Data search
Results for MligTC455_04861
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04861 | 102 | 2.12 | Mlig455_066621 | Neo: - Age: Up-Up-Down |
NR4A1 | Mlig455_066621 {REF} {Length: 3029} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=106.5]} {Human: ENSG00000123358, NR4A1, nuclear receptor subfamily 4 group A member 1, [RH, Score=192, Expect=3e-52]; ENSG00000153234, NR4A2, nuclear receptor subfamily 4 group A member 2, [RH, Score=188, Expect=6e-51]} {Mouse: ENSMUSG00000026826, Nr4a2, nuclear receptor subfamily 4, group A, member 2, [RH, Score=189, Expect=4e-51]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [RH, Score=184, Expect=2e-49]} {Dmel: FBgn0014859, Hr38, Hormone receptor-like in 38, [RH, Score=179, Expect=8e-47]} {Celegans: WBGene00003605, nhr-6, Nuclear hormone receptor family member nhr-6, [RH, Score=156, Expect=6e-40]} {Smed: dd_Smed_v6_12229_0_1, dd_Smed_v6_12229_0_1, [RH, Score=261, Expect=1e-75]} {RNA1310_13705} {RNA815_13974} |
Cumulative graph for MligTC455_04861
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.595 | 1.902 | 1.00000 | 1.00000 | |
| RegionR2 | 0.307 | 1.902 | 0.69861 | 1.00000 | |
| RegionR3 | 0.339 | 1.902 | 0.66496 | 1.00000 | |
| RegionR4 | -0.08 | 1.902 | 0.78110 | 1.00000 | |
| RegionR5 | 0.458 | 1.902 | 0.60888 | 0.96569 | |
| RegionR6 | 2.662 | 1.902 | 0.01119 | 0.18034 | |
| RegionR7 | 2.948 | 1.902 | 0.02055 | 0.26632 | |
| RegionR8 | -3.038 | 1.902 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.118 | 1.902 | 0.35176 | 1.00000 | |
| RegenerationR2 | 0.533 | 1.902 | 0.56101 | 0.89900 | |
| RegenerationR3 | 0.5 | 1.902 | 0.61832 | 0.91583 | |
| RegenerationR4 | 0.124 | 1.902 | 0.90679 | 1.00000 | |
| RegenerationR5 | 0.241 | 1.902 | 0.79548 | 0.98738 | |
| RegenerationR6 | -0.64 | 1.902 | 0.39189 | 0.73126 | |
| RegenerationBL | -5.066 | 1.902 | 1.00000 | 1.00000 | |
| RegenerationTP | 1.066 | 1.902 | 0.58933 | 0.95484 |
Genes with expression patterns similar to MligTC455_04861
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04861 | 102 | 2.12 | Mlig455_066621 | Neo: - Age: Up-Up-Down |
NR4A1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066621 {REF} {Length: 3029} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=106.5]} {Human: ENSG00000123358, NR4A1, nuclear receptor subfamily 4 group A member 1, [RH, Score=192, Expect=3e-52]; ENSG00000153234, NR4A2, nuclear receptor subfamily 4 group A member 2, [RH, Score=188, Expect=6e-51]} {Mouse: ENSMUSG00000026826, Nr4a2, nuclear receptor subfamily 4, group A, member 2, [RH, Score=189, Expect=4e-51]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [RH, Score=184, Expect=2e-49]} {Dmel: FBgn0014859, Hr38, Hormone receptor-like in 38, [RH, Score=179, Expect=8e-47]} {Celegans: WBGene00003605, nhr-6, Nuclear hormone receptor family member nhr-6, [RH, Score=156, Expect=6e-40]} {Smed: dd_Smed_v6_12229_0_1, dd_Smed_v6_12229_0_1, [RH, Score=261, Expect=1e-75]} {RNA1310_13705} {RNA815_13974} |
| 2. | MligTC455_43050 | 213 | 4.44 | Mlig455_020082 | Neo: - Age: - |
CD63 | 2.408 | 0.713 | - | 0.738 | - | - | 0.957 | Mlig455_020082 {REF} {Length: 1956} {Pfam: Tetraspanin family [PF00335.22, score=138.9]} {Human: ENSG00000135404, CD63, CD63 molecule, [Score=72.4, Expect=2e-14]; ENSG00000000003, TSPAN6, tetraspanin 6, [Score=69.7, Expect=2e-13]; ENSG00000158457, TSPAN33, tetraspanin 33, [Score=68.9, Expect=6e-13]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=68.9, Expect=4e-13]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=71.2, Expect=4e-14]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=70.1, Expect=8e-14]; ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=69.7, Expect=1e-13]; ENSMUSG00000001763, Tspan33, tetraspanin 33, [Score=68.9, Expect=4e-13]; ENSMUSG00000037824, Tspan14, tetraspanin 14, [Score=67.8, Expect=1e-12]} {Dmel: FBgn0029507, Tsp42Ed, Tetraspanin 42Ed, [Score=62.4, Expect=3e-11]} {Celegans: WBGene00023491, tsp-21, Tetraspanin, [Score=53.5, Expect=5e-08]} {Smed: dd_Smed_v6_354_0_1, dd_Smed_v6_354_0_1, [Score=106, Expect=5e-27]} {RNA1509_24501, RNA1509_4018, RNA1509_40183} {RNA1310_9350, RNA1509_24501, RNA1509_40183} {RNA1509_24501, RNA1509_40183, RNA815_4900.1} |
| 3. | MligTC455_27737 | 1336 | 27.84 | Mlig455_056926 | Neo: - Age: logFC(26M/2M)=-0.801 Region-specific R6: 7.000 Region-enriched R6: 7.332/0.00000 |
1.711 | 0.736 | - | 0.975 | - | - | - | Mlig455_056926 {REF} {Length: 233} {NoTransDecoderORF} {RNA1509_11291} {RNA1310_76104.1} {RNA815_39096} | |
| 4. | MligTC455_08421 | 19 | 0.4 | Mlig455_049304 | Neo: - Age: - |
TOGARAM1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_049304 {REF} {Length: 6458} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=25.7]; CLASP N terminal [PF12348.10, score=21.8]; HEAT repeat [PF02985.24, score=21.5]} {Human: ENSG00000198718, TOGARAM1, TOG array regulator of axonemal microtubules 1, [Score=209, Expect=2e-53]} {Mouse: ENSMUSG00000035614, Togaram1, TOG array regulator of axonemal microtubules 1, [Score=210, Expect=5e-54]} {Dmel: FBgn0259818, CG42399, [Score=113, Expect=1e-24]} {Celegans: WBGene00000491, che-12, Crescerin-like protein che-12, [Score=123, Expect=3e-28]} {Smed: dd_Smed_v6_13421_0_1, dd_Smed_v6_13421_0_1, [Score=210, Expect=2e-54]} {RNA1509_21714} {RNA1310_5410.1} {RNA815_4279.1} |
Berezikov Lab - 2020-2021 © ERIBA