TomoSeq data search

Data search

Results for MligTC455_04470

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04470	2065	43.03	Mlig455_065742	Neo: - Age: - Regeneration-downregulated R6: -1.532 Regeneration-depleted R6: -1.532		Mlig455_065742 {REF} {Length: 2598} {Pfam: Ammonium Transporter Family [PF00909.23, score=385.1]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=192, Expect=1e-54]} {Celegans: WBGene00000133, amt-1, Putative ammonium transporter 1, [Score=417, Expect=2e-141]} {RNA1509_13635, RNA1509_43971, RNA1509_50467, RNA1509_51781} {RNA1310_9179, RNA1509_43971, RNA1509_50467, RNA1509_51781} {RNA1509_43971, RNA1509_50467, RNA1509_51781, RNA815_11701}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_04470

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.671	5.476	0.26433	0.91389
RegionR2	-0.413	5.476	0.20101	0.56175
RegionR3	-0.2	5.476	0.45793	0.96794
RegionR4	-0.361	5.476	0.25746	0.55894
RegionR5	0.029	5.476	0.90680	1.00000
RegionR6	0.581	5.476	0.02310	0.27614
RegionR7	0.421	5.476	0.14749	0.71459
RegionR8	0.614	5.476	0.05753	0.46905

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.732	5.476	0.42686	1.00000
RegenerationR2	-0.131	5.476	0.67917	0.94859
RegenerationR3	-0.518	5.476	0.11876	0.53656
RegenerationR4	-0.451	5.476	0.18669	0.62878
RegenerationR5	-0.888	5.476	0.00590	0.14128
RegenerationR6	-1.532	5.476	0.00001	0.00169	Specific for R6: -1.532
RegenerationBL	-0.817	5.476	0.01489	0.12793
RegenerationTP	-0.708	5.476	0.04411	0.34847

Genes with expression patterns similar to MligTC455_04470

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04470	2065	43.03	Mlig455_065742	Neo: - Age: - Regeneration-downregulated R6: -1.532 Regeneration-depleted R6: -1.532		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_065742 {REF} {Length: 2598} {Pfam: Ammonium Transporter Family [PF00909.23, score=385.1]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=192, Expect=1e-54]} {Celegans: WBGene00000133, amt-1, Putative ammonium transporter 1, [Score=417, Expect=2e-141]} {RNA1509_13635, RNA1509_43971, RNA1509_50467, RNA1509_51781} {RNA1310_9179, RNA1509_43971, RNA1509_50467, RNA1509_51781} {RNA1509_43971, RNA1509_50467, RNA1509_51781, RNA815_11701}
2.	MligTC455_04469	2294	47.8	Mlig455_045497	Neo: - Age: -		3.584	-	0.845	0.971	0.912	0.856	-	Mlig455_045497 {REF} {Length: 2624} {Pfam: Ammonium Transporter Family [PF00909.23, score=386.5]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=189, Expect=2e-53]} {Celegans: WBGene00000133, amt-1, Putative ammonium transporter 1, [Score=416, Expect=6e-141]} {RNA1509_13635, RNA1509_2284} {RNA1310_8420.2, RNA1509_13635, RNA1509_2284} {RNA1509_13635, RNA1509_2284, RNA815_27.1}
3.	MligTC455_26501	549	11.43	Mlig455_067644	Neo: - Age: Down-Down-Up Region-enriched R2: 1.808/0.01808	DNAH10	0.952	-	-	-	-	0.952	-	Mlig455_067644 {REF} {Length: 5057} {Pfam: ATP-binding dynein motor region [PF12781.9, score=99.8]; Dynein heavy chain C-terminal domain [PF18199.3, score=96.3]; Dynein heavy chain AAA lid domain [PF18198.3, score=37.7]; Microtubule-binding stalk of dynein motor [PF12777.9, score=18.4]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [Score=143, Expect=2e-33]; ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [Score=142, Expect=3e-33]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=136, Expect=2e-31]} {Dmel: FBgn0039510, CG3339, [Score=115, Expect=2e-25]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=60.5, Expect=1e-08]} {Smed: dd_Smed_v6_4113_0_1, dd_Smed_v6_4113_0_1, [Score=532, Expect=1e-159]} {RNA1509_2294} {RNA1310_872.1} {RNA815_291}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_04470

2065

43.03

Mlig455_065742

Neo: -

Age: -

Regeneration-downregulated R6: -1.532

Regeneration-depleted R6: -1.532

1.000

MligTC455_04469

2294

47.8

Mlig455_045497

Neo: -

Age: -

3.584

0.845

0.971

0.912

0.856

Mlig455_045497 {REF} {Length: 2624} {Pfam: Ammonium Transporter Family [PF00909.23, score=386.5]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=189, Expect=2e-53]} {Celegans: WBGene00000133, amt-1, Putative ammonium transporter 1, [Score=416, Expect=6e-141]} {RNA1509_13635, RNA1509_2284} {RNA1310_8420.2, RNA1509_13635, RNA1509_2284} {RNA1509_13635, RNA1509_2284, RNA815_27.1}

MligTC455_26501

549

11.43

Mlig455_067644

Neo: -

Age: Down-Down-Up

Region-enriched R2: 1.808/0.01808

DNAH10

0.952

Mlig455_067644 {REF} {Length: 5057} {Pfam: ATP-binding dynein motor region [PF12781.9, score=99.8]; Dynein heavy chain C-terminal domain [PF18199.3, score=96.3]; Dynein heavy chain AAA lid domain [PF18198.3, score=37.7]; Microtubule-binding stalk of dynein motor [PF12777.9, score=18.4]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [Score=143, Expect=2e-33]; ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [Score=142, Expect=3e-33]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=136, Expect=2e-31]} {Dmel: FBgn0039510, CG3339, [Score=115, Expect=2e-25]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=60.5, Expect=1e-08]} {Smed: dd_Smed_v6_4113_0_1, dd_Smed_v6_4113_0_1, [Score=532, Expect=1e-159]} {RNA1509_2294} {RNA1310_872.1} {RNA815_291}