TomoSeq data search

Data search

Results for MligTC455_06447

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_06447	496	10.33	Mlig455_053366	Neo: - Age: -		Mlig455_053366 {REF} {Length: 985} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59012} {RNA1310_35493.1} {RNA815_22379.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_06447

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.224	3.661	0.35631	0.99939
RegionR2	-0.462	3.661	0.34022	0.73248
RegionR3	0.283	3.661	0.45383	0.96484
RegionR4	0.981	3.661	0.02961	0.13468
RegionR5	0.406	3.661	0.25930	0.57955
RegionR6	0.559	3.661	0.14829	0.68695
RegionR7	-0.616	3.661	0.30603	0.94043
RegionR8	0.073	3.661	0.91118	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.485	3.661	0.34193	1.00000
RegenerationR2	-0.031	3.661	0.93117	1.00000
RegenerationR3	-0.627	3.661	0.11664	0.53266
RegenerationR4	-0.617	3.661	0.12849	0.54289
RegenerationR5	-0.942	3.661	0.01478	0.21147
RegenerationR6	-0.854	3.661	0.04013	0.25072
RegenerationBL	0.213	3.661	0.66772	1.00000
RegenerationTP	-0.073	3.661	0.90325	1.00000

Genes with expression patterns similar to MligTC455_06447

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_06447	496	10.33	Mlig455_053366	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053366 {REF} {Length: 985} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59012} {RNA1310_35493.1} {RNA815_22379.1}
2.	MligTC455_32437	602	12.54	Mlig455_025057, Mlig455_025072	Neo: - Age: Up-Down-Down	RNF213	1.696	-	-	-	-	0.954	0.742	Mlig455_025057 {REF} {Length: 4651} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=42.2]; P-loop containing dynein motor region [PF12775.9, score=33.3]; Sigma-54 interaction domain [PF14532.8, score=26.7]; ATPase domain predominantly from Archaea [PF01637.20, score=21.2]; ABC transporter [PF00005.29, score=20.9]; AAA domain [PF13401.8, score=20.4]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=282, Expect=9e-77]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=277, Expect=3e-75]} {Dmel: FBgn0033661, CG13185, [Score=52.0, Expect=4e-06]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=53.1, Expect=1e-06]} {RNA1509_1845} {RNA1310_50.1} {RNA815_2286} Mlig455_025072 {REF} {Length: 9590} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=46.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=42.0]; P-loop containing dynein motor region [PF12775.9, score=28.3]; Sigma-54 interaction domain [PF14532.8, score=24.6]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=374, Expect=3e-103]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=354, Expect=3e-97]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=53.9, Expect=1e-06]} {RNA1509_1845} {RNA1310_50.1} {RNA815_155}
3.	MligTC455_34322	452	9.41	Mlig455_010415	Neo: - Age: logFC(26M/2M)=-0.330	DSP	0.959	-	-	-	-	0.959	-	Mlig455_010415 {REF} {Length: 4635} {Pfam: SH3 domain [PF17902.3, score=27.1]} {Human: ENSG00000096696, DSP, desmoplakin, [Score=58.5, Expect=7e-08]; ENSG00000178209, PLEC, plectin, [Score=57.4, Expect=2e-07]} {Mouse: ENSMUSG00000054889, Dsp, desmoplakin, [Score=58.5, Expect=6e-08]} {Smed: dd_Smed_v6_8220_0_4, dd_Smed_v6_8220_0_4, [Score=89.0, Expect=1e-17]} {RNA1509_10866} {RNA1310_5301} {RNA815_708.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_06447

496

10.33

Mlig455_053366

Neo: -

Age: -

1.000

Mlig455_053366 {REF} {Length: 985} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59012} {RNA1310_35493.1} {RNA815_22379.1}

MligTC455_32437

602

12.54

Mlig455_025057, Mlig455_025072

Neo: -

Age: Up-Down-Down

RNF213

1.696

0.954

0.742

Mlig455_025057 {REF} {Length: 4651} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=42.2]; P-loop containing dynein motor region [PF12775.9, score=33.3]; Sigma-54 interaction domain [PF14532.8, score=26.7]; ATPase domain predominantly from Archaea [PF01637.20, score=21.2]; ABC transporter [PF00005.29, score=20.9]; AAA domain [PF13401.8, score=20.4]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=282, Expect=9e-77]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=277, Expect=3e-75]} {Dmel: FBgn0033661, CG13185, [Score=52.0, Expect=4e-06]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=53.1, Expect=1e-06]} {RNA1509_1845} {RNA1310_50.1} {RNA815_2286}

Mlig455_025072 {REF} {Length: 9590} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=46.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=42.0]; P-loop containing dynein motor region [PF12775.9, score=28.3]; Sigma-54 interaction domain [PF14532.8, score=24.6]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=374, Expect=3e-103]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=354, Expect=3e-97]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=53.9, Expect=1e-06]} {RNA1509_1845} {RNA1310_50.1} {RNA815_155}

MligTC455_34322

452

9.41

Mlig455_010415

Neo: -

Age: logFC(26M/2M)=-0.330

DSP

0.959

Mlig455_010415 {REF} {Length: 4635} {Pfam: SH3 domain [PF17902.3, score=27.1]} {Human: ENSG00000096696, DSP, desmoplakin, [Score=58.5, Expect=7e-08]; ENSG00000178209, PLEC, plectin, [Score=57.4, Expect=2e-07]} {Mouse: ENSMUSG00000054889, Dsp, desmoplakin, [Score=58.5, Expect=6e-08]} {Smed: dd_Smed_v6_8220_0_4, dd_Smed_v6_8220_0_4, [Score=89.0, Expect=1e-17]} {RNA1509_10866} {RNA1310_5301} {RNA815_708.1}