M. lignano Tomo-Seq
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Results for MligTC455_05774

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05774 3 0.07 Mlig455_051655

Neo: -

Age: -

 Mlig455_051655 {REF} {Length: 357} {TRANSSPLICED} {NoTransDecoderORF}

Cumulative graph for MligTC455_05774

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_05774

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05774 3 0.07 Mlig455_051655

Neo: -

Age: -

 2 1.000 - - - - 1.000 Mlig455_051655 {REF} {Length: 357} {TRANSSPLICED} {NoTransDecoderORF}
2. MligTC455_06061 7 0.14 Mlig455_003828, Mlig455_033255

Neo: -

Age: -

 PARP4 1.813 0.989 - - - - 0.824

Mlig455_003828 {REF} {Length: 1134} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=77.7]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [Score=64.3, Expect=2e-11]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [Score=66.2, Expect=4e-12]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=50.8, Expect=3e-07]} {RNA1509_37076} {RNA1310_33065.1} {RNA815_15461}

Mlig455_033255 {REF} {Length: 1138} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=77.7]} {Human: ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [Score=64.3, Expect=2e-11]} {Mouse: ENSMUSG00000054509, Parp4, poly (ADP-ribose) polymerase family, member 4, [Score=66.2, Expect=4e-12]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=50.8, Expect=3e-07]} {RNA1509_23765, RNA1509_37076} {RNA1310_33065.1, RNA1509_23765, RNA1509_37076} {RNA1509_23765, RNA1509_37076, RNA815_15461}
3. MligTC455_23443 15 0.32 Mlig455_011642, Mlig455_011684, Mlig455_049907

Neo: -

Age: -

 ATG9A 1.687 0.735 - - - - 0.952

Mlig455_011642 {REF} {Length: 3059} {TRANSSPLICED} {Pfam: Autophagy protein ATG9 [PF04109.18, score=148.4]} {Human: ENSG00000198925, ATG9A, autophagy related 9A, [Score=226, Expect=2e-66]} {Mouse: ENSMUSG00000033124, Atg9a, autophagy related 9A, [Score=227, Expect=1e-66]} {Dmel: FBgn0034110, Atg9, Autophagy-related 9, [Score=182, Expect=1e-50]} {Celegans: WBGene00020706, atg-9, Autophagy-related protein 9, [Score=183, Expect=7e-51]} {Smed: dd_Smed_v6_5369_0_1, dd_Smed_v6_5369_0_1, [Score=130, Expect=8e-33]} {RNA1509_18901} {RNA1310_7222.2} {RNA815_3686}

Mlig455_011684 {REF} {Length: 3465} {TRANSSPLICED} {Pfam: Autophagy protein ATG9 [PF04109.18, score=547.5]} {Human: ENSG00000198925, ATG9A, autophagy related 9A, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000033124, Atg9a, autophagy related 9A, [RH, Score=610, Expect=0.0]} {Dmel: FBgn0034110, Atg9, Autophagy-related 9, [RH, Score=483, Expect=9e-159]} {Celegans: WBGene00020706, atg-9, Autophagy-related protein 9, [RH, Score=451, Expect=2e-145]} {Smed: dd_Smed_v6_5369_0_1, dd_Smed_v6_5369_0_1, [RH, Score=338, Expect=8e-105]} {RNA1509_18901} {RNA1310_7222.2} {RNA815_3686}

Mlig455_049907 {REF} {Length: 3081} {TRANSSPLICED} {Pfam: Autophagy protein ATG9 [PF04109.18, score=545.7]} {Human: ENSG00000198925, ATG9A, autophagy related 9A, [RH, Score=610, Expect=0.0]} {Mouse: ENSMUSG00000033124, Atg9a, autophagy related 9A, [RH, Score=610, Expect=0.0]} {Dmel: FBgn0034110, Atg9, Autophagy-related 9, [RH, Score=481, Expect=4e-158]} {Celegans: WBGene00020706, atg-9, Autophagy-related protein 9, [RH, Score=452, Expect=7e-146]} {Smed: dd_Smed_v6_5369_0_1, dd_Smed_v6_5369_0_1, [RH, Score=343, Expect=1e-106]} {RNA1509_18901, RNA1509_19560} {RNA1310_7222.2, RNA1509_18901, RNA1509_19560} {RNA1509_18901, RNA1509_19560, RNA815_3686}
4. MligTC455_07742 28 0.57 Mlig455_017093

Neo: -

Age: -

 1 - - - - - 1.000 Mlig455_017093 {REF} {Length: 464}
5. MligTC455_16884 10 0.22 Mlig455_017825

Neo: -

Age: -

 1 - - - - - 1.000 Mlig455_017825 {REF} {Length: 735} {NoTransDecoderORF} {RNA1310_64052}
6. MligTC455_07614 39 0.81 Mlig455_022829, Mlig455_022910, Mlig455_022919

Neo: -

Age: Up-Down-Down

 0.973 - - - - - 0.973

Mlig455_022829 {REF} {Length: 304} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46811} {RNA1310_886.2} {RNA815_1557}

Mlig455_022910 {REF} {Length: 230} {NoTransDecoderORF} {RNA1509_46811} {RNA1310_886.2} {RNA815_1557}

Mlig455_022919 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46811} {RNA1310_886.2} {RNA815_1557}
7. MligTC455_25816 6 0.13 Mlig455_006375, Mlig455_038003, Mlig455_038005

Neo: -

Age: -

 NOTCH1, PIF1 0.965 - - - - - 0.965

Mlig455_006375 {REF} {Length: 1376} {Pfam: EGF-like domain [PF00008.29, score=73.9]; Human growth factor-like EGF [PF12661.9, score=30.5]; EGF-like domain [PF07974.15, score=25.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=150, Expect=3e-38]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=153, Expect=2e-39]} {Dmel: FBgn0259685, crb, crumbs, [Score=153, Expect=8e-40]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=128, Expect=3e-31]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=129, Expect=5e-32]} {RNA1509_39306} {RNA1310_29543} {RNA815_693.1}

Mlig455_038003 {REF} {Length: 5339} {Pfam: PIF1-like helicase [PF05970.16, score=324.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]; AAA domain [PF13604.8, score=57.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=115, Expect=9e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=746, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=104, Expect=1e-22]} {RNA1310_14584.2}

Mlig455_038005 {REF} {Length: 5339} {Pfam: PIF1-like helicase [PF05970.16, score=324.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]; AAA domain [PF13604.8, score=57.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=115, Expect=9e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=746, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=104, Expect=1e-22]} {RNA1310_14584.2}
8. MligTC455_21717 38 0.8 Mlig455_017580, Mlig455_058853

Neo: -

Age: -

 KCNC1 0.964 - - - - - 0.964

Mlig455_017580 {REF} {Length: 4770} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=124.3]; BTB/POZ domain [PF02214.24, score=104.7]; Ion channel [PF07885.18, score=36.8]; BTB/POZ domain [PF16017.7, score=23.2]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=357, Expect=2e-113]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=346, Expect=4e-109]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=357, Expect=9e-114]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=400, Expect=1e-131]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=380, Expect=2e-123]} {Smed: dd_Smed_v6_26861_0_1, dd_Smed_v6_26861_0_1, [RH, Score=446, Expect=3e-148]} {RNA1509_17350} {RNA1310_54118} {RNA815_33188}

Mlig455_058853 {REF} {Length: 399} {NoTransDecoderORF} {RNA1310_98941} {RNA815_33188}
9. MligTC455_02345 2 0.04 Mlig455_037856

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_037856 {REF} {Length: 1432} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=44.3]} {Smed: dd_Smed_v6_7249_0_1, dd_Smed_v6_7249_0_1, [Score=84.3, Expect=1e-18]} {RNA1509_35288} {RNA1310_20633} {RNA815_8208}
10. MligTC455_02928 8 0.16 Mlig455_029821

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_029821 {REF} {Length: 253} {NoTransDecoderORF} {RNA1310_125917}
11. MligTC455_05624 1 0.01 Mlig455_010613

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_010613 {REF} {Length: 571} {NoTransDecoderORF} {RNA1310_47226}
12. MligTC455_29492 3 0.06 Mlig455_006012, Mlig455_066584, Mlig455_068087

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_006012 {REF} {Length: 474} {NoTransDecoderORF}

Mlig455_066584 {REF} {Length: 474} {NoTransDecoderORF}

Mlig455_068087 {REF} {Length: 4735} {Pfam: Transposase [PF01498.20, score=19.6]} {RNA1509_19255} {RNA1310_1785} {RNA815_1942}
13. MligTC455_52334 2 0.04 Mlig455_031765

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_031765 {REF} {Length: 678} {NoTransDecoderORF} {RNA1310_21069} {RNA815_14336}
14. MligTC455_38366 13 0.26 Mlig455_061003

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_061003 {REF} {Length: 3813} {RNA1509_45293} {RNA1310_91136} {RNA815_26499}
15. MligTC455_09946 9 0.19 Mlig455_068386

Neo: -

Age: -

 ECE2 0.952 - - - - - 0.952 Mlig455_068386 {REF} {Length: 3943} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=127.5]; Peptidase family M13 [PF01431.23, score=111.7]; Peptidase family M13 [PF05649.15, score=23.9]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=84.0, Expect=1e-15]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=83.6, Expect=1e-15]; ENSG00000276615, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=83.2, Expect=1e-15]; ENSG00000197993, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=83.2, Expect=1e-15]} {Mouse: ENSMUSG00000029866, Kel, Kell blood group, [Score=91.3, Expect=3e-18]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=88.2, Expect=3e-17]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=96.3, Expect=7e-20]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=87.0, Expect=3e-17]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=85.1, Expect=1e-16]} {RNA1310_10797} {RNA815_14357}

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