Data search


search
Exact
Search

Results for MligTC455_06056

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06056 25 0.52 Mlig455_032177

Neo: -

Age: -

Mlig455_032177 {REF} {Length: 2568} {Pfam: SAP domain [PF02037.29, score=34.0]; SAP domain-containing new25 [PF18953.2, score=18.2]} {RNA1509_33990} {RNA1310_21330.2} {RNA815_25009.1}

Cumulative graph for MligTC455_06056

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.842 0.973 0.99959 1.00000
RegionR2 5.681 0.973 0.00504 0.06450
RegionR3 -1.604 0.973 0.99962 1.00000
RegionR4 -2.236 0.973 0.99981 1.00000
RegionR5 -1.592 0.973 0.98318 1.00000
RegionR6 -0.513 0.973 0.88503 1.00000
RegionR7 -0.564 0.973 0.99982 1.00000
RegionR8 3.671 0.973 0.14760 0.69985

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.148 0.973 0.99578 1.00000
RegenerationR2 0.996 0.973 0.25231 0.69835
RegenerationR3 5.952 0.973 0.00136 0.06070
RegenerationR4 2.992 0.973 0.01041 0.15475
RegenerationR5 4.49 0.973 0.00047 0.03543
RegenerationR6 4.852 0.973 0.00562 0.09098
RegenerationBL 0.299 0.973 1.00000 1.00000
RegenerationTP 0.124 0.973 0.99966 1.00000


Genes with expression patterns similar to MligTC455_06056

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06056 25 0.52 Mlig455_032177

Neo: -

Age: -

3 1.000 1.000 - - 1.000 - Mlig455_032177 {REF} {Length: 2568} {Pfam: SAP domain [PF02037.29, score=34.0]; SAP domain-containing new25 [PF18953.2, score=18.2]} {RNA1509_33990} {RNA1310_21330.2} {RNA815_25009.1}
2. MligTC455_15241 26 0.55 Mlig455_051200

Neo: -

Age: -

1.94 - 1.000 - - 0.940 - Mlig455_051200 {REF} {Length: 2568} {Pfam: SAP domain [PF02037.29, score=34.0]; SAP domain-containing new25 [PF18953.2, score=18.2]} {RNA1509_35738} {RNA1310_21330.2} {RNA815_25009.1}
3. MligTC455_45100 152 3.16 Mlig455_052606

Neo: Germline

Age: -

Region-enriched R4: 2.964/0.00737

1.8 0.844 0.956 - - - - Mlig455_052606 {REF} {Length: 648} {NoTransDecoderORF} {RNA1310_68303.1} {RNA815_35089}
4. MligTC455_23123 194 4.05 Mlig455_043433

Neo: Germline

Age: Up-Down-Up, logFC(26M/2M)=0.841

Region-specific R4: 5.568

COL6A5 1.706 0.756 0.950 - - - - Mlig455_043433 {REF} {Length: 2567} {Pfam: von Willebrand factor type A domain [PF00092.30, score=88.6]; von Willebrand factor type A domain [PF13519.8, score=23.4]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=50.4, Expect=6e-06]} {Mouse: ENSMUSG00000091345, Col6a5, collagen, type VI, alpha 5, [Score=51.2, Expect=3e-06]} {RNA1509_30571} {RNA1310_8412.1} {RNA815_3042.1}
5. MligTC455_43241 66 1.38 Mlig455_029306

Neo: Germline

Age: logFC(26M/2M)=0.779

DNLZ 1.685 - 0.958 - - 0.727 - Mlig455_029306 {REF} {Length: 1064} {TRANSSPLICED} {Pfam: DNL zinc finger [PF05180.14, score=93.8]; Mitochondrial ATP synthase epsilon chain [PF04627.15, score=71.5]} {Human: ENSG00000213221, DNLZ, DNL-type zinc finger, [RH, Score=94.0, Expect=1e-22]} {Mouse: ENSMUSG00000075467, Dnlz, DNL-type zinc finger, [RH, Score=98.2, Expect=2e-24]} {Dmel: FBgn0030676, CG12379, [RH, Score=96.3, Expect=8e-24]} {Celegans: WBGene00018723, F53A3.7, [RH, Score=85.5, Expect=2e-20]} {Smed: dd_Smed_v6_2816_0_1, dd_Smed_v6_2816_0_1, [RH, Score=73.9, Expect=3e-16]} {RNA1509_38478, RNA1509_54873} {RNA1310_45731.2, RNA1509_54873} {RNA1509_54873, RNA815_23691}
6. MligTC455_27097 90 1.87 Mlig455_061022

Neo: Irradiation

Age: -

ANGPT4 1.668 0.718 0.950 - - - - Mlig455_061022 {REF} {Length: 1017} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=117.9]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=100, Expect=5e-24]; ENSG00000085265, FCN1, ficolin 1, [Score=98.2, Expect=8e-24]; ENSG00000142748, FCN3, ficolin 3, [Score=98.2, Expect=4e-24]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=97.1, Expect=1e-22]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=101, Expect=2e-24]} {Dmel: FBgn0003326, sca, scabrous, [Score=98.2, Expect=3e-23]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=81.6, Expect=7e-18]} {RNA1509_28467} {RNA1310_63232, RNA1509_28467} {RNA1509_28467, RNA815_51687}
7. MligTC455_12557 77 1.59 Mlig455_008709

Neo: Germline

Age: -

1.667 0.708 0.959 - - - - Mlig455_008709 {REF} {Length: 1113} {RNA1310_39017} {RNA815_47038}
8. MligTC455_17274 96 2 Mlig455_040048

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.031/0.00442

LRP2 0.956 - 0.956 - - - - Mlig455_040048 {REF} {Length: 1869} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=131.7]; CUB domain [PF00431.22, score=41.0]} {Human: ENSG00000081479, LRP2, LDL receptor related protein 2, [Score=123, Expect=2e-29]; ENSG00000168702, LRP1B, LDL receptor related protein 1B, [Score=119, Expect=2e-28]} {Mouse: ENSMUSG00000027070, Lrp2, low density lipoprotein receptor-related protein 2, [Score=127, Expect=3e-31]} {Dmel: FBgn0004649, yl, yolkless, [Score=119, Expect=1e-28]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=113, Expect=1e-26]} {Smed: dd_Smed_v6_9829_0_1, dd_Smed_v6_9829_0_1, [Score=91.3, Expect=1e-19]} {RNA1310_15261} {RNA815_6574.1}
9. MligTC455_23446 66 1.38 Mlig455_057726, Mlig455_059960

Neo: -

Age: -

0.953 - - - - 0.953 -

Mlig455_057726 {REF} {Length: 683} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_26363, RNA1509_38641, RNA1509_6499} {RNA1310_19569.1, RNA1509_26363, RNA1509_38641, RNA1509_6499} {RNA1509_26363, RNA1509_38641, RNA1509_6499, RNA815_25365}

Mlig455_059960 {REF} {Length: 673} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_26363} {RNA1310_19569.1} {RNA815_25365}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA