TomoSeq data search

Data search

Results for MligTC455_04629

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04629

108

2.25

Mlig455_056735

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.414

TMCO4

Mlig455_056735 {REF} {Length: 4699} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF726) [PF05277.14, score=380.3]; Lecithin:cholesterol acyltransferase [PF02450.17, score=18.6]} {Human: ENSG00000162542, TMCO4, transmembrane and coiled-coil domains 4, [RH, Score=390, Expect=2e-127]} {Mouse: ENSMUSG00000041143, Tmco4, transmembrane and coiled-coil domains 4, [RH, Score=400, Expect=2e-131]} {Celegans: WBGene00018044, F35D11.3, Uncharacterized membrane protein F35D11.3, [RH, Score=361, Expect=2e-116]} {RNA1509_34560} {RNA1310_11691.2} {RNA815_11250.1}

Cumulative graph for MligTC455_04629

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.35	2.144	0.56206	1.00000
RegionR2	0.062	2.144	0.85267	1.00000
RegionR3	0.624	2.144	0.53098	1.00000
RegionR4	0.689	2.144	0.54842	0.86952
RegionR5	0.804	2.144	0.37100	0.72395
RegionR6	0.49	2.144	0.63000	1.00000
RegionR7	0.627	2.144	0.63458	1.00000
RegionR8	0.054	2.144	0.86658	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.319	2.144	0.99980	1.00000
RegenerationR2	1.114	2.144	0.11707	0.53237
RegenerationR3	-0.044	2.144	0.96090	1.00000
RegenerationR4	0.308	2.144	0.74098	0.96771
RegenerationR5	-0.202	2.144	0.76613	0.97765
RegenerationR6	0.737	2.144	0.31880	0.66598
RegenerationBL	1.729	2.144	0.09217	0.35645
RegenerationTP	-0.52	2.144	0.69391	1.00000

Genes with expression patterns similar to MligTC455_04629

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04629	108	2.25	Mlig455_056735	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.414	TMCO4	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_056735 {REF} {Length: 4699} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF726) [PF05277.14, score=380.3]; Lecithin:cholesterol acyltransferase [PF02450.17, score=18.6]} {Human: ENSG00000162542, TMCO4, transmembrane and coiled-coil domains 4, [RH, Score=390, Expect=2e-127]} {Mouse: ENSMUSG00000041143, Tmco4, transmembrane and coiled-coil domains 4, [RH, Score=400, Expect=2e-131]} {Celegans: WBGene00018044, F35D11.3, Uncharacterized membrane protein F35D11.3, [RH, Score=361, Expect=2e-116]} {RNA1509_34560} {RNA1310_11691.2} {RNA815_11250.1}
2.	MligTC455_04628	258	5.36	Mlig455_013973, Mlig455_035000	Neo: - Age: logFC(26M/2M)=0.276	TMCO4	4.462	0.976	0.945	-	0.717	0.952	0.872	Mlig455_013973 {REF} {Length: 4098} {Pfam: Protein of unknown function (DUF726) [PF05277.14, score=121.8]} {Human: ENSG00000162542, TMCO4, transmembrane and coiled-coil domains 4, [Score=124, Expect=1e-30]} {Mouse: ENSMUSG00000041143, Tmco4, transmembrane and coiled-coil domains 4, [Score=139, Expect=2e-36]} {Celegans: WBGene00018044, F35D11.3, Uncharacterized membrane protein F35D11.3, [Score=134, Expect=1e-34]} {RNA1509_13973} {RNA1310_11691.2} {RNA815_11250.1} Mlig455_035000 {REF} {Length: 3761} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF726) [PF05277.14, score=306.3]; Lecithin:cholesterol acyltransferase [PF02450.17, score=18.7]} {Human: ENSG00000162542, TMCO4, transmembrane and coiled-coil domains 4, [Score=330, Expect=3e-104]} {Mouse: ENSMUSG00000041143, Tmco4, transmembrane and coiled-coil domains 4, [Score=289, Expect=9e-89]} {Celegans: WBGene00018044, F35D11.3, Uncharacterized membrane protein F35D11.3, [Score=311, Expect=1e-97]} {RNA1509_13973, RNA1509_46091} {RNA1310_11626, RNA1509_46091} {RNA1509_46091, RNA815_11250.1}
3.	MligTC455_03891	123	2.56	Mlig455_050023	Neo: - Age: -	IMMP2L	0.957	-	-	-	-	-	0.957	Mlig455_050023 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: Signal peptidase, peptidase S26 [PF10502.11, score=30.2]} {Human: ENSG00000184903, IMMP2L, inner mitochondrial membrane peptidase subunit 2, [RH, Score=53.9, Expect=4e-08]} {Dmel: FBgn0034535, CG11110, [RH, Score=53.5, Expect=3e-08]} {RNA1509_29174} {RNA1310_34623} {RNA815_15967}
4.	MligTC455_20354	66	1.38	Mlig455_043446	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_043446 {REF} {Length: 2134} {NoTransDecoderORF} {RNA1509_49770} {RNA1310_75709} {RNA815_12664}

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