M. lignano Tomo-Seq
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Results for MligTC455_05386

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05386 26 0.55 Mlig455_039670

Neo: -

Age: Up-Down-Up

 Mlig455_039670 {REF} {Length: 2324} {RNA1310_68848} {RNA815_40212}

Cumulative graph for MligTC455_05386

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_05386

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05386 26 0.55 Mlig455_039670

Neo: -

Age: Up-Down-Up

 1 - - - - - 1.000 Mlig455_039670 {REF} {Length: 2324} {RNA1310_68848} {RNA815_40212}
2. MligTC455_09194 22 0.46 Mlig455_033399

Neo: -

Age: -

 GIMAP4 0.983 - - - - - 0.983 Mlig455_033399 {REF} {Length: 1546} {Pfam: AIG1 family [PF04548.18, score=122.9]; 50S ribosome-binding GTPase [PF01926.25, score=42.8]; Dynamin family [PF00350.25, score=29.0]; RsgA GTPase [PF03193.18, score=21.9]; Ferrous iron transport protein B [PF02421.20, score=20.2]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=95.1, Expect=7e-22]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.0, Expect=4e-21]; ENSMUSG00000054435, Gimap4, GTPase, IMAP family member 4, [Score=89.4, Expect=6e-20]} {RNA1310_70178}
3. MligTC455_37768 21 0.43 Mlig455_040181

Neo: -

Age: -

 GIMAP4 0.979 - - - - - 0.979 Mlig455_040181 {REF} {Length: 1622} {Pfam: AIG1 family [PF04548.18, score=121.3]; 50S ribosome-binding GTPase [PF01926.25, score=40.0]; Dynamin family [PF00350.25, score=29.1]; RsgA GTPase [PF03193.18, score=20.8]; AAA ATPase domain [PF13191.8, score=20.8]; ABC transporter [PF00005.29, score=20.7]; AAA domain [PF13476.8, score=19.8]; Ferrous iron transport protein B [PF02421.20, score=19.4]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=92.8, Expect=1e-20]; ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=89.4, Expect=1e-19]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.4, Expect=6e-21]} {Smed: dd_Smed_v6_13631_0_6, dd_Smed_v6_13631_0_6, [RH, Score=51.6, Expect=2e-08]} {RNA1509_8439} {RNA1310_70178} {RNA815_62940}
4. MligTC455_43111 28 0.59 Mlig455_046463

Neo: -

Age: -

 PRR9 0.974 - - - - - 0.974 Mlig455_046463 {REF} {Length: 3065} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.4, Expect=3e-07]} {RNA1509_24621} {RNA1310_32442.3} {RNA815_2814.1}
5. MligTC455_08948 7 0.14 Mlig455_029985

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_029985 {REF} {Length: 728} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_111161}
6. MligTC455_15460 271 5.65 Mlig455_001644, Mlig455_001708

Neo: -

Age: -

Region-enriched R8: 3.592/0.03504
Region-enriched R7: 3.324/0.02643

 0.952 - - - - - 0.952

Mlig455_001644 {REF} {Length: 1595} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=28.7]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [Score=137, Expect=2e-36]} {RNA1509_56048} {RNA1310_10124} {RNA815_17803}

Mlig455_001708 {REF} {Length: 2658} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=151.7]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_28097_0_1, dd_Smed_v6_28097_0_1, [Score=332, Expect=4e-107]} {RNA1509_56048} {RNA1310_10124, RNA1509_56048} {RNA1509_56048, RNA815_17803}

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