TomoSeq data search

Data search

Results for MligTC455_04201

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04201	14	0.30	Mlig455_025994	Neo: - Age: Up-Down-Down	GRIK4	Mlig455_025994 {REF} {Length: 2119} {Pfam: Ligand-gated ion channel [PF00060.28, score=91.1]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=100, Expect=1e-22]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=101, Expect=3e-23]} {Dmel: FBgn0038837, CG3822, [Score=115, Expect=3e-28]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=94.0, Expect=6e-21]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=209, Expect=2e-65]} {RNA1310_51316}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04201

0.30

Mlig455_025994

Neo: -

Age: Up-Down-Down

GRIK4

Mlig455_025994 {REF} {Length: 2119} {Pfam: Ligand-gated ion channel [PF00060.28, score=91.1]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=100, Expect=1e-22]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=101, Expect=3e-23]} {Dmel: FBgn0038837, CG3822, [Score=115, Expect=3e-28]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=94.0, Expect=6e-21]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=209, Expect=2e-65]} {RNA1310_51316}

Cumulative graph for MligTC455_04201

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_04201

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04201	14	0.3	Mlig455_025994	Neo: - Age: Up-Down-Down	GRIK4	1	1.000	-	-	-	-	-	Mlig455_025994 {REF} {Length: 2119} {Pfam: Ligand-gated ion channel [PF00060.28, score=91.1]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=100, Expect=1e-22]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=101, Expect=3e-23]} {Dmel: FBgn0038837, CG3822, [Score=115, Expect=3e-28]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=94.0, Expect=6e-21]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=209, Expect=2e-65]} {RNA1310_51316}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts