Data search
Results for MligTC455_05568
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_05568 | 10 | 0.21 | Mlig455_029223 | Neo: - Age: - |
Mlig455_029223 {REF} {Length: 190} {NoTransDecoderORF} {RNA1509_36707} {RNA1310_56606} {RNA815_41194.1} |
Cumulative graph for MligTC455_05568
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_05568
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_05568 | 10 | 0.21 | Mlig455_029223 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_029223 {REF} {Length: 190} {NoTransDecoderORF} {RNA1509_36707} {RNA1310_56606} {RNA815_41194.1} | |
| 2. | MligTC455_10699 | 95 | 1.98 | Mlig455_004823, Mlig455_004902, Mlig455_040345 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.373 Region-enriched R2: 5.018/0.04137 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_004823 {REF} {Length: 4645} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.6]; Aspartyl protease [PF13650.8, score=26.9]; Retroviral aspartyl protease [PF00077.22, score=22.2]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=149, Expect=4e-38]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1} Mlig455_004902 {REF} {Length: 4647} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.6]; Aspartyl protease [PF13650.8, score=26.9]; Retroviral aspartyl protease [PF00077.22, score=22.2]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=149, Expect=4e-38]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1} Mlig455_040345 {REF} {Length: 2815} {Pfam: Gag protein p24 C-terminal domain [PF19317.1, score=19.2]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1} |
|
| 3. | MligTC455_26337 | 37 | 0.78 | Mlig455_056972 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_056972 {REF} {Length: 3221} {RNA1310_50367} {RNA815_32658} | |
| 4. | MligTC455_16282 | 41 | 0.85 | Mlig455_057328 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_057328 {REF} {Length: 2363} {NoTransDecoderORF} {RNA1509_37916} {RNA1310_62951} {RNA815_47112} | |
| 5. | MligTC455_10795 | 43 | 0.89 | Mlig455_041800 | Neo: - |
VPS72 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_041800 {REF} {Length: 1668} {TRANSSPLICED} {Pfam: YL1 nuclear protein [PF05764.15, score=55.2]; YL1 nuclear protein C-terminal domain [PF08265.13, score=21.9]} {Human: ENSG00000163159, VPS72, vacuolar protein sorting 72 homolog, [Score=66.6, Expect=2e-11]} {Mouse: ENSMUSG00000008958, Vps72, vacuolar protein sorting 72, [Score=60.8, Expect=1e-09]} {Dmel: FBgn0032321, YL-1, [Score=74.7, Expect=2e-14]} {Smed: dd_Smed_v6_6198_0_1, dd_Smed_v6_6198_0_1, [Score=103, Expect=1e-24]} {RNA1509_3049} {RNA1310_18768} {RNA815_24353} |
| 6. | MligTC455_11899 | 25 | 0.52 | Mlig455_049912 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_049912 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1509_59327} {RNA1310_138888} {RNA815_6259} | |
| 7. | MligTC455_49358 | 121 | 2.52 | Mlig455_036395, Mlig455_042887 | Neo: - Age: - Region-enriched R5: 3.321/0.01476 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_036395 {REF} {Length: 707} {NoTransDecoderORF} {RNA1310_119277} Mlig455_042887 {REF} {Length: 657} {NoTransDecoderORF} {RNA1310_119277} |