TomoSeq data search

Data search

Results for MligTC455_05985

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05985

18

0.38

Mlig455_041288

Neo: -

Age: -

Mlig455_041288 {REF} {Length: 454}

Cumulative graph for MligTC455_05985

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.502	0.728	0.99974	1.00000
RegionR2	1.288	0.728	0.99964	1.00000
RegionR3	-0.745	0.728	1.00000	1.00000
RegionR4	-1.07	0.728	0.99957	1.00000
RegionR5	-1.364	0.728	0.99977	1.00000
RegionR6	-0.618	0.728	0.99991	1.00000
RegionR7	1.008	0.728	0.99991	1.00000
RegionR8	0.999	0.728	0.99990	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.685	0.728	0.99975	1.00000
RegenerationR2	3.919	0.728	0.00805	0.14313
RegenerationR3	3.973	0.728	0.03669	0.33885
RegenerationR4	3.09	0.728	0.05187	0.36592
RegenerationR5	3.28	0.728	0.02194	0.25553
RegenerationR6	3.073	0.728	0.05558	0.29571
RegenerationBL	0.033	0.728	0.99977	1.00000
RegenerationTP	3.675	0.728	0.07797	0.44594

Genes with expression patterns similar to MligTC455_05985

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_05985	18	0.38	Mlig455_041288	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_041288 {REF} {Length: 454}
2.	MligTC455_07836	27	0.57	Mlig455_047252	Neo: - Age: -		0.972	-	-	-	-	-	0.972	Mlig455_047252 {REF} {Length: 331} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=40.1} {RNA1509_21228} {RNA1310_20140} {RNA815_31014}
3.	MligTC455_19836	88	1.82	Mlig455_040362	Neo: - Age: -	SLIT1	0.972	-	-	-	-	-	0.972	Mlig455_040362 {REF} {Length: 2535} {Pfam: EGF-like domain [PF00008.29, score=29.0]; Laminin G domain [PF02210.26, score=21.9]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000038048, Cntnap5c, contactin associated protein-like 5C, [Score=54.3, Expect=2e-07]; ENSMUSG00000070695, Cntnap5a, contactin associated protein-like 5A, [Score=52.4, Expect=8e-07]} {Celegans: WBGene00044743, crb-3, Drosophila CRumBs homolog, [Score=50.8, Expect=5e-08]} {Smed: dd_Smed_v6_8336_0_1, dd_Smed_v6_8336_0_1, [Score=47.8, Expect=8e-06]} {RNA1509_35128} {RNA1310_8604} {RNA815_4859}
4.	MligTC455_42645	144	3	Mlig455_012431	Neo: - Age: -	KRT8	0.965	-	-	-	-	-	0.965	Mlig455_012431 {REF} {Length: 3911} {Pfam: Intermediate filament protein [PF00038.23, score=141.4]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.8]; Protein of unknown function (DUF3450) [PF11932.10, score=18.3]} {Human: ENSG00000170421, KRT8, keratin 8, [RH, Score=109, Expect=9e-25]; ENSG00000185640, KRT79, keratin 79, [RH, Score=105, Expect=2e-23]} {Mouse: ENSMUSG00000063661, Krt73, keratin 73, [RH, Score=104, Expect=2e-23]} {Dmel: FBgn0010397, LamC, Lamin C, [Score=138, Expect=2e-34]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [Score=246, Expect=3e-74]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [Score=271, Expect=9e-84]} {RNA1310_10400} {RNA815_12264}
5.	MligTC455_13481	26	0.54	Mlig455_034406, Mlig455_050077	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_034406 {REF} {Length: 976} {NoTransDecoderORF} {RNA1509_47691} {RNA1310_89641} {RNA815_48413} Mlig455_050077 {REF} {Length: 972} {NoTransDecoderORF} {RNA1509_47691} {RNA1310_89641} {RNA815_48413}
6.	MligTC455_06337	14	0.3	Mlig455_061691	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_061691 {REF} {Length: 444} {Pfam: Ribosomal protein S31e [PF17067.7, score=19.5]} {RNA1509_37248} {RNA1310_104355} {RNA815_20899}
7.	MligTC455_10577	22	0.46	Mlig455_044548	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_044548 {REF} {Length: 953} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=26.2]; YscO-like protein [PF16789.7, score=22.3]; Type III secretion protein YscO [PF07321.14, score=18.7]} {RNA1509_56109} {RNA1310_140905} {RNA815_33461}

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