TomoSeq data search

Data search

Results for MligTC455_04545

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04545

126

2.63

Mlig455_010504

Neo: -

Age: -

Region-enriched R4: 4.736/0.00695

STOM

Mlig455_010504 {REF} {Length: 1453} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=106.9]} {Human: ENSG00000148175, STOM, stomatin, [Score=267, Expect=3e-88]; ENSG00000133115, STOML3, stomatin like 3, [Score=257, Expect=2e-84]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=265, Expect=1e-87]} {Dmel: FBgn0260657, CG42540, [Score=270, Expect=2e-88]} {Celegans: WBGene00006063, sto-1, Stomatin-1, [Score=270, Expect=5e-89]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=298, Expect=9e-101]} {RNA1310_63465} {RNA815_40185}

Cumulative graph for MligTC455_04545

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.236	2.108	0.99970	1.00000
RegionR2	0.749	2.108	0.33060	0.72290
RegionR3	2.227	2.108	0.03719	0.33505
RegionR4	4.736	2.108	0.00060	0.00695
RegionR5	-1.488	2.108	0.99969	1.00000
RegionR6	-0.543	2.108	0.66817	1.00000
RegionR7	-2.713	2.108	0.99974	1.00000
RegionR8	-1.733	2.108	0.99971	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.443	2.108	0.27054	0.97398
RegenerationR2	0.962	2.108	0.13814	0.56660
RegenerationR3	-1.218	2.108	0.13696	0.56222
RegenerationR4	-2.229	2.108	0.03289	0.29298
RegenerationR5	3.757	2.108	0.00203	0.07791
RegenerationR6	2.682	2.108	0.02228	0.18520
RegenerationBL	2.816	2.108	0.13335	0.43510
RegenerationTP	3.896	2.108	0.11323	0.51676

Genes with expression patterns similar to MligTC455_04545

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04545	126	2.63	Mlig455_010504	Neo: - Age: - Region-enriched R4: 4.736/0.00695	STOM	4	-	-	1.000	1.000	1.000	1.000	Mlig455_010504 {REF} {Length: 1453} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=106.9]} {Human: ENSG00000148175, STOM, stomatin, [Score=267, Expect=3e-88]; ENSG00000133115, STOML3, stomatin like 3, [Score=257, Expect=2e-84]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=265, Expect=1e-87]} {Dmel: FBgn0260657, CG42540, [Score=270, Expect=2e-88]} {Celegans: WBGene00006063, sto-1, Stomatin-1, [Score=270, Expect=5e-89]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=298, Expect=9e-101]} {RNA1310_63465} {RNA815_40185}
2.	MligTC455_38630	121	2.51	Mlig455_043227, Mlig455_045506, Mlig455_049669	Neo: - Age: -		1.844	-	-	0.965	0.879	-	-	Mlig455_043227 {REF} {Length: 228} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_24332} {RNA815_21848} Mlig455_045506 {REF} {Length: 771} {RNA1509_40552} {RNA1310_97623} {RNA815_43995.1} Mlig455_049669 {REF} {Length: 690} {RNA1509_57867} {RNA1310_1374.1} {RNA815_21848}
3.	MligTC455_29344	358	7.46	Mlig455_037677, Mlig455_060573	Neo: - Age: Up-Down-Down		1.791	-	-	0.982	-	-	0.809	Mlig455_037677 {REF} {Length: 5739} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.8]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=48.9, Expect=1e-07]} {RNA1509_13072} {RNA1310_3487} {RNA815_17419} Mlig455_060573 {REF} {Length: 2073} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.1]; Endonuclease-reverse transcriptase [PF14529.8, score=24.7]} {RNA1509_13072} {RNA1310_3487} {RNA815_20795}
4.	MligTC455_09098	255	5.3	Mlig455_069847	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_069847 {REF} {Length: 1976} {TRANSSPLICED} {RNA1509_49382} {RNA1310_23538, RNA1509_49382} {RNA1509_49382, RNA815_8322}
5.	MligTC455_46964	187	3.89	Mlig455_059229	Neo: Int S/G2/M Age: -	HINFP	0.963	-	-	-	0.963	-	-	Mlig455_059229 {REF} {Length: 2982} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=28.3]; C2H2-type zinc-finger domain [PF13909.8, score=21.1]; C2H2-type zinc finger [PF13912.8, score=20.8]; C2H2-type zinc finger [PF13894.8, score=20.5]; Zinc-finger double domain [PF13465.8, score=19.6]} {Human: ENSG00000172273, HINFP, histone H4 transcription factor, [RH, Score=181, Expect=6e-50]} {Mouse: ENSMUSG00000032119, Hinfp, histone H4 transcription factor, [RH, Score=179, Expect=2e-50]} {Dmel: FBgn0025635, CG17829, [RH, Score=146, Expect=4e-38]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [RH, Score=114, Expect=9e-27]} {Smed: dd_Smed_v6_12249_0_1, dd_Smed_v6_12249_0_1, [RH, Score=120, Expect=6e-29]} {RNA1509_18019} {RNA1310_10490, RNA1509_18019} {RNA1509_18019, RNA815_19545}
6.	MligTC455_05826	98	2.03	Mlig455_023048	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_023048 {REF} {Length: 255} {NoTransDecoderORF} {RNA1509_15690} {RNA1310_208} {RNA815_44812}
7.	MligTC455_27889	2084	43.43	Mlig455_047138	Neo: - Age: -	SHROOM4	0.955	-	-	-	-	0.955	-	Mlig455_047138 {REF} {Length: 4202} {Pfam: Apx/Shroom domain ASD2 [PF08687.13, score=67.8]} {Human: ENSG00000158352, SHROOM4, shroom family member 4, [RH, Score=75.5, Expect=1e-13]} {Mouse: ENSMUSG00000068270, Shroom4, shroom family member 4, [RH, Score=74.7, Expect=1e-13]} {RNA1509_11849, RNA1509_22474, RNA1509_36133, RNA1509_47730, RNA1509_48771, RNA1509_59162, RNA1509_7561} {RNA1310_1315.2, RNA1509_11849, RNA1509_22474, RNA1509_36133, RNA1509_47730, RNA1509_48771, RNA1509_59162, RNA1509_7561} {RNA1509_11849, RNA1509_22474, RNA1509_36133, RNA1509_47730, RNA1509_48771, RNA1509_59162, RNA1509_7561, RNA815_16185}
8.	MligTC455_29142	126	2.62	Mlig455_011612	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_011612 {REF} {Length: 1010} {NoTransDecoderORF} {RNA1310_78999}
9.	MligTC455_45148	212	4.41	Mlig455_027575	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.513		0.954	-	-	-	-	0.954	-	Mlig455_027575 {REF} {Length: 3134} {Pfam: Prominin [PF05478.13, score=19.5]} {RNA1509_42069} {RNA1310_6083, RNA1509_42069} {RNA1509_42069, RNA815_5815}

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