TomoSeq data search

Data search

Results for MligTC455_04996

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04996	46	0.96	Mlig455_060212, Mlig455_070473	Neo: - Age: -	AC243734.1	Mlig455_060212 {REF} {Length: 793} {RNA1509_5492} {RNA1310_145070} Mlig455_070473 {REF} {Length: 4360} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=219.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=144.9]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=308, Expect=1e-97]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=308, Expect=1e-97]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=304, Expect=3e-96]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=294, Expect=3e-92]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=293, Expect=6e-92]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=310, Expect=2e-98]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=295, Expect=6e-93]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=336, Expect=7e-108]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=317, Expect=5e-101]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=580, Expect=0.0]} {RNA1509_5492} {RNA1310_32918} {RNA815_47422}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04996

0.96

Mlig455_060212, Mlig455_070473

Neo: -

Age: -

AC243734.1

Mlig455_060212 {REF} {Length: 793} {RNA1509_5492} {RNA1310_145070}

Mlig455_070473 {REF} {Length: 4360} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=219.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=144.9]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=308, Expect=1e-97]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=308, Expect=1e-97]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=304, Expect=3e-96]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=294, Expect=3e-92]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=293, Expect=6e-92]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=310, Expect=2e-98]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=295, Expect=6e-93]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=336, Expect=7e-108]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=317, Expect=5e-101]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=580, Expect=0.0]} {RNA1509_5492} {RNA1310_32918} {RNA815_47422}

Cumulative graph for MligTC455_04996

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.045	1.31	0.99970	1.00000
RegionR2	2.516	1.31	0.24411	0.62062
RegionR3	0.995	1.31	0.56952	1.00000
RegionR4	-0.939	1.31	0.92317	1.00000
RegionR5	-0.368	1.31	0.90482	1.00000
RegionR6	0.663	1.31	0.69080	1.00000
RegionR7	2.837	1.31	0.19736	0.80406
RegionR8	-2.658	1.31	0.99966	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.621	1.31	0.99984	1.00000
RegenerationR2	2.06	1.31	0.07562	0.44386
RegenerationR3	0.918	1.31	0.51148	0.86212
RegenerationR4	1.332	1.31	0.55237	0.89331
RegenerationR5	1.659	1.31	0.25958	0.69118
RegenerationR6	0.203	1.31	0.82641	0.98945
RegenerationBL	-1.624	1.31	1.00000	1.00000
RegenerationTP	-1.639	1.31	0.99969	1.00000

Genes with expression patterns similar to MligTC455_04996

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04996	46	0.96	Mlig455_060212, Mlig455_070473	Neo: - Age: -	AC243734.1	4	1.000	1.000	-	-	1.000	1.000	Mlig455_060212 {REF} {Length: 793} {RNA1509_5492} {RNA1310_145070} Mlig455_070473 {REF} {Length: 4360} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=219.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=144.9]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=308, Expect=1e-97]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=308, Expect=1e-97]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=304, Expect=3e-96]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=294, Expect=3e-92]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=293, Expect=6e-92]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=310, Expect=2e-98]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=295, Expect=6e-93]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=336, Expect=7e-108]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=317, Expect=5e-101]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=580, Expect=0.0]} {RNA1509_5492} {RNA1310_32918} {RNA815_47422}
2.	MligTC455_45851	33	0.69	Mlig455_020386	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_020386 {REF} {Length: 590} {RNA1509_48193} {RNA1310_97125}
3.	MligTC455_47796	23	0.47	Mlig455_056416	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_056416 {REF} {Length: 231} {NoTransDecoderORF} {RNA1509_33034} {RNA1310_614.1} {RNA815_37227}
4.	MligTC455_10110	11	0.23	Mlig455_063965	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_063965 {REF} {Length: 732} {NoTransDecoderORF}