TomoSeq data search

Data search

Results for MligTC455_05309

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_05309	178	3.70	Mlig455_033715, Mlig455_050115	Neo: - Age: - Region-enriched R3: 2.974/0.00649	SOX15	Mlig455_033715 {REF} {Length: 3272} {Pfam: HMG (high mobility group) box [PF00505.21, score=88.3]; HMG-box domain [PF09011.12, score=30.7]} {Human: ENSG00000129194, SOX15, SRY-box 15, [Score=124, Expect=2e-33]; ENSG00000181449, SOX2, SRY-box 2, [Score=123, Expect=2e-32]; ENSG00000182968, SOX1, SRY-box 1, [Score=121, Expect=4e-31]; ENSG00000168875, SOX14, SRY-box 14, [Score=121, Expect=3e-32]; ENSG00000125285, SOX21, SRY-box 21, [Score=120, Expect=8e-32]; ENSG00000134595, SOX3, SRY-box 3, [Score=118, Expect=2e-29]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=123, Expect=1e-32]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=121, Expect=2e-31]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=121, Expect=2e-32]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=121, Expect=4e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=117, Expect=2e-29]} {Dmel: FBgn0036411, Sox21a, [Score=126, Expect=4e-33]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=124, Expect=4e-34]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=126, Expect=1e-32]} {RNA1509_9650} {RNA1310_33158} {RNA815_50761} Mlig455_050115 {REF} {Length: 3117} {Pfam: HMG (high mobility group) box [PF00505.21, score=88.6]; HMG-box domain [PF09011.12, score=31.0]} {Human: ENSG00000129194, SOX15, SRY-box 15, [Score=125, Expect=3e-34]; ENSG00000181449, SOX2, SRY-box 2, [Score=124, Expect=3e-33]; ENSG00000125285, SOX21, SRY-box 21, [Score=122, Expect=1e-32]; ENSG00000182968, SOX1, SRY-box 1, [Score=122, Expect=6e-32]; ENSG00000168875, SOX14, SRY-box 14, [Score=122, Expect=3e-33]; ENSG00000134595, SOX3, SRY-box 3, [Score=119, Expect=3e-30]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=124, Expect=2e-33]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=122, Expect=7e-33]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=122, Expect=2e-33]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=122, Expect=4e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=118, Expect=3e-30]} {Dmel: FBgn0036411, Sox21a, [Score=127, Expect=4e-34]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=125, Expect=5e-35]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=127, Expect=2e-33]} {RNA1310_33158} {RNA815_50761}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05309

178

3.70

Mlig455_033715, Mlig455_050115

Neo: -

Age: -

Region-enriched R3: 2.974/0.00649

SOX15

Mlig455_033715 {REF} {Length: 3272} {Pfam: HMG (high mobility group) box [PF00505.21, score=88.3]; HMG-box domain [PF09011.12, score=30.7]} {Human: ENSG00000129194, SOX15, SRY-box 15, [Score=124, Expect=2e-33]; ENSG00000181449, SOX2, SRY-box 2, [Score=123, Expect=2e-32]; ENSG00000182968, SOX1, SRY-box 1, [Score=121, Expect=4e-31]; ENSG00000168875, SOX14, SRY-box 14, [Score=121, Expect=3e-32]; ENSG00000125285, SOX21, SRY-box 21, [Score=120, Expect=8e-32]; ENSG00000134595, SOX3, SRY-box 3, [Score=118, Expect=2e-29]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=123, Expect=1e-32]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=121, Expect=2e-31]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=121, Expect=2e-32]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=121, Expect=4e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=117, Expect=2e-29]} {Dmel: FBgn0036411, Sox21a, [Score=126, Expect=4e-33]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=124, Expect=4e-34]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=126, Expect=1e-32]} {RNA1509_9650} {RNA1310_33158} {RNA815_50761}

Mlig455_050115 {REF} {Length: 3117} {Pfam: HMG (high mobility group) box [PF00505.21, score=88.6]; HMG-box domain [PF09011.12, score=31.0]} {Human: ENSG00000129194, SOX15, SRY-box 15, [Score=125, Expect=3e-34]; ENSG00000181449, SOX2, SRY-box 2, [Score=124, Expect=3e-33]; ENSG00000125285, SOX21, SRY-box 21, [Score=122, Expect=1e-32]; ENSG00000182968, SOX1, SRY-box 1, [Score=122, Expect=6e-32]; ENSG00000168875, SOX14, SRY-box 14, [Score=122, Expect=3e-33]; ENSG00000134595, SOX3, SRY-box 3, [Score=119, Expect=3e-30]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=124, Expect=2e-33]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=122, Expect=7e-33]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=122, Expect=2e-33]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=122, Expect=4e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=118, Expect=3e-30]} {Dmel: FBgn0036411, Sox21a, [Score=127, Expect=4e-34]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=125, Expect=5e-35]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=127, Expect=2e-33]} {RNA1310_33158} {RNA815_50761}

Cumulative graph for MligTC455_05309

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.748	2.602	0.99966	1.00000
RegionR2	1.444	2.602	0.23250	0.60498
RegionR3	2.974	2.602	0.00015	0.00649
RegionR4	0.822	2.602	0.44796	0.77713
RegionR5	0.827	2.602	0.41713	0.77688
RegionR6	1.338	2.602	0.22591	0.80762
RegionR7	1.961	2.602	0.10894	0.62675
RegionR8	-4.618	2.602	0.99954	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.902	2.602	0.99994	1.00000
RegenerationR2	-0.65	2.602	0.39188	0.80907
RegenerationR3	0.397	2.602	0.49502	0.85605
RegenerationR4	2.296	2.602	0.00077	0.02936
RegenerationR5	2.15	2.602	0.00027	0.02579
RegenerationR6	2.448	2.602	0.00015	0.01127
RegenerationBL	0.577	2.602	0.68292	1.00000
RegenerationTP	3.274	2.602	0.06414	0.40973

Genes with expression patterns similar to MligTC455_05309

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_05309	178	3.7	Mlig455_033715, Mlig455_050115	Neo: - Age: - Region-enriched R3: 2.974/0.00649	SOX15	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033715 {REF} {Length: 3272} {Pfam: HMG (high mobility group) box [PF00505.21, score=88.3]; HMG-box domain [PF09011.12, score=30.7]} {Human: ENSG00000129194, SOX15, SRY-box 15, [Score=124, Expect=2e-33]; ENSG00000181449, SOX2, SRY-box 2, [Score=123, Expect=2e-32]; ENSG00000182968, SOX1, SRY-box 1, [Score=121, Expect=4e-31]; ENSG00000168875, SOX14, SRY-box 14, [Score=121, Expect=3e-32]; ENSG00000125285, SOX21, SRY-box 21, [Score=120, Expect=8e-32]; ENSG00000134595, SOX3, SRY-box 3, [Score=118, Expect=2e-29]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=123, Expect=1e-32]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=121, Expect=2e-31]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=121, Expect=2e-32]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=121, Expect=4e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=117, Expect=2e-29]} {Dmel: FBgn0036411, Sox21a, [Score=126, Expect=4e-33]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=124, Expect=4e-34]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=126, Expect=1e-32]} {RNA1509_9650} {RNA1310_33158} {RNA815_50761} Mlig455_050115 {REF} {Length: 3117} {Pfam: HMG (high mobility group) box [PF00505.21, score=88.6]; HMG-box domain [PF09011.12, score=31.0]} {Human: ENSG00000129194, SOX15, SRY-box 15, [Score=125, Expect=3e-34]; ENSG00000181449, SOX2, SRY-box 2, [Score=124, Expect=3e-33]; ENSG00000125285, SOX21, SRY-box 21, [Score=122, Expect=1e-32]; ENSG00000182968, SOX1, SRY-box 1, [Score=122, Expect=6e-32]; ENSG00000168875, SOX14, SRY-box 14, [Score=122, Expect=3e-33]; ENSG00000134595, SOX3, SRY-box 3, [Score=119, Expect=3e-30]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=124, Expect=2e-33]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=122, Expect=7e-33]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=122, Expect=2e-33]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=122, Expect=4e-32]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=118, Expect=3e-30]} {Dmel: FBgn0036411, Sox21a, [Score=127, Expect=4e-34]} {Celegans: WBGene00004950, sox-3, SOX (Mammalian SRY box) family, [Score=125, Expect=5e-35]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [Score=127, Expect=2e-33]} {RNA1310_33158} {RNA815_50761}
2.	MligTC455_22839	196	4.08	Mlig455_012790	Neo: Int S/G2/M Age: - Region-enriched R4: 3.236/0.00438 Region-enriched R5: 2.476/0.01080		1.713	-	-	0.950	-	0.763	-	Mlig455_012790 {REF} {Length: 906} {NoTransDecoderORF} {RNA1509_60113} {RNA1310_37938.1} {RNA815_28362.1}
3.	MligTC455_32082	194	4.04	Mlig455_017495	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_017495 {REF} {Length: 1096} {RNA1509_39047} {RNA1310_104151} {RNA815_36697}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts