Data search


search
Exact
Search

Results for MligTC455_05738

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05738 10 0.20 Mlig455_049310

Neo: -

Age: -

Mlig455_049310 {REF} {Length: 1224} {NoTransDecoderORF} {RNA1310_136115}

Cumulative graph for MligTC455_05738

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.368 0.59 1.00000 1.00000
RegionR2 1.021 0.59 1.00000 1.00000
RegionR3 -0.084 0.59 1.00000 1.00000
RegionR4 -1.479 0.59 0.99977 1.00000
RegionR5 -0.784 0.59 1.00000 1.00000
RegionR6 -0.396 0.59 1.00000 1.00000
RegionR7 0.696 0.59 1.00000 1.00000
RegionR8 1.393 0.59 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.296 0.59 1.00000 1.00000
RegenerationR2 -0.405 0.59 0.99992 1.00000
RegenerationR3 1.015 0.59 1.00000 1.00000
RegenerationR4 1.628 0.59 1.00000 1.00000
RegenerationR5 1.785 0.59 1.00000 1.00000
RegenerationR6 -0.035 0.59 0.99998 1.00000
RegenerationBL 3.133 0.59 1.00000 1.00000
RegenerationTP -0.755 0.59 1.00000 1.00000


Genes with expression patterns similar to MligTC455_05738

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05738 10 0.2 Mlig455_049310

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_049310 {REF} {Length: 1224} {NoTransDecoderORF} {RNA1310_136115}
2. MligTC455_28971 36 0.74 Mlig455_020333, Mlig455_040969

Neo: -

Age: -

0.963 - - - - 0.963 -

Mlig455_020333 {REF} {Length: 1591} {TRANSSPLICED} {RNA1509_16469} {RNA1310_4476.2} {RNA815_8156}

Mlig455_040969 {REF} {Length: 1285} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.1]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=161, Expect=9e-42]} {RNA1509_16469} {RNA1310_4476.2} {RNA815_8156}
3. MligTC455_28950 25 0.52 Mlig455_009312

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_009312 {REF} {Length: 2343} {RNA1509_47002} {RNA1310_19138.2} {RNA815_7423}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA