Data search
Results for MligTC455_04493
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04493 | 5 | 0.10 | Mlig455_038033 | Neo: - Age: Up-Down-Down |
Mlig455_038033 {REF} {Length: 675} {RNA1310_57449} {RNA815_29500.1} |
Cumulative graph for MligTC455_04493
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_04493
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04493 | 5 | 0.1 | Mlig455_038033 | Neo: - Age: Up-Down-Down |
2 | 1.000 | 1.000 | - | - | - | - | Mlig455_038033 {REF} {Length: 675} {RNA1310_57449} {RNA815_29500.1} | |
| 2. | MligTC455_38309 | 6 | 0.13 | Mlig455_005621, Mlig455_044277 | Neo: - Age: - |
1.761 | 0.974 | 0.787 | - | - | - | - | Mlig455_005621 {REF} {Length: 306} {NoTransDecoderORF} {RNA815_36022} Mlig455_044277 {REF} {Length: 641} {RNA1310_78584} {RNA815_36022} |
|
| 3. | MligTC455_00915 | 4 | 0.09 | Mlig455_032896 | Neo: - Age: - |
1.76 | 0.975 | 0.785 | - | - | - | - | Mlig455_032896 {REF} {Length: 525} {NoTransDecoderORF} {RNA1509_36146} {RNA1310_101784} {RNA815_48411} | |
| 4. | MligTC455_00857 | 18 | 0.38 | Mlig455_014064, Mlig455_070130 | Neo: - Age: - |
1.677 | 0.953 | 0.724 | - | - | - | - | Mlig455_014064 {REF} {Length: 295} {NoTransDecoderORF} {RNA1509_32237} {RNA1310_25044} {RNA815_10572} Mlig455_070130 {REF} {Length: 707} {NoTransDecoderORF} {RNA1509_32237} {RNA1310_25044} {RNA815_10572} |
|
| 5. | MligTC455_21369 | 20 | 0.41 | Mlig455_004493 | Neo: Germline Age: - |
0.994 | 0.994 | - | - | - | - | - | Mlig455_004493 {REF} {Length: 649} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=184.3]} {RNA1310_256.1} {RNA815_3111} | |
| 6. | MligTC455_09250 | 13 | 0.28 | Mlig455_060926 | Neo: Germline Age: - |
0.984 | 0.984 | - | - | - | - | - | Mlig455_060926 {REF} {Length: 848} {RNA1509_19862} {RNA1310_41889.2} {RNA815_21034.1} | |
| 7. | MligTC455_03118 | 11 | 0.24 | Mlig455_067827 | Neo: - Age: - Regeneration-downregulated R4: -6.169 Regeneration-depleted R4: -6.169 |
0.979 | 0.979 | - | - | - | - | - | Mlig455_067827 {REF} {Length: 941} {NoTransDecoderORF} {RNA1509_34573} {RNA1310_36103} {RNA815_11571.2} | |
| 8. | MligTC455_06604 | 25 | 0.52 | Mlig455_020786 | Neo: - |
KREMEN1 | 0.976 | 0.976 | - | - | - | - | - | Mlig455_020786 {REF} {Length: 1762} {Pfam: WSC domain [PF01822.21, score=65.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=56.2, Expect=3e-09]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=58.5, Expect=3e-10]} {RNA1509_36914, RNA1509_47848} {RNA1310_9932.1, RNA1509_47848} {RNA1509_47848, RNA815_31064} |
| 9. | MligTC455_28379 | 18 | 0.37 | Mlig455_011163 | Neo: Germline Age: - |
0.975 | 0.975 | - | - | - | - | - | Mlig455_011163 {REF} {Length: 1556} {tRNA: Ser(AGA), score=94.9} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=30.0]} {RNA1509_31312} {RNA1310_80791} {RNA815_42151} | |
| 10. | MligTC455_27127 | 21 | 0.44 | Mlig455_006501 | Neo: - Age: Up-Down-Down |
SETMAR | 0.969 | 0.969 | - | - | - | - | - | Mlig455_006501 {REF} {Length: 1980} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=49.4]; Homeodomain-like domain [PF13565.8, score=34.1]; HTH domain in Mos1 transposase [PF17906.3, score=28.7]; DDE superfamily endonuclease [PF13358.8, score=23.0]; Winged helix-turn helix [PF13551.8, score=19.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=201, Expect=3e-59]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [Score=73.9, Expect=2e-16]} {RNA1509_31473} {RNA1310_29714} {RNA815_20842.1} |
| 11. | MligTC455_12558 | 18 | 0.38 | Mlig455_046920 | Neo: Germline Age: - |
0.968 | 0.968 | - | - | - | - | - | Mlig455_046920 {REF} {Length: 459} {NoTransDecoderORF} {RNA1310_39017} {RNA815_47038} | |
| 12. | MligTC455_05452 | 12 | 0.25 | Mlig455_041935 | Neo: Germline Age: Up-Down-Down |
0.964 | 0.964 | - | - | - | - | - | Mlig455_041935 {REF} {Length: 1279} {NoTransDecoderORF} {RNA1509_56527} {RNA1310_20359} {RNA815_3391.1} | |
| 13. | MligTC455_31798 | 11 | 0.23 | Mlig455_026279 | Neo: - Age: - |
CABP1 | 0.964 | 0.964 | - | - | - | - | - | Mlig455_026279 {REF} {Length: 3246} {TRANSSPLICED} {Pfam: EF hand [PF13202.8, score=72.6]; EF hand [PF00036.34, score=71.8]; EF-hand domain [PF13405.8, score=68.5]; EF-hand domain pair [PF13833.8, score=64.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=64.4]; EF-hand domain pair [PF13499.8, score=62.6]; Dockerin type I domain [PF00404.20, score=21.7]} {Human: ENSG00000157782, CABP1, calcium binding protein 1, [Score=80.1, Expect=1e-15]} {Mouse: ENSMUSG00000029544, Cabp1, calcium binding protein 1, [Score=80.5, Expect=1e-15]} {Celegans: WBGene00018376, F43C9.2, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=75.9, Expect=6e-16]} {RNA1509_23300} {RNA1310_33044} {RNA815_18772} |
| 14. | MligTC455_00961 | 9 | 0.18 | Mlig455_010098 | Neo: - Age: Up-Down-Down |
0.959 | 0.959 | - | - | - | - | - | Mlig455_010098 {REF} {Length: 1991} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.4]; RNase H [PF00075.26, score=47.5]} {RNA1509_50041} {RNA1310_1401} {RNA815_252.1} | |
| 15. | MligTC455_15609 | 40 | 0.83 | Mlig455_013993 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 5.195/0.04952 |
0.959 | 0.959 | - | - | - | - | - | Mlig455_013993 {REF} {Length: 2157} {Pfam: WSC domain [PF01822.21, score=49.2]; PAN domain [PF00024.28, score=28.8]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=48.1, Expect=3e-06]} {RNA1509_45592} {RNA1310_32706.1} {RNA815_19388} | |
| 16. | MligTC455_06552 | 57 | 1.18 | Mlig455_064225 | Neo: Germline Age: Up-Down-Down Region-enriched R4: 3.812/0.00017 |
0.958 | 0.958 | - | - | - | - | - | Mlig455_064225 {REF} {Length: 2375} {RNA1509_40295} {RNA1310_22504} {RNA815_24302} | |
| 17. | MligTC455_04906 | 36 | 0.75 | Mlig455_034059 | Neo: - Age: - |
0.955 | 0.955 | - | - | - | - | - | Mlig455_034059 {REF} {Length: 2199} {Pfam: Aminotransferase class-V [PF00266.21, score=148.8]} {Celegans: WBGene00022195, Y71H2B.5, [Score=377, Expect=1e-118]} {Smed: dd_Smed_v6_16438_0_2, dd_Smed_v6_16438_0_2, [Score=459, Expect=1e-150]} {RNA1310_39070} {RNA815_39939} | |
| 18. | MligTC455_04907 | 37 | 0.77 | Mlig455_060418 | Neo: - Age: - |
0.955 | 0.955 | - | - | - | - | - | Mlig455_060418 {REF} {Length: 1206} {RNA1310_39070} {RNA815_39939} |
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