Data search
Results for MligTC455_05449
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_05449 | 15 | 0.31 | Mlig455_005101 | Neo: - Age: - |
Mlig455_005101 {REF} {Length: 325} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_29520} |
Cumulative graph for MligTC455_05449
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_05449
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_05449 | 15 | 0.31 | Mlig455_005101 | Neo: - Age: - |
1 | - | - | 1.000 | - | - | - | Mlig455_005101 {REF} {Length: 325} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_29520} | |
| 2. | MligTC455_31285 | 31 | 0.64 | Mlig455_008328, Mlig455_019046 | Neo: - Age: Up-Down-Up |
1 | - | - | 1.000 | - | - | - | Mlig455_008328 {REF} {Length: 219} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_52115} {RNA815_29520} Mlig455_019046 {REF} {Length: 686} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_29520} |
|
| 3. | MligTC455_41742 | 48 | 1 | Mlig455_002367, Mlig455_044569 | Neo: - Age: - |
0.966 | - | - | 0.966 | - | - | - | Mlig455_002367 {REF} {Length: 416} {RNA1310_97120} {RNA815_50408} Mlig455_044569 {REF} {Length: 416} {RNA1310_97120} {RNA815_50408} |
|
| 4. | MligTC455_28321 | 81 | 1.69 | Mlig455_060693 | Neo: - Age: - |
0.964 | - | - | 0.964 | - | - | - | Mlig455_060693 {REF} {Length: 1631} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=46.4]; Recombination endonuclease VII [PF02945.17, score=22.6]} {Celegans: WBGene00022511, ZC53.4, [Score=177, Expect=4e-47]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=218, Expect=6e-63]} {RNA1509_8360} {RNA1310_576.1} {RNA815_1671.1} | |
| 5. | MligTC455_46227 | 24 | 0.5 | Mlig455_045153 | Neo: - Age: - Region-enriched R4: 2.763/0.03631 |
0.961 | - | - | 0.961 | - | - | - | Mlig455_045153 {REF} {Length: 2701} {NoTransDecoderORF} {RNA1509_41972} {RNA1310_35514} {RNA815_57191.1} | |
| 6. | MligTC455_53931 | 61 | 1.27 | Mlig455_058086 | Neo: - Age: - Region-enriched R1: 12.708/0.03767 |
0.954 | - | - | 0.954 | - | - | - | Mlig455_058086 {REF} {Length: 1694} {RNA1509_58937} {RNA1310_36718} {RNA815_16626} | |
| 7. | MligTC455_37265 | 26 | 0.54 | Mlig455_051191 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_051191 {REF} {Length: 2131} {NoTransDecoderORF} {RNA1509_14974} {RNA1310_140699} {RNA815_3983} | |
| 8. | MligTC455_13442 | 25 | 0.52 | Mlig455_016258 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_016258 {REF} {Length: 1815} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=22.2} {RNA1509_45595} {RNA1310_43553} {RNA815_31207} | |
| 9. | MligTC455_31248 | 69 | 1.45 | Mlig455_022852 | Neo: Germline |
GABBR2 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_022852 {REF} {Length: 3570} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=161.8]; Receptor family ligand binding region [PF01094.30, score=99.7]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=231, Expect=2e-63]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=228, Expect=1e-62]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=221, Expect=6e-60]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=209, Expect=1e-56]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=131, Expect=5e-34]} {RNA1509_26993} {RNA1310_7927.1} {RNA815_4866.1} |
| 10. | MligTC455_09580 | 19 | 0.4 | Mlig455_010996 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_010996 {REF} {Length: 1464} {NoTransDecoderORF} {RNA1310_106744} {RNA815_31856} | |
| 11. | MligTC455_09986 | 116 | 2.42 | Mlig455_049841 | Neo: - Age: Up-Up-Down |
0.95 | - | - | 0.950 | - | - | - | Mlig455_049841 {REF} {Length: 1272} {RNA1509_29754} {RNA1310_28041.2} {RNA815_15663} |
Berezikov Lab - 2020-2021 © ERIBA