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Results for MligTC455_05557

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05557 49 1.02 Mlig455_054327

Neo: -

Age: -

Region-enriched R4: 4.473/0.00273

 Mlig455_054327 {REF} {Length: 519} {NoTransDecoderORF} {RNA1509_38197} {RNA1310_90831} {RNA815_43533}

Cumulative graph for MligTC455_05557

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 3.408 1.266 0.13241 0.73154
RegionR2 -0.635 1.266 0.74524 1.00000
RegionR3 -0.073 1.266 0.60085 1.00000
RegionR4 4.473 1.266 0.00019 0.00273
RegionR5 -2.24 1.266 0.99995 1.00000
RegionR6 0.278 1.266 0.50278 1.00000
RegionR7 -2.522 1.266 1.00000 1.00000
RegionR8 -2.689 1.266 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.679 1.266 0.29319 0.99098
RegenerationR2 2.694 1.266 0.05195 0.37605
RegenerationR3 -0.013 1.266 0.99200 1.00000
RegenerationR4 -2.34 1.266 0.06716 0.41366
RegenerationR5 3.779 1.266 0.01162 0.19013
RegenerationR6 -2.251 1.266 0.20519 0.54734
RegenerationBL -0.753 1.266 0.99982 1.00000
RegenerationTP 3.192 1.266 0.26305 0.71103


Genes with expression patterns similar to MligTC455_05557

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05557 49 1.02 Mlig455_054327

Neo: -

Age: -

Region-enriched R4: 4.473/0.00273

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_054327 {REF} {Length: 519} {NoTransDecoderORF} {RNA1509_38197} {RNA1310_90831} {RNA815_43533}
2. MligTC455_11470 27 0.57 Mlig455_029491, Mlig455_029511

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.087

 KIAA1958 2.829 0.969 0.958 - - 0.902 -

Mlig455_029491 {REF} {Length: 3807} {RNA1509_9734} {RNA1310_54822} {RNA815_42052}

Mlig455_029511 {REF} {Length: 2220} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=67.7]; SH3 domain [PF17902.3, score=34.1]} {Human: ENSG00000165185, KIAA1958, KIAA1958, [RH, Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000045071, E130308A19Rik, RIKEN cDNA E130308A19 gene, [RH, Score=61.2, Expect=3e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=51.6, Expect=2e-06]} {RNA1509_6477} {RNA1310_54822} {RNA815_2208}
3. MligTC455_22475 51 1.06 Mlig455_039108, Mlig455_041684, Mlig455_041762

Neo: Germline

Age: -

Region-enriched R4: 3.427/0.04994

Regeneration-upregulated R2: 6.065

Regeneration-enriched R2: 6.065

 2.76 0.968 0.910 - - 0.882 -

Mlig455_039108 {REF} {Length: 920} {RNA1509_45173} {RNA1310_56841} {RNA815_31799}

Mlig455_041684 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_45173} {RNA1310_6693.1} {RNA815_19575}

Mlig455_041762 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_45173} {RNA1310_6693.1} {RNA815_19575}
4. MligTC455_35532 243 5.05 Mlig455_011252, Mlig455_011330, Mlig455_037420, Mlig455_069253

Neo: Germline

Age: Down-Up-Down

Region-enriched R4: 5.245/0.00001

 2.742 0.898 0.879 0.965 - - -

Mlig455_011252 {REF} {Length: 309} {TRANSSPLICED} {RNA1509_45029} {RNA1310_91645} {RNA815_40308}

Mlig455_011330 {REF} {Length: 101} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45029} {RNA1310_43775} {RNA815_40308}

Mlig455_037420 {REF} {Length: 902} {RNA1509_45029} {RNA1310_52012.1, RNA1509_45029} {RNA1509_45029, RNA815_40935.1}

Mlig455_069253 {REF} {Length: 944} {RNA1509_45029} {RNA1310_52012.1} {RNA815_40935.1}
5. MligTC455_34062 93 1.95 Mlig455_051516

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=2.827

 2.74 - - 0.988 - 0.815 0.937 Mlig455_051516 {REF} {Length: 13730} {Pfam: SecA DEAD-like domain [PF07517.16, score=86.6]; SecA preprotein cross-linking domain [PF01043.22, score=21.1]} {RNA1310_21331} {RNA815_28500}
6. MligTC455_13613 133 2.77 Mlig455_047175, Mlig455_048504

Neo: Germline

Age: Up-Down-Down

 2.699 0.760 0.943 0.996 - - -

Mlig455_047175 {REF} {Length: 967} {RNA1310_43089} {RNA815_23666}

Mlig455_048504 {REF} {Length: 949} {RNA1310_43089} {RNA815_23666}
7. MligTC455_03999 86 1.8 Mlig455_002026, Mlig455_002117, Mlig455_002223

Neo: Germline

Age: -

 2.642 0.770 0.894 - - 0.978 -

Mlig455_002026 {REF} {Length: 461} {RNA1310_65306}

Mlig455_002117 {REF} {Length: 461} {RNA1310_65306}

Mlig455_002223 {REF} {Length: 925} {RNA1310_65306} {RNA815_64331}
8. MligTC455_03734 28 0.58 Mlig455_006090

Neo: -

Age: -

 2.622 0.818 0.848 - - 0.956 - Mlig455_006090 {REF} {Length: 1406} {Pfam: Methyltransferase domain [PF13383.8, score=64.8]; Methyltransferase FkbM domain [PF05050.14, score=39.6]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=172, Expect=8e-51]} {RNA1310_105941}
9. MligTC455_28838 84 1.75 Mlig455_007557

Neo: -

Age: -

Region-enriched R4: 3.260/0.01289
Region-enriched R5: 2.662/0.02640

 2.593 - - 0.961 0.841 0.791 - Mlig455_007557 {REF} {Length: 745} {RNA1310_66594.1} {RNA815_40011}
10. MligTC455_09903 33 0.68 Mlig455_051109

Neo: Irradiation

Age: Up-Down-Down

 WNT5A 2.592 - 0.701 0.997 - 0.894 - Mlig455_051109 {REF} {Length: 3244} {Pfam: wnt family [PF00110.21, score=260.2]} {Human: ENSG00000114251, WNT5A, Wnt family member 5A, [Score=247, Expect=1e-73]; ENSG00000111186, WNT5B, Wnt family member 5B, [Score=243, Expect=3e-72]} {Mouse: ENSMUSG00000021994, Wnt5a, wingless-type MMTV integration site family, member 5A, [Score=247, Expect=8e-74]; ENSMUSG00000030170, Wnt5b, wingless-type MMTV integration site family, member 5B, [Score=245, Expect=4e-73]} {Dmel: FBgn0010194, Wnt5, Wnt oncogene analog 5, [RH, Score=160, Expect=4e-40]} {Celegans: WBGene00000858, cwn-2, [Score=221, Expect=1e-64]} {Smed: dd_Smed_v6_15469_0_1, dd_Smed_v6_15469_0_1, [Score=243, Expect=9e-73]} {RNA1509_24293} {RNA1310_13535} {RNA815_8371}
11. MligTC455_20811 136 2.84 Mlig455_005487, Mlig455_011154, Mlig455_018680, Mlig455_019673, Mlig455_023197, Mlig455_023371, Mlig455_046095, Mlig455_047141, Mlig455_048093, Mlig455_048094, Mlig455_050866, Mlig455_060179, Mlig455_067093, Mlig455_068651, Mlig455_070401

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.616

 CNBP 2.592 0.762 0.855 0.975 - - -

Mlig455_005487 {REF} {Length: 1033} {Pfam: Integrase core domain [PF00665.28, score=43.8]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=45.8, Expect=8e-07]} {RNA1509_17212} {RNA1310_1773} {RNA815_1548}

Mlig455_011154 {REF} {Length: 2186} {RNA1509_17212} {RNA1310_24779.1} {RNA815_1548}

Mlig455_018680 {REF} {Length: 2072} {Pfam: Integrase core domain [PF00665.28, score=55.0]; Integrase core domain [PF13683.8, score=21.0]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=77.4, Expect=5e-16]} {RNA1509_57524} {RNA1310_29197} {RNA815_56792}

Mlig455_019673 {REF} {Length: 425} {Pfam: Zinc knuckle [PF00098.25, score=28.4]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=46.6, Expect=1e-06]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [Score=46.6, Expect=8e-07]} {RNA1509_57524} {RNA1310_11057.1} {RNA815_18906}

Mlig455_023197 {REF} {Length: 1170} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197} {RNA815_56792}

Mlig455_023371 {REF} {Length: 4285} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Aspartyl protease [PF13650.8, score=25.1]; Zinc knuckle [PF00098.25, score=22.4]} {Celegans: WBGene00019335, K02F6.1, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_10279_0_1, dd_Smed_v6_10279_0_1, [Score=45.4, Expect=1e-05]} {RNA1509_57524} {RNA1310_34097} {RNA815_18906}

Mlig455_046095 {REF} {Length: 1553} {Pfam: Integrase core domain [PF00665.28, score=61.7]; Integrase zinc binding domain [PF17921.3, score=56.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.9, Expect=9e-11]} {RNA1509_17212} {RNA1310_2944} {RNA815_1548}

Mlig455_047141 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_048093 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_048094 {REF} {Length: 900} {RNA1509_57795} {RNA1310_147475} {RNA815_56792}

Mlig455_050866 {REF} {Length: 10660} {Pfam: Zinc knuckle [PF00098.25, score=24.2]} {RNA1509_17212, RNA1509_57524} {RNA1310_1773, RNA1509_57524} {RNA1509_57524, RNA815_1548}

Mlig455_060179 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_067093 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_068651 {REF} {Length: 818} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=85.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=61.3]} {Smed: dd_Smed_v6_21427_0_1, dd_Smed_v6_21427_0_1, [Score=62.0, Expect=1e-12]} {RNA1509_57524} {RNA1310_29197}

Mlig455_070401 {REF} {Length: 2249} {Pfam: Integrase core domain [PF00665.28, score=61.7]; Integrase zinc binding domain [PF17921.3, score=56.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.9, Expect=9e-11]} {RNA1509_17212} {RNA1310_2944} {RNA815_1548}
12. MligTC455_22450 40 0.83 Mlig455_024092, Mlig455_033065

Neo: -

Age: -

 ASIC2, ASIC3 2.591 - - 0.996 - 0.810 0.785

Mlig455_024092 {REF} {Length: 1894} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=190.8]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=58.5, Expect=2e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=56.2, Expect=8e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=107, Expect=4e-24]} {RNA1310_43687}

Mlig455_033065 {REF} {Length: 2669} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.0]} {Human: ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=60.8, Expect=5e-09]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=56.2, Expect=8e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=108, Expect=1e-24]} {RNA1310_43687}
13. MligTC455_03976 126 2.63 Mlig455_017286

Neo: Irradiation

Age: -

Region-specific R4: 6.338

Region-enriched R4: 3.931/0.00045

 2.585 0.717 0.888 0.980 - - - Mlig455_017286 {REF} {Length: 568} {Pfam: RNase H [PF00075.26, score=57.3]} {RNA1509_5045} {RNA1310_667.2} {RNA815_8147}
14. MligTC455_19239 304 6.34 Mlig455_010496, Mlig455_061882

Neo: Germline

Age: -

Region-specific R4: 4.751

Region-enriched R4: 4.107/0.00000

 ZDHHC14 2.539 0.735 0.842 0.962 - - -

Mlig455_010496 {REF} {Length: 1785} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=117.8]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=144, Expect=4e-38]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=142, Expect=7e-38]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=146, Expect=7e-39]; ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=142, Expect=5e-38]} {Dmel: FBgn0260941, app, approximated, [Score=148, Expect=2e-40]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=115, Expect=3e-28]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=131, Expect=3e-34]} {RNA1509_28960} {RNA1310_14626} {RNA815_18781}

Mlig455_061882 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=117.8]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=143, Expect=2e-37]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=140, Expect=3e-37]} {Mouse: ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=145, Expect=3e-38]; ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=140, Expect=2e-37]} {Dmel: FBgn0260941, app, approximated, [Score=146, Expect=1e-39]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [Score=115, Expect=3e-28]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [Score=132, Expect=2e-34]} {RNA1509_28960} {RNA1310_14626, RNA1509_28960} {RNA1509_28960, RNA815_18781}
15. MligTC455_19098 140 2.92 Mlig455_025228, Mlig455_025251

Neo: -

Age: Up-Down-Up

Region-enriched R2: 3.060/0.04934

 DAXX 2.53 - - 0.984 0.763 - 0.783

Mlig455_025228 {REF} {Length: 5839} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=46.0]} {Human: ENSG00000227046, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000206279, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000206206, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000204209, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000231617, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]} {Mouse: ENSMUSG00000002307, Daxx, Fas death domain-associated protein, [Score=84.0, Expect=6e-16]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=68.2, Expect=2e-11]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [Score=56.2, Expect=1e-07]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [RH, Score=222, Expect=1e-63]} {RNA1509_25153} {RNA1310_7064.1} {RNA815_18101}

Mlig455_025251 {REF} {Length: 3683} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.7]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [Score=159, Expect=4e-44]} {RNA1509_60180} {RNA1310_18827} {RNA815_22334}
16. MligTC455_07690 319 6.66 Mlig455_010122, Mlig455_010224

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.539

Region-specific R4: 5.019

Region-enriched R4: 4.446/0.00000

 2.519 0.707 0.834 0.978 - - -

Mlig455_010122 {REF} {Length: 1585} {RNA1509_25591, RNA1509_3284} {RNA1310_12112, RNA1509_25591} {RNA1509_25591, RNA815_12301.2}

Mlig455_010224 {REF} {Length: 1287} {RNA1509_3284} {RNA1310_12112} {RNA815_12301.2}
17. MligTC455_01245 199 4.14 Mlig455_000920

Neo: Germline

Age: -

Region-specific R4: 5.594

Region-enriched R4: 2.687/0.02776

 2.485 0.709 0.815 0.961 - - - Mlig455_000920 {REF} {Length: 448} {RNA1509_34420} {RNA1310_11443} {RNA815_23923}
18. MligTC455_42417 108 2.25 Mlig455_028193

Neo: -

Age: -

 SCNN1A 2.462 - - 0.972 - 0.758 0.732 Mlig455_028193 {REF} {Length: 3768} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=115.2]} {Human: ENSG00000111319, SCNN1A, sodium channel epithelial 1 alpha subunit, [Score=52.8, Expect=6e-07]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=55.1, Expect=5e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=215, Expect=7e-64]} {RNA1310_86143} {RNA815_32816}
19. MligTC455_36116 312 6.5 Mlig455_061645

Neo: Irradiation

Age: Up-Down-Down

 2.442 - - 0.954 0.736 0.752 - Mlig455_061645 {REF} {Length: 4713} {Pfam: Protein of unknown function (DUF2013) [PF09431.12, score=52.8]; SH3 domain [PF00018.30, score=38.1]; Variant SH3 domain [PF14604.8, score=37.3]; Variant SH3 domain [PF07653.19, score=20.7]} {Mouse: ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=49.7, Expect=9e-06]} {Dmel: FBgn0029997, CG2258, [RH, Score=117, Expect=3e-27]} {Smed: dd_Smed_v6_7468_0_1, dd_Smed_v6_7468_0_1, [Score=52.4, Expect=3e-07]} {RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002} {RNA1310_12007.1, RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002} {RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002, RNA815_4274}
20. MligTC455_15214 67 1.4 Mlig455_054254

Neo: Int S/G2/M

Age: Up-Up-Down, logFC(26M/2M)=1.458

Region-enriched R4: 4.867/0.00000

 TPMT 1.945 - 0.954 0.991 - - - Mlig455_054254 {REF} {Length: 1271} {Pfam: Thiopurine S-methyltransferase (TPMT) [PF05724.13, score=80.4]} {Human: ENSG00000137364, TPMT, thiopurine S-methyltransferase, [Score=75.1, Expect=5e-15]} {Mouse: ENSMUSG00000021376, Tpmt, thiopurine methyltransferase, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_1495_0_1, dd_Smed_v6_1495_0_1, [RH, Score=78.2, Expect=1e-16]} {RNA1509_43164} {RNA1310_29080} {RNA815_13368}
21. MligTC455_43663 88 1.83 Mlig455_070157

Neo: -

Age: Up-Down-Up

 1.943 - - 0.995 - 0.948 - Mlig455_070157 {REF} {Length: 2611} {RNA1310_65373} {RNA815_37965}
22. MligTC455_22813 113 2.35 Mlig455_010801

Neo: Germline

Age: -

Region-specific R4: 6.068

Region-enriched R4: 5.065/0.00000

 1.932 - 0.964 0.968 - - - Mlig455_010801 {REF} {Length: 875} {RNA1509_17716} {RNA1310_43674, RNA1509_17716} {RNA1509_17716, RNA815_21234}
23. MligTC455_29680 83 1.72 Mlig455_027716

Neo: -

Age: -

 ANKRD50 1.932 - - 0.995 - 0.937 - Mlig455_027716 {REF} {Length: 7650} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=171.6]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeats (many copies) [PF13857.8, score=108.0]; Ankyrin repeat [PF13606.8, score=106.1]; Ankyrin repeat [PF00023.32, score=94.5]; Mab-21 protein [PF03281.16, score=41.2]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=151, Expect=4e-36]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=151, Expect=4e-36]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=130, Expect=7e-30]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=119, Expect=2e-26]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=125, Expect=1e-28]} {RNA1509_27730, RNA1509_53035} {RNA1310_7057.1, RNA1509_53035} {RNA1509_53035, RNA815_2426.1}
24. MligTC455_09210 80 1.66 Mlig455_020657

Neo: Germline

Age: -

Region-enriched R4: 4.181/0.00003

 1.912 - 0.925 0.987 - - - Mlig455_020657 {REF} {Length: 1090} {RNA1509_48191} {RNA1310_34576} {RNA815_36561}
25. MligTC455_29491 238 4.96 Mlig455_069524

Neo: Irradiation

Age: Up-Up-Down, logFC(26M/2M)=0.351

 1.911 - 0.930 - - 0.981 - Mlig455_069524 {REF} {Length: 3130} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.3]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1310_12293.2, RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1509_17162, RNA1509_41197, RNA1509_54683, RNA815_9107.2}
26. MligTC455_44130 19 0.41 Mlig455_055443

Neo: Germline

Age: -

 1.907 0.922 0.985 - - - - Mlig455_055443 {REF} {Length: 654} {RNA1509_42921} {RNA1310_29530} {RNA815_41809}
27. MligTC455_26366 75 1.56 Mlig455_013893

Neo: -

Age: -

 NSUN7 1.9 - - 0.996 - 0.904 - Mlig455_013893 {REF} {Length: 1904} {Human: ENSG00000179299, NSUN7, NOP2/Sun RNA methyltransferase family member 7, [Score=167, Expect=4e-45]} {Mouse: ENSMUSG00000029206, Nsun7, NOL1/NOP2/Sun domain family, member 7, [Score=164, Expect=3e-44]} {Dmel: FBgn0266099, CG44836, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00013151, nsun-5, Nop2 (NOP2)/SUN domain family member, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_30093_0_1, dd_Smed_v6_30093_0_1, [Score=203, Expect=3e-60]} {RNA1310_17601} {RNA815_32144}
28. MligTC455_21477 150 3.12 Mlig455_016174, Mlig455_044577

Neo: Germline

Age: -

 1.893 - - 0.930 0.963 - -

Mlig455_016174 {REF} {Length: 4984} {TRANSSPLICED} {RNA1509_38742} {RNA1310_4127.1, RNA1509_38742} {RNA1509_38742, RNA815_5630}

Mlig455_044577 {REF} {Length: 465} {TRANSSPLICED} {RNA1509_49243} {RNA1310_4127.1} {RNA815_13953}
29. MligTC455_27103 78 1.63 Mlig455_005338, Mlig455_006418

Neo: -

Age: -

Region-enriched R4: 3.778/0.00120

 1.891 - 0.970 - - 0.921 -

Mlig455_005338 {REF} {Length: 1348} {TRANSSPLICED} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=30.8]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=46.6, Expect=3e-06]} {RNA1509_56237} {RNA1310_26348.2} {RNA815_26049}

Mlig455_006418 {REF} {Length: 3677} {RNA1509_35846} {RNA1310_9600.1} {RNA815_3985.1}
30. MligTC455_52906 97 2.02 Mlig455_064796

Neo: -

Age: -

 1.89 - - 0.975 - 0.915 - Mlig455_064796 {REF} {Length: 1190} {Pfam: Regulator of G protein signalling-like domain [PF09128.13, score=20.3]} {Mouse: ENSMUSG00000006014, Prg4, proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein), [Score=43.9, Expect=1e-05]} {RNA1509_53699} {RNA1310_65460} {RNA815_61504}
31. MligTC455_45492 58 1.21 Mlig455_034276

Neo: -

Age: -

 1.884 - - 0.964 - 0.920 - Mlig455_034276 {REF} {Length: 2718} {RNA1509_59550} {RNA1310_17865.1} {RNA815_34375}
32. MligTC455_29489 117 2.44 Mlig455_018379

Neo: Irradiation

Age: Up-Down-Up, logFC(26M/2M)=-0.551

 1.883 - 0.951 - - 0.932 - Mlig455_018379 {REF} {Length: 3107} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.2]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_59696} {RNA1310_12293.2, RNA1509_59696} {RNA1509_59696, RNA815_9107.2}
33. MligTC455_32078 88 1.83 Mlig455_059989

Neo: -

Age: Up-Down-Down

 SSTR4 1.882 - - 0.994 - 0.888 - Mlig455_059989 {REF} {Length: 7870} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=55.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=20.5]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=57.0, Expect=3e-08]} {RNA1509_17715} {RNA1310_22369} {RNA815_5685.1}
34. MligTC455_34642 348 7.25 Mlig455_027101

Neo: -

Age: -

 ATP2A1 1.88 - - 0.970 - 0.910 - Mlig455_027101 {REF} {Length: 4381} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=191.7]; Cation transporting ATPase, C-terminus [PF00689.23, score=144.6]; Cation transport ATPase (P-type) [PF13246.8, score=76.4]; haloacid dehalogenase-like hydrolase [PF00702.28, score=73.8]; Cation transporter/ATPase, N-terminus [PF00690.28, score=67.0]; haloacid dehalogenase-like hydrolase [PF12710.9, score=30.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=30.2]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1462, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1446, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1403, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1456, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1451, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1407, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1493, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1467, Expect=0.0]} {Smed: dd_Smed_v6_1772_0_1, dd_Smed_v6_1772_0_1, [RH, Score=1614, Expect=0.0]} {RNA1509_20343, RNA1509_42455} {RNA1310_3029.1, RNA1509_42455} {RNA1509_42455, RNA815_2104.2}
35. MligTC455_11625 40 0.82 Mlig455_022146

Neo: -

Age: Up-Down-Down

 1.878 0.916 0.962 - - - - Mlig455_022146 {REF} {Length: 1663} {RNA1310_67073}
36. MligTC455_22749 19 0.4 Mlig455_034189

Neo: -

Age: -

 1.874 0.950 0.924 - - - - Mlig455_034189 {REF} {Length: 1647} {NoTransDecoderORF} {RNA1509_39040} {RNA1310_21199} {RNA815_4579}
37. MligTC455_02301 11 0.24 Mlig455_046401

Neo: -

Age: -

 1.872 0.890 0.982 - - - - Mlig455_046401 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_29315} {RNA1310_81321} {RNA815_47103}
38. MligTC455_16005 97 2.02 Mlig455_018551, Mlig455_019423, Mlig455_058389

Neo: -

Age: -

 1.871 - - 0.998 - 0.873 -

Mlig455_018551 {REF} {Length: 3430} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}

Mlig455_019423 {REF} {Length: 2545} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}

Mlig455_058389 {REF} {Length: 3494} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}
39. MligTC455_01736 13 0.26 Mlig455_019529

Neo: Germline

Age: -

 1.868 0.962 0.906 - - - - Mlig455_019529 {REF} {Length: 783} {NoTransDecoderORF} {RNA1509_59356} {RNA1310_86605} {RNA815_64798}
40. MligTC455_14616 35 0.73 Mlig455_036136

Neo: Germline

Age: -

 1.868 0.912 0.956 - - - - Mlig455_036136 {REF} {Length: 779} {RNA1310_76865}
41. MligTC455_16515 328 6.84 Mlig455_025215

Neo: -

Age: Up-Down-Up

Region-specific R4: 3.768

Region-enriched R3: 2.309/0.00099
Region-enriched R4: 1.811/0.02291

 1.862 - 0.890 0.972 - - - Mlig455_025215 {REF} {Length: 1677} {Pfam: N-formylglutamate amidohydrolase [PF05013.14, score=35.8]} {RNA1509_20433} {RNA1310_23627.3} {RNA815_15550}
42. MligTC455_19108 277 5.78 Mlig455_002320

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.754/0.03282
Region-enriched R5: 1.455/0.01966

 PSMC3IP 1.861 - - 0.982 0.879 - - Mlig455_002320 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.3]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]; Filament-like plant protein, long coiled-coil [PF05911.13, score=21.4]; Penicillinase repressor [PF03965.18, score=19.7]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=130, Expect=4e-37]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=147, Expect=9e-44]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=138, Expect=1e-40]} {RNA1509_18951, RNA1509_36312} {RNA1310_38683, RNA1509_18951, RNA1509_36312} {RNA1509_18951, RNA1509_36312, RNA815_16821}
43. MligTC455_45564 117 2.43 Mlig455_006872

Neo: -

Age: logFC(26M/2M)=-2.025

Region-enriched R6: 3.967/0.00318

 ARF3 1.859 - - 0.969 - 0.890 - Mlig455_006872 {REF} {Length: 1935} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939, RNA1509_57358} {RNA1509_57358, RNA815_20725}
44. MligTC455_47898 18 0.38 Mlig455_000079

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.674

 1.857 0.869 0.988 - - - - Mlig455_000079 {REF} {Length: 2941} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.2]} {RNA1509_16596} {RNA1310_58467} {RNA815_45213}
45. MligTC455_52874 382 7.96 Mlig455_026014, Mlig455_070442

Neo: -

Age: -

 CDH23 1.855 - - 0.901 - 0.954 -

Mlig455_026014 {REF} {Length: 10931} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=362.8]; Cadherin-like [PF16184.7, score=40.0]; Cadherin-like [PF08266.14, score=32.1]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=327, Expect=4e-90]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=327, Expect=2e-90]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=404, Expect=8e-116]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=211, Expect=1e-54]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=498, Expect=9e-149]} {RNA1509_48951} {RNA1310_475.1} {RNA815_321.1}

Mlig455_070442 {REF} {Length: 10801} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=364.1]; Cadherin-like [PF16184.7, score=39.7]; Cadherin-like [PF08266.14, score=30.9]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=323, Expect=4e-89]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=326, Expect=4e-90]} {Dmel: FBgn0038247, Cad88C, Cadherin 88C, [Score=404, Expect=8e-116]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=211, Expect=1e-54]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=495, Expect=1e-147]} {RNA1509_44393, RNA1509_48951} {RNA1310_475.1, RNA1509_44393} {RNA1509_44393, RNA815_321.1}
46. MligTC455_54111 330 6.87 Mlig455_031536

Neo: Int S/G2/M

Age: Down-Up-Down

Region-specific R4: 4.175

Region-enriched R4: 4.555/0.00000

 CHMP1B 1.853 - 0.896 0.957 - - - Mlig455_031536 {REF} {Length: 841} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=58.4]} {Human: ENSG00000255112, CHMP1B, charged multivesicular body protein 1B, [Score=211, Expect=3e-69]} {Mouse: ENSMUSG00000031242, 2610002M06Rik, RIKEN cDNA 2610002M06 gene, [Score=211, Expect=1e-69]; ENSMUSG00000109901, Chmp1b, charged multivesicular body protein 1B, [Score=209, Expect=8e-69]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=232, Expect=7e-78]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=225, Expect=3e-75]} {Smed: dd_Smed_v6_630_0_1, dd_Smed_v6_630_0_1, [Score=236, Expect=1e-79]} {RNA1509_28724} {RNA1310_41507, RNA1509_28724} {RNA1509_28724, RNA815_20010.2}
47. MligTC455_17997 249 5.18 Mlig455_031355

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.965

Regeneration-downregulated R6: -3.161

Regeneration-depleted R6: -3.161

 ANK2 1.852 - - 0.896 - 0.956 - Mlig455_031355 {REF} {Length: 3392} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=225.1]; Ankyrin repeats (many copies) [PF13637.8, score=151.6]; Ankyrin repeat [PF00023.32, score=151.0]; Ankyrin repeat [PF13606.8, score=136.9]; Ankyrin repeats (many copies) [PF13857.8, score=128.5]; Caspase domain [PF00656.24, score=64.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=117, Expect=3e-26]; ENSG00000151150, ANK3, ankyrin 3, [Score=113, Expect=7e-25]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=127, Expect=2e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=130, Expect=1e-30]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=1e-27]} {Smed: dd_Smed_v6_2072_0_24, dd_Smed_v6_2072_0_24, [Score=115, Expect=5e-26]} {RNA1509_59314, RNA1509_6998} {RNA1310_4219, RNA1509_59314, RNA1509_6998} {RNA1509_59314, RNA1509_6998, RNA815_1303}
48. MligTC455_53599 81 1.69 Mlig455_056767

Neo: -

Age: logFC(26M/2M)=-0.511

Region-specific R4: 4.543

Region-enriched R4: 5.690/0.00002

Regeneration-depleted R4: -5.872
Regeneration-depleted R3: -5.428

 1.85 - 0.968 0.882 - - - Mlig455_056767 {REF} {Length: 1673} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=181.1]} {Celegans: WBGene00002135, inx-13, Innexin, [Score=128, Expect=3e-33]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=160, Expect=2e-44]} {RNA1310_16867} {RNA815_25839}
49. MligTC455_00915 4 0.09 Mlig455_032896

Neo: -

Age: -

 1.848 0.886 0.962 - - - - Mlig455_032896 {REF} {Length: 525} {NoTransDecoderORF} {RNA1509_36146} {RNA1310_101784} {RNA815_48411}
50. MligTC455_12405 12 0.25 Mlig455_052412, Mlig455_060453

Neo: -

Age: -

 1.847 - - - - 0.959 0.888

Mlig455_052412 {REF} {Length: 897} {Smed: dd_Smed_v6_38541_0_1, dd_Smed_v6_38541_0_1, [Score=63.5, Expect=4e-12]} {RNA1310_37660} {RNA815_17816.1}

Mlig455_060453 {REF} {Length: 900} {Pfam: PAN domain [PF00024.28, score=19.1]} {Smed: dd_Smed_v6_38541_0_1, dd_Smed_v6_38541_0_1, [RH, Score=71.2, Expect=8e-15]} {RNA1310_37660} {RNA815_17816.1}
51. MligTC455_17129 350 7.3 Mlig455_052972

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.755

Region-enriched R4: 4.012/0.00000

 1.846 - 0.885 0.961 - - - Mlig455_052972 {REF} {Length: 4935} {RNA1509_54560} {RNA1310_4256} {RNA815_2602}
52. MligTC455_32959 420 8.75 Mlig455_017533, Mlig455_026822

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 2.461/0.00739

 ELF4 1.846 - 0.852 0.994 - - -

Mlig455_017533 {REF} {Length: 4604} {Pfam: Ets-domain [PF00178.24, score=49.1]} {Human: ENSG00000102034, ELF4, E74 like ETS transcription factor 4, [Score=59.3, Expect=3e-08]; ENSG00000109381, ELF2, E74 like ETS transcription factor 2, [Score=57.4, Expect=1e-07]} {Mouse: ENSMUSG00000037174, Elf2, E74-like factor 2, [Score=61.6, Expect=5e-09]} {Smed: dd_Smed_v6_7247_0_1, dd_Smed_v6_7247_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_17091, RNA1509_29830} {RNA1310_1652, RNA1509_29830} {RNA1509_29830, RNA815_1367}

Mlig455_026822 {REF} {Length: 4556} {Pfam: Ets-domain [PF00178.24, score=49.2]} {Human: ENSG00000102034, ELF4, E74 like ETS transcription factor 4, [Score=59.3, Expect=3e-08]; ENSG00000109381, ELF2, E74 like ETS transcription factor 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000037174, Elf2, E74-like factor 2, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_7247_0_1, dd_Smed_v6_7247_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_17091, RNA1509_59324} {RNA1310_1652, RNA1509_17091, RNA1509_59324} {RNA1509_17091, RNA1509_59324, RNA815_1367}
53. MligTC455_15330 373 7.77 Mlig455_020220

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.289

 1.844 - - 0.969 - 0.875 - Mlig455_020220 {REF} {Length: 2115} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=41.4]} {Smed: dd_Smed_v6_4798_0_1, dd_Smed_v6_4798_0_1, [RH, Score=82.0, Expect=3e-20]} {RNA1509_28885, RNA1509_54654} {RNA1310_42962.2, RNA1509_28885, RNA1509_54654} {RNA1509_28885, RNA1509_54654, RNA815_23071}
54. MligTC455_04411 123 2.56 Mlig455_053007

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.470

Region-enriched R4: 5.651/0.00001

 1.843 - 0.875 0.968 - - - Mlig455_053007 {REF} {Length: 431} {NoTransDecoderORF} {RNA1509_17891} {RNA1310_11863} {RNA815_4614.2}
55. MligTC455_34644 50 1.04 Mlig455_063653

Neo: -

Age: -

 1.837 - - 0.962 - 0.875 - Mlig455_063653 {REF} {Length: 1994} {RNA1509_28247} {RNA1310_21726.1} {RNA815_14540}
56. MligTC455_38404 102 2.12 Mlig455_060454

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.330/0.00511

 1.833 - 0.856 0.977 - - - Mlig455_060454 {REF} {Length: 4712} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=110.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=108.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.0]; Integrase zinc binding domain [PF17921.3, score=60.5]; Integrase core domain [PF00665.28, score=54.3]; H2C2 zinc finger [PF09337.12, score=29.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.1]; Retrotransposon gag protein [PF03732.19, score=20.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=2e-75]} {RNA1509_19088} {RNA1310_807} {RNA815_13859}
57. MligTC455_04410 290 6.04 Mlig455_036793, Mlig455_036799

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.988

Region-enriched R4: 6.177/0.00000

 SLC7A2 1.832 - 0.875 0.957 - - -

Mlig455_036793 {REF} {Length: 2106} {Pfam: Amino acid permease [PF13520.8, score=130.0]; Amino acid permease [PF00324.23, score=101.8]; C-terminus of AA_permease [PF13906.8, score=52.6]} {Human: ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=284, Expect=2e-86]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=280, Expect=2e-85]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=290, Expect=5e-89]} {Dmel: FBgn0036984, CG13248, [Score=307, Expect=2e-95]} {Celegans: WBGene00016806, C50D2.2, [Score=311, Expect=3e-98]} {Smed: dd_Smed_v6_8652_0_7, dd_Smed_v6_8652_0_7, [Score=417, Expect=2e-139]} {RNA1509_17891} {RNA1310_11863} {RNA815_4614.1}

Mlig455_036799 {REF} {Length: 2152} {Pfam: Amino acid permease [PF13520.8, score=128.8]; Amino acid permease [PF00324.23, score=102.1]; C-terminus of AA_permease [PF13906.8, score=52.6]} {Human: ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=281, Expect=2e-85]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=277, Expect=3e-84]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=286, Expect=6e-88]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [Score=273, Expect=4e-82]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [Score=273, Expect=4e-82]} {Dmel: FBgn0036984, CG13248, [Score=306, Expect=4e-95]} {Celegans: WBGene00016806, C50D2.2, [Score=311, Expect=6e-98]} {Smed: dd_Smed_v6_8652_0_1, dd_Smed_v6_8652_0_1, [Score=416, Expect=5e-139]} {RNA1509_17891} {RNA1310_11863, RNA1509_17891} {RNA1509_17891, RNA815_4614.1}
58. MligTC455_08528 31 0.66 Mlig455_014271

Neo: -

Age: -

 1.83 - - - - 0.955 0.875 Mlig455_014271 {REF} {Length: 744} {NoTransDecoderORF} {RNA1509_8600} {RNA1310_31185} {RNA815_4566}
59. MligTC455_36792 641 13.36 Mlig455_040816, Mlig455_040917, Mlig455_049184

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.297

Region-specific R4: 6.507

Region-enriched R4: 5.509/0.00000

 ADAM17 1.827 - 0.849 0.978 - - -

Mlig455_040816 {REF} {Length: 3099} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=77.4]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=62.9]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=37.9]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=21.6]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=21.2]; Reprolysin family propeptide [PF01562.21, score=20.4]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [Score=260, Expect=3e-75]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [Score=257, Expect=4e-74]} {Dmel: FBgn0039734, Tace, [Score=270, Expect=8e-80]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [Score=183, Expect=6e-49]} {Smed: dd_Smed_v6_10958_0_1, dd_Smed_v6_10958_0_1, [Score=55.8, Expect=5e-08]} {RNA1509_17096, RNA1509_45736} {RNA1310_6968, RNA1509_17096, RNA1509_45736} {RNA1509_17096, RNA1509_45736, RNA815_7112.1}

Mlig455_040917 {REF} {Length: 3504} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=77.1]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=62.7]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=37.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=21.4]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=20.7]; Reprolysin family propeptide [PF01562.21, score=20.2]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [Score=266, Expect=1e-76]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [Score=258, Expect=3e-74]} {Dmel: FBgn0039734, Tace, [Score=271, Expect=6e-80]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [Score=185, Expect=3e-49]} {Smed: dd_Smed_v6_10958_0_1, dd_Smed_v6_10958_0_1, [Score=56.2, Expect=5e-08]} {RNA1509_17096} {RNA1310_6968} {RNA815_7112.1}

Mlig455_049184 {REF} {Length: 2606} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=77.3]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=62.8]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=30.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=21.6]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=21.3]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [Score=217, Expect=8e-60]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [Score=211, Expect=7e-58]} {Dmel: FBgn0039734, Tace, [Score=223, Expect=9e-63]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [Score=137, Expect=1e-33]} {RNA1509_45736} {RNA1310_6968} {RNA815_7112.1}
60. MligTC455_38403 118 2.45 Mlig455_011987

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.147

Region-enriched R4: 3.588/0.01930

 1.824 - 0.860 0.964 - - - Mlig455_011987 {REF} {Length: 3789} {Pfam: Retrotransposon gag protein [PF03732.19, score=23.1]} {RNA1509_19088, RNA1509_38918} {RNA1310_807, RNA1509_19088, RNA1509_38918} {RNA1509_19088, RNA1509_38918, RNA815_13859}
61. MligTC455_21906 495 10.3 Mlig455_021936, Mlig455_037810, Mlig455_057100

Neo: Germline

Age: -

Region-specific R4: 5.284

Region-enriched R4: 4.898/0.00000

 1.823 - 0.850 0.973 - - -

Mlig455_021936 {REF} {Length: 664} {NoTransDecoderORF} {RNA1509_49754} {RNA1310_50896} {RNA815_10763.1}

Mlig455_037810 {REF} {Length: 525} {NoTransDecoderORF} {RNA1509_49754} {RNA1310_50896} {RNA815_10763.1}

Mlig455_057100 {REF} {Length: 2496} {tRNA: Gly(TCC), score=66.7} {Pfam: THAP domain [PF05485.14, score=30.3]} {RNA1509_32664} {RNA1310_23016.1} {RNA815_21719}
62. MligTC455_33674 265 5.53 Mlig455_053685

Neo: -

Age: Down-Up-Up

Regeneration-upregulated R2: 3.790

Regeneration-enriched R2: 3.790

 1.823 - - 0.994 - 0.829 - Mlig455_053685 {REF} {Length: 2654} {Pfam: Translocon-associated protein (TRAP), alpha subunit [PF03896.18, score=18.7]} {RNA1509_8786} {RNA1310_54930} {RNA815_14838.2}
63. MligTC455_23039 94 1.97 Mlig455_034102

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R8: 4.364/0.01868

 PKDREJ 1.822 - 0.833 - - 0.989 - Mlig455_034102 {REF} {Length: 7975} {Pfam: Polycystin cation channel [PF08016.14, score=156.8]; Ion transport protein [PF00520.33, score=37.1]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=104, Expect=5e-22]; ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=142, Expect=7e-34]} {Dmel: FBgn0036712, brv2, brivido-2, [Score=58.2, Expect=3e-08]} {Smed: dd_Smed_v6_12955_0_1, dd_Smed_v6_12955_0_1, [Score=127, Expect=6e-30]} {RNA1509_58618} {RNA1310_1849} {RNA815_2535}
64. MligTC455_25812 94 1.95 Mlig455_017558, Mlig455_030840, Mlig455_034038

Neo: -

Age: -

Region-enriched R4: 4.081/0.00065

 PRR9 1.821 0.825 - 0.996 - - -

Mlig455_017558 {REF} {Length: 1682} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=39.1]; Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeat [PF00023.32, score=32.2]; Ankyrin repeat [PF13606.8, score=24.4]} {RNA1509_6491} {RNA1310_37126} {RNA815_33363.1}

Mlig455_030840 {REF} {Length: 1690} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=39.1]; Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeat [PF00023.32, score=32.2]; Ankyrin repeat [PF13606.8, score=24.4]} {RNA1509_6491} {RNA1310_62840} {RNA815_33363.1}

Mlig455_034038 {REF} {Length: 260} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=41.6, Expect=1e-05]}
65. MligTC455_14340 69 1.44 Mlig455_043719, Mlig455_043806

Neo: -

Age: -

 PLAT 1.819 - 0.842 - - 0.977 -

Mlig455_043719 {REF} {Length: 4752} {Pfam: Kringle domain [PF00051.20, score=51.5]} {Human: ENSG00000104368, PLAT, plasminogen activator, tissue type, [Score=57.0, Expect=9e-08]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=51.6, Expect=3e-06]; ENSMUSG00000059481, Plg, plasminogen, [Score=51.2, Expect=6e-06]; ENSMUSG00000031538, Plat, plasminogen activator, tissue, [Score=50.4, Expect=7e-06]} {Dmel: FBgn0010407, Ror, [Score=51.6, Expect=3e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=50.1, Expect=8e-06]} {RNA1509_21873} {RNA1310_6714.1} {RNA815_2006.1}

Mlig455_043806 {REF} {Length: 5127} {Pfam: Kringle domain [PF00051.20, score=51.5]} {Human: ENSG00000104368, PLAT, plasminogen activator, tissue type, [Score=57.0, Expect=9e-08]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=51.6, Expect=3e-06]; ENSMUSG00000059481, Plg, plasminogen, [Score=51.2, Expect=6e-06]; ENSMUSG00000031538, Plat, plasminogen activator, tissue, [Score=50.4, Expect=7e-06]} {Dmel: FBgn0010407, Ror, [Score=51.6, Expect=3e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=50.1, Expect=8e-06]} {RNA1509_21873} {RNA1310_6714.1} {RNA815_2006.1}
66. MligTC455_31798 11 0.23 Mlig455_026279

Neo: -

Age: -

 CABP1 1.818 0.852 0.966 - - - - Mlig455_026279 {REF} {Length: 3246} {TRANSSPLICED} {Pfam: EF hand [PF13202.8, score=72.6]; EF hand [PF00036.34, score=71.8]; EF-hand domain [PF13405.8, score=68.5]; EF-hand domain pair [PF13833.8, score=64.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=64.4]; EF-hand domain pair [PF13499.8, score=62.6]; Dockerin type I domain [PF00404.20, score=21.7]} {Human: ENSG00000157782, CABP1, calcium binding protein 1, [Score=80.1, Expect=1e-15]} {Mouse: ENSMUSG00000029544, Cabp1, calcium binding protein 1, [Score=80.5, Expect=1e-15]} {Celegans: WBGene00018376, F43C9.2, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=75.9, Expect=6e-16]} {RNA1509_23300} {RNA1310_33044} {RNA815_18772}
67. MligTC455_24527 9 0.18 Mlig455_034489

Neo: Int S/G2/M

Age: -

 KCTD1 1.816 0.964 0.852 - - - - Mlig455_034489 {REF} {Length: 4655} {Pfam: Phage integrase family [PF00589.24, score=37.1]; Domain of unknown function (DUF3504) [PF12012.10, score=22.1]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=57.8, Expect=1e-08]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}
68. MligTC455_15143 70 1.45 Mlig455_041779

Neo: Germline

Age: logFC(26M/2M)=0.568

Region-enriched R4: 3.580/0.02674

 1.812 0.845 0.967 - - - - Mlig455_041779 {REF} {Length: 1098} {RNA1310_40058} {RNA815_19245}
69. MligTC455_47639 256 5.34 Mlig455_046133

Neo: -

Age: -

 USF2 1.811 - - 0.976 - 0.835 - Mlig455_046133 {REF} {Length: 1681} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.4]} {Human: ENSG00000105698, USF2, upstream transcription factor 2, c-fos interacting, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000058239, Usf2, upstream transcription factor 2, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0029711, Usf, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [RH, Score=55.5, Expect=2e-08]} {RNA1509_24437} {RNA1310_26406} {RNA815_7684}
70. MligTC455_08635 33 0.69 Mlig455_041022, Mlig455_041189

Neo: -

Age: -

 1.806 - - - 0.967 0.839 -

Mlig455_041022 {REF} {Length: 1305} {RNA1509_53357} {RNA1310_12881} {RNA815_27630}

Mlig455_041189 {REF} {Length: 1255} {RNA1509_53357} {RNA1310_12881} {RNA815_27630}
71. MligTC455_23034 523 10.9 Mlig455_052531, Mlig455_069097

Neo: Germline

Age: Up-Down-Down

 1.806 - 0.817 0.989 - - -

Mlig455_052531 {REF} {Length: 2226} {RNA1509_16734, RNA1509_18187, RNA1509_33695} {RNA1310_372, RNA1509_16734, RNA1509_18187, RNA1509_33695} {RNA1509_16734, RNA1509_18187, RNA1509_33695, RNA815_8220.1}

Mlig455_069097 {REF} {Length: 1866} {RNA1509_16734} {RNA1310_372} {RNA815_8220.1}
72. MligTC455_03005 58 1.21 Mlig455_004257, Mlig455_004306

Neo: Germline

Age: -

 1.804 0.833 0.971 - - - -

Mlig455_004257 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}

Mlig455_004306 {REF} {Length: 257} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}
73. MligTC455_25238 52 1.09 Mlig455_052159, Mlig455_060707

Neo: -

Age: -

 1.802 - - 0.991 - - 0.811

Mlig455_052159 {REF} {Length: 888} {RNA1310_46257} {RNA815_22978}

Mlig455_060707 {REF} {Length: 2582} {RNA1310_46257} {RNA815_22978}
74. MligTC455_30051 18 0.38 Mlig455_010151

Neo: -

Age: -

 1.8 - 0.846 - - 0.954 - Mlig455_010151 {REF} {Length: 2317} {Pfam: Integrase zinc binding domain [PF17921.3, score=74.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=52.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=28.9]; H2C2 zinc finger [PF09337.12, score=27.8]; Integrase core domain [PF00665.28, score=27.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=119, Expect=4e-28]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}
75. MligTC455_53819 234 4.88 Mlig455_029142, Mlig455_032108

Neo: -

Age: -

 1.8 - - 0.963 - 0.837 -

Mlig455_029142 {REF} {Length: 262} {NoTransDecoderORF} {RNA1310_91707} {RNA815_47119}

Mlig455_032108 {REF} {Length: 1704} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_88113} {RNA815_47119}
76. MligTC455_41463 55 1.14 Mlig455_016088

Neo: Int S/G2/M

Age: -

 1.798 - - 0.996 - - 0.802 Mlig455_016088 {REF} {Length: 667} {NoTransDecoderORF}
77. MligTC455_44681 11 0.23 Mlig455_057725

Neo: -

Age: Up-Down-Down

 1.798 0.956 0.842 - - - - Mlig455_057725 {REF} {Length: 2691} {Pfam: Tetraspanin family [PF00335.22, score=37.2]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=47.4, Expect=6e-06]} {RNA1509_50258} {RNA1310_36136} {RNA815_18097}
78. MligTC455_51957 427 8.9 Mlig455_001616

Neo: -

Age: logFC(26M/2M)=0.792

 LCK 1.797 - - 0.950 0.847 - - Mlig455_001616 {REF} {Length: 2834} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=195.1]; Protein kinase domain [PF00069.27, score=130.1]; Variant SH3 domain [PF14604.8, score=43.0]; SH2 domain [PF00017.26, score=42.8]; Variant SH3 domain [PF07653.19, score=36.6]; SH3 domain [PF00018.30, score=35.8]; ABC1 atypical kinase-like domain [PF03109.18, score=28.0]} {Human: ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=251, Expect=7e-78]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=250, Expect=5e-77]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=241, Expect=1e-73]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=255, Expect=4e-79]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=243, Expect=7e-75]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=239, Expect=4e-73]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=213, Expect=5e-64]} {Smed: dd_Smed_v6_3363_0_2, dd_Smed_v6_3363_0_2, [Score=304, Expect=6e-99]} {RNA1509_10615, RNA1509_47356} {RNA1310_9006.1, RNA1509_47356} {RNA1509_47356, RNA815_3005.1}
79. MligTC455_17441 203 4.23 Mlig455_043730, Mlig455_043821, Mlig455_047428

Neo: Germline

Age: -

Region-enriched R5: 3.909/0.00034
Region-enriched R4: 3.477/0.00542

 RPA1 1.794 - - - 0.958 0.836 -

Mlig455_043730 {REF} {Length: 2711} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=73.8]; OB-fold nucleic acid binding domain [PF01336.27, score=51.7]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.8]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=291, Expect=3e-89]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=276, Expect=1e-83]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=249, Expect=7e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=270, Expect=1e-82]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755}

Mlig455_043821 {REF} {Length: 2624} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=73.8]; OB-fold nucleic acid binding domain [PF01336.27, score=52.1]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.4]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=292, Expect=7e-90]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=277, Expect=4e-84]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=248, Expect=9e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=273, Expect=1e-83]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755}

Mlig455_047428 {REF} {Length: 2693} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=131.0]; Replication protein A OB domain [PF16900.7, score=74.5]; OB-fold nucleic acid binding domain [PF01336.27, score=51.3]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=32.8]; Cell division control protein 24, OB domain 3 [PF17244.4, score=27.3]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=291, Expect=2e-89]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=276, Expect=7e-84]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=250, Expect=3e-74]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=269, Expect=3e-82]} {RNA1509_50209} {RNA1310_12384} {RNA815_25755}
80. MligTC455_33432 59 1.23 Mlig455_047130, Mlig455_049075

Neo: -

Age: -

 1.792 - - 0.988 - 0.804 -

Mlig455_047130 {REF} {Length: 683} {Pfam: Protein of unknown function (FYDLN_acid) [PF09538.12, score=19.5]} {RNA1509_52826} {RNA1310_267.1} {RNA815_381.1}

Mlig455_049075 {REF} {Length: 2317} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}
81. MligTC455_07817 87 1.81 Mlig455_008042

Neo: Germline

Age: -

 1.792 0.820 0.972 - - - - Mlig455_008042 {REF} {Length: 1040} {RNA1509_56901} {RNA1310_38278} {RNA815_20254}
82. MligTC455_27923 318 6.64 Mlig455_037735

Neo: -

Age: -

 1.791 - - 0.956 0.835 - - Mlig455_037735 {REF} {Length: 2740} {Pfam: Noggin [PF05806.14, score=33.9]} {Smed: dd_Smed_v6_7999_0_1, dd_Smed_v6_7999_0_1, [Score=77.4, Expect=1e-16]} {RNA1509_58515} {RNA1310_28925, RNA1509_58515} {RNA1509_58515, RNA815_419.1}
83. MligTC455_16004 112 2.34 Mlig455_018566

Neo: -

Age: -

 1.788 - - 0.974 - 0.814 - Mlig455_018566 {REF} {Length: 1614} {RNA1310_59905} {RNA815_19359}
84. MligTC455_20788 562 11.71 Mlig455_023481

Neo: -

Age: logFC(26M/2M)=0.284

 UBE2J1 1.786 - - 0.957 0.829 - - Mlig455_023481 {REF} {Length: 3141} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=65.4]} {Human: ENSG00000198833, UBE2J1, ubiquitin conjugating enzyme E2 J1, [RH, Score=258, Expect=3e-84]} {Mouse: ENSMUSG00000028277, Ube2j1, ubiquitin-conjugating enzyme E2J 1, [RH, Score=261, Expect=1e-85]} {Dmel: FBgn0038515, CG5823, [Score=126, Expect=8e-34]} {Celegans: WBGene00006703, ubc-6, UBiquitin Conjugating enzyme, [RH, Score=263, Expect=1e-86]} {Smed: dd_Smed_v6_2788_0_1, dd_Smed_v6_2788_0_1, [RH, Score=304, Expect=1e-101]} {RNA1509_11687} {RNA1310_24163, RNA1509_11687} {RNA1509_11687, RNA815_16666}
85. MligTC455_40428 47 0.98 Mlig455_017180

Neo: Irradiation

Age: -

Region-enriched R4: 5.668/0.00000

 1.785 - 0.787 0.998 - - - Mlig455_017180 {REF} {Length: 3254} {RNA1509_22767, RNA1509_52352} {RNA1310_22898.1, RNA1509_22767} {RNA1509_22767, RNA815_40500}
86. MligTC455_37741 69 1.44 Mlig455_059307, Mlig455_065197

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.851

Region-enriched R2: 6.435/0.04973
Region-enriched R7: 4.757/0.02458

Regeneration-upregulated R3: 7.677

Regeneration-enriched R3: 7.677

 1.785 - 0.821 - - 0.964 -

Mlig455_059307 {REF} {Length: 1198} {RNA1509_35604} {RNA1310_34182} {RNA815_12032.1}

Mlig455_065197 {REF} {Length: 1481} {RNA1509_35604} {RNA1310_34182, RNA1509_35604} {RNA1509_35604, RNA815_12032.1}
87. MligTC455_01246 433 9.02 Mlig455_000912, Mlig455_000919, Mlig455_029916

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.269

Region-specific R4: 4.967

Region-enriched R4: 3.010/0.00040

Regeneration-downregulated R4: -2.996

Regeneration-depleted R4: -2.996

 1.784 - 0.822 0.962 - - -

Mlig455_000912 {REF} {Length: 3352} {Pfam: Tetraspanin family [PF00335.22, score=28.5]} {RNA1509_17717, RNA1509_34420, RNA1509_44851} {RNA1310_11443, RNA1509_17717, RNA1509_34420, RNA1509_44851} {RNA1509_17717, RNA1509_34420, RNA1509_44851, RNA815_14918}

Mlig455_000919 {REF} {Length: 639} {RNA1509_17717} {RNA1310_44277} {RNA815_23923}

Mlig455_029916 {REF} {Length: 3225} {Pfam: Tetraspanin family [PF00335.22, score=28.5]} {RNA1509_34420} {RNA1310_11443} {RNA815_14918}
88. MligTC455_29705 84 1.74 Mlig455_068931

Neo: -

Age: -

 1.782 - - 0.977 - - 0.805 Mlig455_068931 {REF} {Length: 4351} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=210.9]; PIF1-like helicase [PF05970.16, score=107.2]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=62.8, Expect=1e-09]} {Celegans: WBGene00019136, F59H6.5, [Score=468, Expect=8e-144]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [RH, Score=125, Expect=9e-34]} {RNA1509_53692} {RNA1310_981} {RNA815_15863}
89. MligTC455_08219 7 0.14 Mlig455_049440

Neo: -

Age: -

 1.78 0.827 0.953 - - - - Mlig455_049440 {REF} {Length: 172} {NoTransDecoderORF}
90. MligTC455_09570 62 1.29 Mlig455_063879

Neo: -

Age: -

Region-specific R4: 7.248

Region-enriched R4: 5.809/0.00103

 1.778 - 0.964 - 0.814 - - Mlig455_063879 {REF} {Length: 629} {NoTransDecoderORF} {RNA1310_71536} {RNA815_39466}
91. MligTC455_39360 427 8.9 Mlig455_047425

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.530

 HEATR1 1.778 - - 0.988 0.790 - - Mlig455_047425 {REF} {Length: 6031} {TRANSSPLICED} {Pfam: U3 small nucleolar RNA-associated protein 10 [PF12397.10, score=23.7]} {Human: ENSG00000119285, HEATR1, HEAT repeat containing 1, [Score=103, Expect=2e-21]} {Mouse: ENSMUSG00000050244, Heatr1, HEAT repeat containing 1, [RH, Score=91.7, Expect=4e-18]} {RNA1509_2547, RNA1509_58129} {RNA1310_1787.1, RNA1509_58129} {RNA1509_58129, RNA815_4052}
92. MligTC455_12846 29 0.6 Mlig455_064694

Neo: -

Age: -

 1.777 - - - 0.804 0.973 - Mlig455_064694 {REF} {Length: 967} {NoTransDecoderORF} {RNA1310_110650}
93. MligTC455_24786 300 6.25 Mlig455_032143, Mlig455_049302

Neo: -

Age: logFC(26M/2M)=-0.528

 1.776 - - 0.981 - 0.795 -

Mlig455_032143 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_36687} {RNA1310_1894} {RNA815_5614.1}

Mlig455_049302 {REF} {Length: 3378} {Pfam: PT repeat [PF04886.14, score=51.8]} {RNA1509_45844} {RNA1310_12902.2} {RNA815_515.1}
94. MligTC455_49995 385 8.03 Mlig455_042998

Neo: -

Age: -

 SFXN1 1.775 - - 0.991 - 0.784 - Mlig455_042998 {REF} {Length: 2744} {TRANSSPLICED} {Pfam: Sideroflexins [PF03820.19, score=459.6]} {Human: ENSG00000164466, SFXN1, sideroflexin 1, [RH, Score=400, Expect=2e-140]; ENSG00000107819, SFXN3, sideroflexin 3, [RH, Score=396, Expect=1e-138]} {Mouse: ENSMUSG00000021474, Sfxn1, sideroflexin 1, [RH, Score=397, Expect=4e-139]; ENSMUSG00000025212, Sfxn3, sideroflexin 3, [RH, Score=396, Expect=6e-139]} {Dmel: FBgn0037239, Sfxn1-3, Sideroflexin 1/3, [RH, Score=383, Expect=6e-134]} {Celegans: WBGene00009513, sfxn-1.2, Sideroflexin, [RH, Score=320, Expect=8e-109]} {Smed: dd_Smed_v6_12292_0_1, dd_Smed_v6_12292_0_1, [RH, Score=426, Expect=6e-151]} {RNA1509_8393} {RNA1310_25049} {RNA815_11152.1}
95. MligTC455_38051 101 2.1 Mlig455_051338

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.462/0.00051

 1.773 - 0.789 0.984 - - - Mlig455_051338 {REF} {Length: 2372} {RNA1509_12007} {RNA1310_12015.1} {RNA815_15014}
96. MligTC455_33433 512 10.66 Mlig455_007084, Mlig455_015087, Mlig455_027876, Mlig455_033676, Mlig455_041557, Mlig455_044268, Mlig455_048656, Mlig455_058403, Mlig455_063235, Mlig455_068131

Neo: -

Age: Up-Down-Down

 1.772 - - 0.988 - 0.784 -

Mlig455_007084 {REF} {Length: 2774} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=33.2]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_015087 {REF} {Length: 2505} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_027876 {REF} {Length: 776} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_033676 {REF} {Length: 917} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1}

Mlig455_041557 {REF} {Length: 916} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_044268 {REF} {Length: 928} {TRANSSPLICED} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_048656 {REF} {Length: 773} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1}

Mlig455_058403 {REF} {Length: 776} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_063235 {REF} {Length: 1007} {TRANSSPLICED} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_068131 {REF} {Length: 1340} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=35.4]} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1}
97. MligTC455_06776 68 1.41 Mlig455_000689, Mlig455_000745

Neo: -

Age: -

 1.767 - - - - 0.811 0.956

Mlig455_000689 {REF} {Length: 1877} {Pfam: Mitochondrial Myo2 receptor-related protein [PF08505.12, score=19.0]} {RNA1509_21195} {RNA1310_20161.1} {RNA815_26275}

Mlig455_000745 {REF} {Length: 1899} {Pfam: Family of unknown function (DUF5308) [PF17233.4, score=20.9]} {RNA1509_21195} {RNA1310_20161.1} {RNA815_26275}
98. MligTC455_26958 189 3.93 Mlig455_025861

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.270

Region-enriched R4: 3.517/0.00002

 TTLL10 1.766 0.809 0.957 - - - - Mlig455_025861 {REF} {Length: 2020} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=74.6]; YheC/D like ATP-grasp [PF14398.8, score=25.9]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=81.6, Expect=8e-16]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=93.2, Expect=6e-20]} {Dmel: FBgn0031853, TTLL3B, Tubulin tyrosine ligase-like 3B, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=94.0, Expect=2e-20]} {RNA1509_34167, RNA1509_9761} {RNA1310_8353, RNA1509_34167} {RNA1509_34167, RNA815_12498}
99. MligTC455_44727 99 2.06 Mlig455_033185

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.470

 CLCN3 1.763 - - 0.995 - 0.768 - Mlig455_033185 {REF} {Length: 4282} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=304.3]; CBS domain [PF00571.30, score=55.0]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=796, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=766, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=797, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=764, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=783, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=676, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=729, Expect=0.0]} {RNA1509_27287} {RNA1310_201.1, RNA1509_27287} {RNA1509_27287, RNA815_6427.1}
100. MligTC455_02012 3 0.07 Mlig455_053537

Neo: -

Age: -

 1.758 0.952 0.806 - - - - Mlig455_053537 {REF} {Length: 595} {RNA1310_70706} {RNA815_36947}

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