin repeat [PF13606.8, score=287.5]; Ankyrin repeat [PF00023.32, score=236.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=163, Expect=7e-40]; ENSG00000151150, ANK3, ankyrin 3, [Score=162, Expect=2e-39]; ENSG00000029534, ANK1, ankyrin 1, [Score=160, Expect=1e-38]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=159, Expect=3e-38]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=157, Expect=5e-38]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=162, Expect=1e-39]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=162, Expect=1e-39]; ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=160, Expect=4e-39]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=160, Expect=1e-38]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=154, Expect=2e-37]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=169, Expect=9e-42]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=169, Expect=9e-42]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=181, Expect=3e-46]} {RNA1509_15876} {RNA1310_604.1, RNA1509_15876} {RNA1509_15876, RNA815_475}