TomoSeq data search

Data search

Results for MligTC455_04306

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04306	140	2.92	Mlig455_029650	Neo: - Age: Down-Down-Up		Mlig455_029650 {REF} {Length: 1377} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=19.0]} {RNA1509_53547} {RNA1310_33090.1} {RNA815_42141}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_04306

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.996	2.266	1.00000	1.00000
RegionR2	1.573	2.266	0.18608	0.53898
RegionR3	1.558	2.266	0.15260	0.66129
RegionR4	0.954	2.266	0.41108	0.73826
RegionR5	2.056	2.266	0.03104	0.13277
RegionR6	1.676	2.266	0.12641	0.64489
RegionR7	1.933	2.266	0.11687	0.64624
RegionR8	-4.755	2.266	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.267	2.266	0.99999	1.00000
RegenerationR2	-0.657	2.266	0.31472	0.75344
RegenerationR3	0.088	2.266	0.90006	1.00000
RegenerationR4	1.006	2.266	0.18469	0.62580
RegenerationR5	-0.662	2.266	0.31117	0.73663
RegenerationR6	0.566	2.266	0.44240	0.76577
RegenerationBL	1.731	2.266	0.23711	0.59056
RegenerationTP	2.76	2.266	0.13885	0.55658

Genes with expression patterns similar to MligTC455_04306

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04306	140	2.92	Mlig455_029650	Neo: - Age: Down-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_029650 {REF} {Length: 1377} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=19.0]} {RNA1509_53547} {RNA1310_33090.1} {RNA815_42141}
2.	MligTC455_48876	687	14.31	Mlig455_064167	Neo: - Age: - Regeneration-downregulated R2: -1.492 Regeneration-depleted R2: -1.492	CACNB2	1.761	-	-	-	0.805	-	0.956	Mlig455_064167 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=139.1]; Voltage gated calcium channel subunit beta domain 4Aa N terminal [PF12052.10, score=24.3]} {Human: ENSG00000165995, CACNB2, calcium voltage-gated channel auxiliary subunit beta 2, [Score=446, Expect=4e-149]; ENSG00000067191, CACNB1, calcium voltage-gated channel auxiliary subunit beta 1, [Score=426, Expect=8e-143]} {Mouse: ENSMUSG00000057914, Cacnb2, calcium channel, voltage-dependent, beta 2 subunit, [Score=437, Expect=1e-145]} {Dmel: FBgn0259822, Ca-beta, Ca2+-channel-protein-beta-subunit, [Score=460, Expect=2e-157]} {Celegans: WBGene00000368, ccb-1, Calcium Channel, Beta subunit, [Score=325, Expect=3e-104]} {Smed: dd_Smed_v6_9267_0_1, dd_Smed_v6_9267_0_1, [RH, Score=469, Expect=1e-159]} {RNA1509_13952} {RNA1310_9640} {RNA815_20879}
3.	MligTC455_19977	548	11.42	Mlig455_012386	Neo: - Age: -	TLE3	0.962	-	-	-	-	0.962	-	Mlig455_012386 {REF} {Length: 3366} {Pfam: Groucho/TLE N-terminal Q-rich domain [PF03920.17, score=185.1]; WD domain, G-beta repeat [PF00400.34, score=65.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.7]} {Human: ENSG00000140332, TLE3, transducin like enhancer of split 3, [RH, Score=753, Expect=0.0]; ENSG00000196781, TLE1, transducin like enhancer of split 1, [RH, Score=746, Expect=0.0]; ENSG00000106829, TLE4, transducin like enhancer of split 4, [RH, Score=738, Expect=0.0]} {Mouse: ENSMUSG00000032280, Tle3, transducin-like enhancer of split 3, [RH, Score=753, Expect=0.0]; ENSMUSG00000024642, Tle4, transducin-like enhancer of split 4, [RH, Score=738, Expect=0.0]} {Dmel: FBgn0001139, gro, groucho, [RH, Score=652, Expect=0.0]} {Celegans: WBGene00006773, unc-37, Transcription factor unc-37, [RH, Score=420, Expect=1e-137]} {Smed: dd_Smed_v6_4112_0_1, dd_Smed_v6_4112_0_1, [Score=504, Expect=2e-167]} {RNA1509_4212} {RNA1310_3018, RNA1509_4212} {RNA1509_4212, RNA815_5968}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_04306

140

2.92

Mlig455_029650

Neo: -

Age: Down-Down-Up

1.000

Mlig455_029650 {REF} {Length: 1377} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=19.0]} {RNA1509_53547} {RNA1310_33090.1} {RNA815_42141}

MligTC455_48876

687

14.31

Mlig455_064167

Neo: -

Age: -

Regeneration-downregulated R2: -1.492

Regeneration-depleted R2: -1.492

CACNB2

1.761

0.805

0.956

Mlig455_064167 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=139.1]; Voltage gated calcium channel subunit beta domain 4Aa N terminal [PF12052.10, score=24.3]} {Human: ENSG00000165995, CACNB2, calcium voltage-gated channel auxiliary subunit beta 2, [Score=446, Expect=4e-149]; ENSG00000067191, CACNB1, calcium voltage-gated channel auxiliary subunit beta 1, [Score=426, Expect=8e-143]} {Mouse: ENSMUSG00000057914, Cacnb2, calcium channel, voltage-dependent, beta 2 subunit, [Score=437, Expect=1e-145]} {Dmel: FBgn0259822, Ca-beta, Ca2+-channel-protein-beta-subunit, [Score=460, Expect=2e-157]} {Celegans: WBGene00000368, ccb-1, Calcium Channel, Beta subunit, [Score=325, Expect=3e-104]} {Smed: dd_Smed_v6_9267_0_1, dd_Smed_v6_9267_0_1, [RH, Score=469, Expect=1e-159]} {RNA1509_13952} {RNA1310_9640} {RNA815_20879}

MligTC455_19977

548

11.42

Mlig455_012386

Neo: -

Age: -

TLE3

0.962

Mlig455_012386 {REF} {Length: 3366} {Pfam: Groucho/TLE N-terminal Q-rich domain [PF03920.17, score=185.1]; WD domain, G-beta repeat [PF00400.34, score=65.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.7]} {Human: ENSG00000140332, TLE3, transducin like enhancer of split 3, [RH, Score=753, Expect=0.0]; ENSG00000196781, TLE1, transducin like enhancer of split 1, [RH, Score=746, Expect=0.0]; ENSG00000106829, TLE4, transducin like enhancer of split 4, [RH, Score=738, Expect=0.0]} {Mouse: ENSMUSG00000032280, Tle3, transducin-like enhancer of split 3, [RH, Score=753, Expect=0.0]; ENSMUSG00000024642, Tle4, transducin-like enhancer of split 4, [RH, Score=738, Expect=0.0]} {Dmel: FBgn0001139, gro, groucho, [RH, Score=652, Expect=0.0]} {Celegans: WBGene00006773, unc-37, Transcription factor unc-37, [RH, Score=420, Expect=1e-137]} {Smed: dd_Smed_v6_4112_0_1, dd_Smed_v6_4112_0_1, [Score=504, Expect=2e-167]} {RNA1509_4212} {RNA1310_3018, RNA1509_4212} {RNA1509_4212, RNA815_5968}