M. lignano Tomo-Seq
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Results for MligTC455_05638

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05638 5 0.11 Mlig455_064658, Mlig455_064689

Neo: -

Age: -

Mlig455_064658 {REF} {Length: 117} {NoTransDecoderORF}

Mlig455_064689 {REF} {Length: 137} {NoTransDecoderORF}

Cumulative graph for MligTC455_05638

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_05638

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05638 5 0.11 Mlig455_064658, Mlig455_064689

Neo: -

Age: -

 1 - 1.000 - - - -

Mlig455_064658 {REF} {Length: 117} {NoTransDecoderORF}

Mlig455_064689 {REF} {Length: 137} {NoTransDecoderORF}
2. MligTC455_16497 29 0.61 Mlig455_007796

Neo: Int S/G2/M

Age: -

 0.998 - 0.998 - - - - Mlig455_007796 {REF} {Length: 1192} {RNA1509_58333} {RNA1310_55385.1} {RNA815_38567}
3. MligTC455_28336 869 18.11 Mlig455_011003

Neo: Germline

Age: -

Region-specific R5: 5.986

Region-enriched R5: 4.934/0.00000

 0.997 - 0.997 - - - - Mlig455_011003 {REF} {Length: 279} {NoTransDecoderORF}
4. MligTC455_20924 19 0.39 Mlig455_010192, Mlig455_058692

Neo: -

Age: -

 0.986 - 0.986 - - - -

Mlig455_010192 {REF} {Length: 456} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551}

Mlig455_058692 {REF} {Length: 460} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551}
5. MligTC455_12938 45 0.94 Mlig455_006173

Neo: -

Age: -

Region-enriched R5: 3.537/0.01644

 0.983 - 0.983 - - - - Mlig455_006173 {REF} {Length: 1993} {NoTransDecoderORF} {RNA1310_87441}
6. MligTC455_00418 26 0.54 Mlig455_056079

Neo: -

Age: -

 0.981 - 0.981 - - - - Mlig455_056079 {REF} {Length: 102} {NoTransDecoderORF} {tRNA: Ser(GCT), score=84.7} {RNA1509_11329, RNA1509_38342} {RNA1310_1721.1, RNA1509_11329} {RNA1509_11329, RNA815_17423}
7. MligTC455_28360 184 3.82 Mlig455_011036

Neo: Germline

Age: Down-Up-Down

Region-enriched R5: 5.250/0.00213

 0.971 - 0.971 - - - - Mlig455_011036 {REF} {Length: 283} {NoTransDecoderORF}
8. MligTC455_04912 1059 22.06 Mlig455_057024

Neo: Germline

Age: Up-Down-Down

Region-specific R5: 6.192

Region-enriched R5: 5.309/0.00000

 0.965 - 0.965 - - - - Mlig455_057024 {REF} {Length: 160} {NoTransDecoderORF}
9. MligTC455_06167 9 0.2 Mlig455_016201

Neo: -

Age: -

 0.964 - 0.964 - - - - Mlig455_016201 {REF} {Length: 143} {NoTransDecoderORF} {tRNA: Tyr(GTA), score=73.9} {RNA1509_43566} {RNA1310_83621} {RNA815_43615}
10. MligTC455_32056 153 3.19 Mlig455_016474, Mlig455_037543, Mlig455_037710, Mlig455_042291, Mlig455_042433, Mlig455_052916, Mlig455_054664, Mlig455_055174, Mlig455_061418, Mlig455_063452, Mlig455_070550

Neo: -

Age: -

Region-enriched R5: 4.939/0.00001

 0.959 - 0.959 - - - -

Mlig455_016474 {REF} {Length: 3351} {RNA1509_17965} {RNA1310_21295} {RNA815_18160}

Mlig455_037543 {REF} {Length: 954} {Pfam: Replication protein A OB domain [PF16900.7, score=41.0]; OB-fold nucleic acid binding domain [PF01336.27, score=24.8]; Telomeric single stranded DNA binding POT1/CDC13 [PF02765.19, score=22.4]} {RNA1509_17965} {RNA1310_21295}

Mlig455_037710 {REF} {Length: 356} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=41.3]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=58.5, Expect=3e-11]} {RNA1509_30354} {RNA1310_21295}

Mlig455_042291 {REF} {Length: 1135} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=62.2]; Replication protein A OB domain [PF16900.7, score=48.7]; Telomeric single stranded DNA binding POT1/CDC13 [PF02765.19, score=25.4]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=88.2, Expect=3e-19]} {RNA1509_17965} {RNA1310_21295}

Mlig455_042433 {REF} {Length: 3644} {RNA1509_17965} {RNA1310_21295} {RNA815_20255}

Mlig455_052916 {REF} {Length: 3350} {RNA1509_17965} {RNA1310_21295} {RNA815_18160}

Mlig455_054664 {REF} {Length: 2963} {RNA1509_17965} {RNA1310_21295}

Mlig455_055174 {REF} {Length: 3345} {RNA1509_17965} {RNA1310_21295} {RNA815_18160}

Mlig455_061418 {REF} {Length: 3439} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=62.2]; Replication protein A OB domain [PF16900.7, score=48.7]; Telomeric single stranded DNA binding POT1/CDC13 [PF02765.19, score=25.4]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=88.2, Expect=3e-19]} {RNA1509_17965, RNA1509_42467} {RNA1310_21295, RNA1509_17965, RNA1509_42467} {RNA1509_17965, RNA1509_42467, RNA815_18160}

Mlig455_063452 {REF} {Length: 1038} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=62.2]; Replication protein A OB domain [PF16900.7, score=48.7]; Telomeric single stranded DNA binding POT1/CDC13 [PF02765.19, score=25.4]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=88.2, Expect=3e-19]} {RNA1509_30354} {RNA1310_21295}

Mlig455_070550 {REF} {Length: 1394} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=62.2]; Replication protein A OB domain [PF16900.7, score=48.7]; Telomeric single stranded DNA binding POT1/CDC13 [PF02765.19, score=25.4]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=88.2, Expect=3e-19]} {RNA1509_17965} {RNA1310_21295}
11. MligTC455_38786 52 1.08 Mlig455_012325, Mlig455_052427

Neo: Int S/G2/M

Age: -

 0.951 - 0.951 - - - -

Mlig455_012325 {REF} {Length: 1145} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551}

Mlig455_052427 {REF} {Length: 181} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551}

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